New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AP009048	2222066 =	64 (1.140)	3 (0.060)	3/94	NT	5.2%	coding (750/918 nt)	yehZ	predicted transporter subunit
	?	AP009048	2222089 =	51 (0.980)					coding (727/918 nt)	yehZ	predicted transporter subunit

GGCGCTGGGGCTGCAAACCTTAAGCGATCCGCAAGGTGTGCAACCTATCTACGCGCCTGCACCAGTGGTGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AP009048/2222138‑2222066 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCC  >  AP009048/2222089‑2222158                                                                                                                                                 GGCGCTGGGGCTGCAAACCTTAAGCGATCCGCAAGGTGTGCAACCTATCTACGCGCCTGCACCAGTGGTGC                                                                          >  1:2043204/1‑71  GCGCTGGGGCCGCAAAACTTAAGCGATCCGCAAGGTGTGCAACCTATCTACGCGCCTGCACCAGTGGTGCG                                                                         >  1:1390924/1‑71    GCTGGGGCTGCAAACCTTAAGCGATCCGCAAGGTGTGCAACCTATCTACGCGCCTGCACCAGTGGTGCGT                                                                        >  1:3179566/1‑70    GCTGGGGCTGCAAACCTTAAGCGATCCGCAAGGTGTGCAACCTATCTACGCGCCTGCACCAGTGGTGCGT                                                                        >  1:907811/1‑70             GCAAACCTTAAGCGATCCGCAAGGTGTGCAACCTATCTACGCGACTGCACCAGTGGTGCGT                                                                        >  1:81609/1‑61                                                  TACGCGCCTGCACCAGTGGTGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAA                                         <  1:5079944/55‑1                                                    CGCGCCTGCACCAGTGGTGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTT                                     <  1:231052/57‑1                                                         CTGCACCAGTGGTGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAA                                         >  1:3982411/1‑48                                                                         TAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCC  >  1:4751839/1‑71                                                                                                                                                 GGCGCTGGGGCTGCAAACCTTAAGCGATCCGCAAGGTGTGCAACCTATCTACGCGCCTGCACCAGTGGTGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AP009048/2222138‑2222066 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAGTGCC  >  AP009048/2222089‑2222158

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.