| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 2934673 | 67 (1.190) | 4 (0.080) | 3/92 | NT | 6.3% | coding (434/1776 nt) | fucI | L‑fucose isomerase |
| ? | AP009048 | = 2934691 | 59 (1.160) | coding (452/1776 nt) | fucI | L‑fucose isomerase | |||||
GGCAGCGGCTCTGGCAGCTCACAGCCAGAAAGGCATCCCAGCATTCTCCATTTACGGTCATGACGTTCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/2934602‑2934673‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggaATCGATGTGTCATCGGCATCCTGAACGTCATGACCGTAAATGGAGAATGCTGGGATGCCTTTCTGGCTGT < AP009048/2934691‑2934622 GGCAGCGGCTCTGGCAGCTCACAGCCAGAAAGGCATCCCAGCATTCTCCATTTACGGTCATGACGTTCAG > 1:3813064/1‑70 GCAGCGGCTCTGGCAGCTCACAGCCAGAAAGGCATCCCAGCATTCTCCATTTACGGTCATGACGTTCAGGA > 1:4684682/1‑71 GCAGCGGCTCTGGCAGCTCACAGCCAGAAAGGCATCCCAGCATTCTCCATTTACGGTCATGACGTTCAG < 1:1606032/69‑1 GCAGCGGCTCTGGCAGCTCACAGCCAGAAAGGCATCCCAGCATTCTCCATTTACGGTCATGACGTTCAG < 1:1659524/69‑1 AGCGGCTCTGGCAGCTCACAGCCAGAAAGGCATCCCAGCATTCTCCATTTACGGTCATGACGTTCAG < 1:3778047/67‑1 GGCTCTGGCAGCTCCCAGCCAGAAAGGCATCCCAGCATTCTCCATTTACGGTCATGACGTTCAG > 1:2926433/1‑64 GGCTCTGGCAGCTCACAGCCAGAAAGGCATCCCAGCATTCTCCATTTACGGTCATGACGTTCAGG > 1:1676202/1‑65 TGGCAGCTCACAGCCAGAAAGGCATCCCAGCATTCTCCATTTACGGTCATGACGTTCAGGA > 1:3273657/1‑61 GCTCACAGCCAGAAAGGCATCCCAGCATTCTCCATTTACGGTCATGACGTTCAG < 1:1622118/54‑1 ACAGCCAGAAAGGCATCCCAGCATTCTCCATTTACGGTCATGACGTTCAGGAATCGATGTGTCATCGGCAT < 1:1610738/71‑1 AGAAAGGCATCCCAGCATTCTCCATTTACGGTCATGACGTTCAGGAATCGATGTGTCATCGGCATCCTG < 1:1293184/69‑1 GAAAGGCATCCCAGCATTCTCCATTTACGGTCATGACGTTCAG < 1:2459445/43‑1 AAAGGCATCCCAGCATTCTCCATTTACGGTCATGACGTTCAGGAATCGATGTGTCATCGGCATCCTGAA > 1:1623666/1‑69 AGGCATCCCAGCATTCTCCATTTACGGTCATGACGTTCAGGA > 1:1674971/1‑42 AGGCATCCCAGCATTCTCCATTTACGGTCATGACGTTCAGGA > 1:3235357/1‑42 AGGCATCCCAGCATTCTCCATTTACGGTCATGACGTTCAG < 1:1320598/40‑1 ATCCCAGCATTCTCCATTTACGGTCATGACGTTCAGGAATCGATGTGTCATCGGCATCCTG < 1:2131172/61‑1 CCCAGCATTCTCCATTTACGGTCATGACGTTCAGGA > 1:4945370/1‑36 AGGAATCGATGTGTCATCGGCATCCTGAACGTCATGACCGTAAATGGAGAATGCTGGGATGCCTTTCTGGC > 1:691001/1‑71 AGGAATCGATGTGTCATCGGCATCCTGAACGTCATGACCGTAAATGGAGAATGCTGGGATGCCTTTCTG < 1:3960443/69‑1 AGGAATCGATGTGTCATCGGCATCCTGAACGTCATGACCGTAAATGGAGAATGCTGGGATGCCTTTCT < 1:2434711/68‑1 GGAATCGATGTGTCATCGGCATCCTGAACGTCATGACCGTAAATGGAGAATGCTGGGATGCCTTTCTGGCT < 1:1717829/71‑1 GAATCGATGTGTCATCGGCATCCTGAACGTCATGACCGTAAATGGAGAATGCTGGGATGCCTTTCTGG > 1:4597727/1‑68 GAATCGATGTGTCATCGGCATCCTGAACGTCATGACCGTAAATGGAGAATGCTGGGATGCCTTTCTGG > 1:238800/1‑68 GAATCGATGTGTCATCGGCATCCTGAACGTCATGACCGTAAATGGAGAATGCTGG < 1:754847/55‑1 AATCGATGTGTCATCGGCATCCTGAACGTCATGACCGTAAATGGAGAATGCTGGGATGCCTTTCTGGCTGT < 1:1541622/71‑1 GGCAGCGGCTCTGGCAGCTCACAGCCAGAAAGGCATCCCAGCATTCTCCATTTACGGTCATGACGTTCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/2934602‑2934673‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggaATCGATGTGTCATCGGCATCCTGAACGTCATGACCGTAAATGGAGAATGCTGGGATGCCTTTCTGGCTGT < AP009048/2934691‑2934622 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |