| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 71653 = | 80 (1.420) | 4 (0.090) | 4/84 | NT | 6.1% | coding (303/765 nt) | yabI | conserved inner membrane protein |
| ? | AP009048 | 71685 = | 58 (1.250) | coding (335/765 nt) | yabI | conserved inner membrane protein | |||||
GCACCAGCGGACGCGTCGGGCCAACAAAACGACCGACCAGAATGGTGAACATGCTGTGTTGATGCAACGCATGTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/71729‑71653‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatgttcaCCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCT > AP009048/71685‑71754 GCACCAGCGGACGCGTCGGGCCAACAAAACGACCGACCAGAATGGTGAACATGCTGTGTTGATGCAACGCA < 1:3929580/71‑1 CAGCGGACGCGTCGGGCCAACAAAACGACTGACCAGAATGGTGAACATGCTGTGTTGATGCAACGCATGTT > 1:3520292/1‑71 CAGCGGACGCGTCGGGCCAACAAAACGACCGACCAGAATGGTGAACATGCTGTGTTGATGCAACGCTTGTg > 1:3815735/1‑70 CGGGCCAACAAAACGACCGACCAGAATGGTGAACATGCTGTGTTGATGCAACGCATGT > 1:852111/1‑58 ACAAAACGACCGACCAGAATGGTGAACATGCTGTGTTGATGCAACGCA > 1:3254292/1‑48 AAAACGACCGACCAGAATGGTGAACATGCTGTGTTGATGCAACG < 1:403606/44‑1 CCAGAATGGTGAACATGCTGTGTTGATGCAACGCATGTTCACCATTCTGGTCGGTCGTTTTGTTGGCCCGA > 1:655399/1‑71 AACATGCTGTGTTGATGCAACGCATGTTCACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTG > 1:259227/1‑71 GCTGTGTTGATGCAACGCATGTTCACCATTCTGGTCGGTC > 1:1624372/1‑40 TGTGTTGATGCAACGCATGTTCACCATTCTGGTCGGTCGTTTTGT > 1:2183279/1‑45 CATGTTCACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATG < 1:3950623/58‑1 ATGTTCACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGC < 1:2561461/70‑1 GTTCACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTG < 1:354543/70‑1 TTCACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGG < 1:114517/70‑1 TCACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTC > 1:333216/1‑39 ACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCT < 1:2603191/71‑1 ACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCT > 1:64152/1‑71 GCACCAGCGGACGCGTCGGGCCAACAAAACGACCGACCAGAATGGTGAACATGCTGTGTTGATGCAACGCATGTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/71729‑71653‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatgttcaCCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCT > AP009048/71685‑71754 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |