| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 1455472 | 57 (1.010) | 4 (0.080) | 3/96 | NT | 7.6% | intergenic (‑116/‑169) | maoC/paaA | fused aldehyde dehydrogenase and enoyl‑CoA hydratase/predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation |
| ? | AP009048 | = 1455497 | 43 (0.810) | intergenic (‑141/‑144) | maoC/paaA | fused aldehyde dehydrogenase and enoyl‑CoA hydratase/predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation | |||||
ATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/1455400‑1455472‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaTCATTATTTATCAGTGCATTAATGTTTTCCGCAGTTGCTATACAGATCGCATAGTTAACATTTCGTTA < AP009048/1455497‑1455430 ATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGA < 1:3881266/71‑1ATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGA < 1:5118699/71‑1 CGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAA > 1:1228910/1‑70 GCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAA < 1:2569664/70‑1 AAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTATTTATCAGTGCA > 1:2104784/1‑71 TTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAATCATTATTTATCAGTGCATTAATGTT < 1:647153/70‑1 TTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAAACATTATTTATCAGTGCATTAATGTT < 1:303227/70‑1 GATCTGTATAGCAACTGCGGAAATCATTATTTATCAGTGC < 1:4425051/40‑1 AATCATTATTTATCAGTGCATTAATGTTTTCCGCAGTTGCTATACAGATCGCATAGTTAACATTTCGTTA < 1:2829579/70‑1 AATCATTATTTATCAGTGCATTAATGTTTTCCGCAGTTGCTATACAGATCGCATAGTTAACATT < 1:1070362/64‑1 ATCGCGAATCATAAAAAGCAAAGGATCTTTTAACGAAATGTTAACTATGCGATCTGTATAGCAACTGCGGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/1455400‑1455472‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaTCATTATTTATCAGTGCATTAATGTTTTCCGCAGTTGCTATACAGATCGCATAGTTAACATTTCGTTA < AP009048/1455497‑1455430 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |