| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 242249 | 95 (1.300) | 9 (0.130) | 3/92 | NT | 9.0% | coding (1974/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent |
| ? | Exported | = 242319 | 92 (1.310) | coding (1904/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent | |||||
TGGCGTTGCTGCCAGCTCTGCGCTTCTTGCTGACGTGTCGCCAACCAGCTCTCTTCTTCATCTTCCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/242181‑242249‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGACATT < Exported/242319‑242274 TGGCGTTGCTGCCAGCTCTGCGCTTCTTGCTGACGTGTCGCCAACCAGCTCTCTTCTTCATCTTCCTGT > 1:4332389/1‑69TGGCGTTGCTGCCAGCTCTGCGCTTCTTGCTGACGTGTCGCCAACCAGCTCTCTTCTTCATCTTCCTGT > 1:3713707/1‑69TGGCGTTGCTGCCAGCTCTGCGCTTCTTGCTGACGTGTCGCCAACCAGCTCTCTTCTTCATCTTCCTGT > 1:2118779/1‑69TGGCGTTGCTGCCAGCTCTGCGCTTCTTGCTGACGTGTCGCCAACCAGCTCTCTTCTTCATCTTCCTGT > 1:3261642/1‑69 AGCTCTCTTCTTCATTATCCAGTATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGA < 1:2129588/65‑1 CTCTCTTCTTCATCTTCCTGTATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGACA > 1:5144593/1‑65 CTCTCTTCTTCATCTTCCTGTATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGACA > 1:4362331/1‑65 CTCTCTTCTTCATCTTCCTGTATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGACA > 1:2587984/1‑65 TTCTTCATCTTCCTGTATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGACATT > 1:696278/1‑62 TTCTTCATCTTCCTGTATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGACATT > 1:4023281/1‑62 TTCTTCATCTTCCTGTATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGACATT > 1:3239945/1‑62 TTCTTCATCTTCCTGTATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGACATT > 1:2110903/1‑62 TTCTTCATCTTCCTGTATCAACAGCAAATTGAACAACGCCAG > 1:4754905/1‑42 GTATCAACAGCAAATTGAACAACGCCAGCAACTACTTTT < 1:1497337/39‑1 GTATCAACAGCAAATTGAACAACGCCAGCAACTACTTTT < 1:2883444/39‑1 GTATCAACAGCAAATTGAACAACGCCAGCAACTACTTTT < 1:1503412/39‑1 GTATCAACAGCAAATTGAACAACGCCAGCAACTACTTTT < 1:4838516/39‑1 GTATCAAAAGCAAATTGAACAACGCCAGCAACTACTTTT < 1:2844434/39‑1 TATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGACA > 1:1518036/1‑45 TATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGACA > 1:581091/1‑45 TATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGACA > 1:5100205/1‑45 TATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGACA > 1:502324/1‑45 TATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGACA > 1:4390672/1‑45 TATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGACA > 1:1526879/1‑45 TATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGACA > 1:4174670/1‑45 TATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGACA > 1:1924382/1‑45 TATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGACA > 1:3645484/1‑45 TATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGACA > 1:3182421/1‑45 TATCAACAGCAAATTGAACAACGCCAGCAACTACTTTT < 1:3041722/38‑1 TGGCGTTGCTGCCAGCTCTGCGCTTCTTGCTGACGTGTCGCCAACCAGCTCTCTTCTTCATCTTCCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/242181‑242249‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGACATT < Exported/242319‑242274 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |