| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 384735 = | 100 (1.360) | 8 (0.130) | 3/84 | NT | 11.2% | intergenic (+125/‑56) | ybdB/cstA | conserved hypothetical protein/carbon starvation protein |
| ? | Exported | 384764 = | 43 (0.700) | intergenic (+154/‑27) | ybdB/cstA | conserved hypothetical protein/carbon starvation protein | |||||
GGTATTTCCCTGATTTGTTCATAGTTGTTATCCGTGTGCGTGTCCATAGAGATGTTACATTTTGTTTCTATAACATCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/384812‑384735‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taacatctCTATGGACACGCACACGGATAACAACTATGAACAAATCAGGGAAATACCTCGTCTGGACAGTGCTCTCT > Exported/384764‑384832 GGTATTTCCCTGATTTGTTCATAGTTGTTATCCGTGTGCGTGTCCATAGAGATGTTACATTTTGTTTCTAT < 1:131311/71‑1 ATTTCCCTGATTTGTTCATAGTTGTTATCCGTGTGCGTGTCCATAGAGATGTTACATTTTGTTTCTATAA > 1:1724763/1‑70 CCTGATTTGTTCATAGTTGTTATCCGTGTGCGTGTCCATAGAGATGTTACATTTTGTTTCTATAACATCT < 1:335741/70‑1 CCTGATTTGTTCATAGTTGTTATCCGTGTGCGTGTCCATAGAGATGTTACATTTTGTTTCTATAACATCT < 1:2531839/70‑1 CCTGATTTGTTCATAGTTGTTATCCGTGTGCGTGTCCATAGAGATGTTACATTTTGTTTCTATAACATCT < 1:1779796/70‑1 TTACATTTTGTTTCTATAACATCTCTATGGACACGCACACGGATAACAACTATGAACA < 1:307803/58‑1 TTACATTTTGTTTCTATAACATCTCTATGGACACGCACACGGATAACAACTATGAACA < 1:2840498/58‑1 TTACATTTTGTTTCTATAACATCTCTATGGACACGCACACGGATAACAACTATGAACA < 1:4164263/58‑1 ACATTTTGTTTCTATAACATCTCTATGGACACGCACACGGATAACAACTATGAACAAA > 1:1007514/1‑58 ACATTTTGTTTCTATAACATCTCTATGGACACGCACACGGATAACAACTATGAACAAA > 1:4131834/1‑58 ACATTTTGTTTCTATAACATCTCTATGGACACGCACACGGATAACAACTATGAACAAA > 1:4319093/1‑58 ATTTTGTTTCTATAACATCTCTATGGACACGCACACGGATAACAACTATGAATAAATCAGGGAAATAC > 1:1973777/1‑68 ATTTTGTTTCTATAACATCTCTATGGACACGCACACGGATAACAACTATGAACAAATCAGGGAAATAC > 1:3774080/1‑68 CATCTCTATGGACACGCACACGGATAACAACTATGAATAAATCAGGGAAATACCTCGTCTGGACAGTGCTC > 1:3889003/1‑71 CATCTCTATGGACACGCACACGGATAACAACTATGAACAAATCAGGGAAATACCTCGTCTGGACAGTGCTC > 1:211063/1‑71 CATCTCTATGGACACGCACACGGATAACAACTATGAACAAATCAGGGAAATACCTCGTCTGGACAGTGCTC < 1:2236400/71‑1 CATCTCTATGGACACGCACACGGATAACAACTATGAACAAATCAGGGAAATACCTCGTCTGGACAGTGCTC > 1:569118/1‑71 ATCTCTATGGACACGCACACGGATAACAACTATGAACAAATCAGGGAAATACCTCGTCTGGACAGTGCTCT > 1:3462593/1‑71 ATCTCTATGGACACGAACACGGATAACAACTATGAACAAATCAGGGAAATACCTCGTCTGGACAGTGCTCT > 1:3203683/1‑71 TCTCTATGGACACGCACACGGATAACAACTATGAACAAATCA > 1:342800/1‑42 TCTCTATGGACACGCACACGGATAACAACTATGAACAAATCA > 1:839538/1‑42 CTCTATGGACACGCACACGGATAACAACTATGAACAAA > 1:3171103/1‑38 CTCTATGGACACGCACACGGATAACAACTATGAACAAA > 1:2757210/1‑38 CTCTATGGACACGCACACGGATAACAACTATGAACAAA > 1:3588005/1‑38 CTCTATGGACACGCACACGGATAACAACTATGAACAAA > 1:2218470/1‑38 CTCTATGGACACGCACACGGATAACAACTATGAACAAA > 1:1696770/1‑38 CTCTATGGACACGCACACGGATAACAACTATGAACAAA > 1:164057/1‑38 CTCTATGGACACGCACACGGATAACAACTATGAACAAA > 1:1632544/1‑38 CTCTATGGACACGCACACGGATAACAACTATGAACAAA > 1:4633035/1‑38 CTCTATGGACACGCACACGGATAACAACTATGAACAAA > 1:1409877/1‑38 TCTATGGACACGCACACGGATAACAACTATGAACAAATCAGGGAAATACCTCGTCTGGACAGTGCTCTCT > 1:3640773/1‑70 TCTATGGACACGCACACGGATAACAACTATGAACAAATCA > 1:2551708/1‑40 TCTATGGACACGCACACGGATAACAACTATGAACAAATCA > 1:1295095/1‑40 GGTATTTCCCTGATTTGTTCATAGTTGTTATCCGTGTGCGTGTCCATAGAGATGTTACATTTTGTTTCTATAACATCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/384812‑384735‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taacatctCTATGGACACGCACACGGATAACAACTATGAACAAATCAGGGAAATACCTCGTCTGGACAGTGCTCTCT > Exported/384764‑384832 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |