| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 1016506 | 38 (0.760) | 4 (0.090) | 3/88 | NT | 9.7% | coding (387/519 nt) | fabA | beta‑hydroxydecanoyl thioester dehydrase |
| ? | AP009048 | = 1016516 | 42 (0.970) | coding (377/519 nt) | fabA | beta‑hydroxydecanoyl thioester dehydrase | |||||
CAGACGACCATCAACCAGCACTTCGCCATCCGCCAGGCCCATAATCAGACGACGGTTAACAATGCGTTTAAAGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/1016431‑1016506‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagtgaCCTACCGTATTCACTTTAAACGCATTGTTAACCGTCGTCTGATTATGGGCCTGGCGGATGGCGAAGTGCT < AP009048/1016516‑1016447 CAGACGACCATCAACCAGCACTTCGCCATCCGCCAGGCCCATAATCAGACGACGGTTAACAATGCGTTTA > 1:1536466/1‑70 GACCATCAACCAGCACTTCGCCATCCGCCAGGCCCATAATCAGACGACGGTTAACAATGCGTTTAAAGTG > 1:879622/1‑70 GACCATCAACCAGCACTTCGCCATCCGCCAGGCCCATAATCAGACGACGGTTAACAATGAGTTTAAAGTG > 1:804472/1‑70 ACCAGCACTTCGCCATCCGCCAGGCCCATAATCAGACGACGGTTAACAATGCGAAAAAAGTGACCTACCGT < 1:1575846/71‑1 CAGCACTTCGCCATCCGCCAGGCCCATAATCAGACGACGGTTAACAATGCGTTTAAA < 1:1506303/57‑1 AGCACTTCGCCATCCGCCAGGCCCATAATCAGACGACGGTTAACAATGCGTTTAAA > 1:2353004/1‑56 AGCACTTCGCCATCCGCCAGGCCCATAATCAGACGACGGTTAACAATGCGTTTAAA > 1:449961/1‑56 ACTTCGCCATCCGCCAGGCCCATAATCAGACGACGGTTAACAATGCGTTTAA < 1:1799019/52‑1 TTCGCCATCCGCCAGGCCCATAATCAGACGACGGTTAACAATGCGTTTAAAGTG < 1:2269669/54‑1 TTCGCCATCCGCCAGGCCCATAATCAGACGACGGTTAACAATGCGTTTAAAG > 1:1088893/1‑52 TCGCCATCCGCCAGGCCCATAATCAGACGACGGTTAACAATGCGTTTAAAGT > 1:1987542/1‑52 CATCCGCCAGGCCCATAATCAGACGACGGTTAACAATGCGTTTAAAGTG < 1:4281908/49‑1 TCCGCCAGGCCCATAATCAGACGACGGTTAACAATGCGTTTA < 1:3602951/42‑1 TCCGCCAGGCCCATAATCAGACGACGGTTAACAATGCGTTTA < 1:3627333/42‑1 CGCCAGGCCAATAATCAGACGACGGTTAACAATGCGTTTAAAGTGACCTACCGTATTCACTTTA < 1:1863624/64‑1 CCAGGCCCATAATCAGACGACGGTTAACAATGCGTTTAAAGTGACCTACCGTATTCACTTTAAA > 1:1679782/1‑64 CCAGGCCCATAATCAGACGACGGTTAACAATGCGAAAAAAGTGACCTACCGTATTCACTTTA < 1:1562911/62‑1 GGCCCATAATCAGACGACGGTTAACAATGCGTTTA < 1:2528887/35‑1 AAAGTGACCTACCGTATTCACTTTAAACGCATTGTTAACCGTCGTCTGATTATGTGCCTGGCGGATGGCG > 1:2301373/1‑70 AAAGTGACCTACCGTATTCACTTTAAACGCATTGTTAACCGTCGTCTGATTATGGGCCTGGCGGATGGCGA < 1:58455/71‑1 AAAGTGACCTACCGTATTCACTTTAAACGCATTGTTAACCGTCGTCTGATTATGGGCCT < 1:1403648/59‑1 AAAGTGACCTACCGTATTCACTTTAAACGCATTGTTAACCGTCGTCTGATTATGGGCCT < 1:4056488/59‑1 AAAGTGACCTACCGTATTCACTTTAAACGCATTGTTAACCGT > 1:3179025/1‑42 GTGACCTACCGTATTCACTTTAAACGCATTGTTAACCGTCGTCTGATTATGGGCCTGGCGGATGGCGAAGT > 1:3278197/1‑71 TGACCTACCGTATTCACTTTAAACGCATTGTTAACCGT < 1:2168493/38‑1 ACCTACCGTATTCACTTTAAACGCATTGTTAACCGTCGTCTGATTATGGGCCTGGCGGATGGCGAAGTGCT < 1:4166096/71‑1 ACCTACCGTATTCACTTTAAACGCATTGTTAACCGTCGTCTGATTATGGGCCTGGCGGATGGCGAAGTGCT > 1:2427752/1‑71 ACCTACCGTATTCACTTTAAACGCATTGTTAACCGTCGTCTGATTATGGGCCTGGCGGATGGCGAAGTGCT > 1:1523006/1‑71 CAGACGACCATCAACCAGCACTTCGCCATCCGCCAGGCCCATAATCAGACGACGGTTAACAATGCGTTTAAAGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/1016431‑1016506‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagtgaCCTACCGTATTCACTTTAAACGCATTGTTAACCGTCGTCTGATTATGGGCCTGGCGGATGGCGAAGTGCT < AP009048/1016516‑1016447 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |