New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AP009048 | 952526 = | 66 (1.170) | 4 (0.090) | 4/82 | NT | 7.3% | coding (1451/2283 nt) | pflB | pyruvate formate lyase I |
? | AP009048 | 952557 = | 48 (1.060) | coding (1420/2283 nt) | pflB | pyruvate formate lyase I |
AGGTTGGTCCGAAGTCTGAACCGATCAAAGGCGATGTCCTGAACTATGATGAAGTGATGGAGCGCATGGATCACTTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/952604‑952526 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcacttcatCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGTTTTTCGTCAA > AP009048/952557‑952625 AGGTTGGTCCGAAGTCTGAACCGATCAAAGGCGATGTCCTGAACTATGATGAAGTGATGGAGCGCATGGAT > 1:1066778/1‑71 AGGTTGGTCCGAAGTCTGAACCGATCAAAGGCGATGTCCTGAACTATGATGAAGTGATGGAGCGCATGGAT < 1:342715/71‑1 GTTGGTCCGAAGTCTGAACCGATCAAAGGCGATGTCCTGAACTATGATGAAGTGATGGAGCGCATGGATCA > 1:5127151/1‑71 TGGTCCGAAGTCTGAACCGATCAAAGGCGATGTCCTGAACTATGATGAAGTGATGGAGCGCATGGATCACT > 1:3707190/1‑71 GTCCGAAGTCTGAACCGATCAAAGGCGATGTCCTGAACTATGATGAAGTGATGGAGCGCATGGATCACTTC < 1:2945160/71‑1 GTCCGAAGTCTGAACCGATCAAAGGCGATGTCCTGAACTATGATGAAGTGATGGAGCGCATGGATCACTTC < 1:4560939/71‑1 TCCGAAGTCTGAACCGATCAAAGGCGATGTCCTGAACTATGATGAAGTGATGGAGCGCATGGATCACTTCA > 1:1458351/1‑71 TCCGAAGTCTGAACCGATCAAAGGCGATGTCCTGAACTATGATGAAGTGATGGAGCGCATGGATCACT < 1:684125/68‑1 CGAAGTCTGAACCGATCAAAGGCGATGTCCTGAACTATGATGAAGTGATGGAGCGCATGGATCACTTCAT < 1:1514335/70‑1 CGAAGTCTGAACCGATCAAAGGCGATGTCCTGAACTATGATGAAGTGATGGAGCGCATGGATCA > 1:3961256/1‑64 AAGTCTGAACCGATCAAAGGCGATGTCCTGAACTATGATGAAGTGATGGAGCGCATGGATCACTTC > 1:3141673/1‑66 TCTGAACCGATCAAAGGCGATGTCCTGAACTATGATGAAGTGATGGAGCGCATGGATCACTT < 1:3225377/62‑1 ACCGATCAAAGGCGATGTCCTGAACTATGATGAAGTGATGGAGCGCATGGATCACT > 1:139655/1‑56 CCGATCAAAGGCGATGTCCTGAACTATGATGAAGTGATGGAGCGCATGGATCACTTCAT > 1:4476823/1‑59 TGTCCTGAACTATGATGAAGTGATGGAGCGCATGGATCA > 1:1384552/1‑39 GAAGTGATGGAGCGCATGGATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGAC > 1:2059175/1‑71 GAAGTGATGGAGCGCATGGATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCG < 1:2260106/68‑1 GAGCGCATGGATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCA < 1:2336535/71‑1 AGCGCATGGATCACTTCATCATAGTTCAGGACATCGCCTTT > 1:3383845/1‑41 ATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGT > 1:548153/1‑69 ATCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTG < 1:2686649/59‑1 TCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGTTTT < 1:3187173/71‑1 TCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGG < 1:959301/49‑1 TCACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTC > 1:3396069/1‑47 CACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCT < 1:4970485/56‑1 ACTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGTTTTTC > 1:1488615/1‑71 CTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCG < 1:1423563/45‑1 CTTCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTC < 1:4514370/44‑1 TCATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGTTTTTC > 1:705571/1‑68 ATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGTTTTTCGTCAA > 1:599586/1‑71 ATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGTTTTTCGTCAA > 1:1290991/1‑71 ATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGTTTTTCGTCA < 1:3147219/70‑1 ATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGTTTTTCGTCA < 1:2878793/70‑1 ATCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGTTTTTCGTCA < 1:178239/70‑1 AGGTTGGTCCGAAGTCTGAACCGATCAAAGGCGATGTCCTGAACTATGATGAAGTGATGGAGCGCATGGATCACTTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/952604‑952526 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcacttcatCATAGTTCAGGACATCGCCTTTGATCGGTTCAGACTTCGGACCAACCTGCATTTTCAGTTTTTCGTCAA > AP009048/952557‑952625 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |