Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | DH1 | 3,557,412 | 0 | T | C | 53.8% | 110.2 / inf | 463 | intergenic (‑814/‑301) | ECDH1_RS17595/ykgR | attachment protein/hypothetical protein |
Reads supporting (aligned to +/- strand): ref base T (123/91); new base C (134/115); total (257/206) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.54e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.63e-02 |
Only 100 of 490 total aligned reads displayed.
TAAAACTATCAAATCAATGAGTAACCGATACAGCCTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTGAGATCAGACTCATTCCCGGAACTGACTTCAGGCG > DH1/3557262‑3557560 | tAAAACTATCAAATCAATGAGTAACCGATACAGTCTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATACTTGACGGTTTAATAGAACTCAAttt > 2:1298397/1‑151 (MQ=255) tAAAACTATCAAATCAATGAGTAACCGATACAGCCTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAAttt > 6:1807952/1‑151 (MQ=255) aaacCTATCAAATCAATGAGTAACCGATACAGCCTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAAttt < 8:1172907/150‑1 (MQ=255) aaaaCTATCAAATCAATGAGTAACCGATACAGCCTCACAAATTCTTTCAGATAATTAACCCGTCACTGAGGCACGTTCTCTCATAAGGCGTGCCTGCAGAGTAATCCAGTATGTATCCGGCATAGTTGAAGGTTTAATAGAACTCAAtttg > 2:487725/1‑150 (MQ=255) aCTATCAAATCAATGAGTAACCGATACAGCCTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTtctct < 7:1224125/151‑1 (MQ=255) atATCAAATCAATGAGTAACCGATACAGCCTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTtctctc < 3:1652333/150‑1 (MQ=255) caaatcaaTGAGTAACCGATACAGCCTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCa < 2:1866496/150‑1 (MQ=255) caaatcaaTGAGTAACCGATACAGCCTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAg < 4:560883/151‑1 (MQ=255) tcaaTGAGTAACCGATACAGCCTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTc > 6:708720/1‑150 (MQ=255) tGAGTAACCGATACAGCCTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCATCTCCCAGGTCACca > 2:1421404/1‑150 (MQ=255) gAGTAACCGATACAGCCTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACcaac < 4:1829151/151‑1 (MQ=255) aaCCGATACAGCCTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCaacaac < 6:406711/150‑1 (MQ=255) aaCCGATACAGCCTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACg > 3:392626/1‑151 (MQ=255) aaCCGATACAGCCTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCaacaac < 3:974278/150‑1 (MQ=255) aCCGATACAGCCTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGa < 6:10341/151‑1 (MQ=255) aCCGATACAGCCTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGa < 5:175536/151‑1 (MQ=255) ccGATACAGCCTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGAAGTGTAATCCAGTATGTATCACGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGat > 2:339800/1‑151 (MQ=255) aCAGCCTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCt < 6:1576962/150‑1 (MQ=255) ccTCAGAAATTCTTTCTGATAATTAAGCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGtat < 8:1550610/151‑1 (MQ=255) ccTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGtat > 4:1364875/1‑151 (MQ=255) ccTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGtat < 4:1012495/151‑1 (MQ=255) cTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGtat > 4:1257958/1‑150 (MQ=255) tCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGtata > 7:80921/1‑150 (MQ=255) cacaAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAac < 1:829683/151‑1 (MQ=255) caAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAacac > 8:641499/1‑151 (MQ=255) aTTCTTTCAGATAATTAACCCGTCACTGCTGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAAAGATATCTTGTATAACAccca < 6:335661/151‑2 (MQ=255) ttCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACAcccc > 8:1403032/1‑150 (MQ=255) cTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAgg > 1:1549867/1‑151 (MQ=255) cAGATAATTCACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCTGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGAt < 7:1157584/151‑1 (MQ=255) aGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATTGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGAt > 8:370504/1‑150 (MQ=255) aGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATa < 4:431390/151‑1 (MQ=255) aGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATa < 7:606805/151‑1 (MQ=255) aGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTAACAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGAt > 8:1107618/1‑150 (MQ=255) gATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGGAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATAc < 2:875940/151‑1 (MQ=255) gataTTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACg > 5:1860186/4‑151 (MQ=255) aTAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGCCGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACg > 3:585213/1‑151 (MQ=255) aTAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACg < 8:1756990/151‑1 (MQ=255) aaTTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGAc > 6:846328/1‑151 (MQ=255) aaTTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGa < 5:330213/150‑1 (MQ=255) tAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATGCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACAt < 8:1241409/150‑1 (MQ=255) tAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACAtt > 1:43122/1‑151 (MQ=255) tAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACAt < 3:1437383/150‑1 (MQ=255) aatctgTCTCTGCGGCAGGTTGTCTCATAAGGGGTGGCTGCAGTGTAATCTAGTATGTATTCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCAGCAACAACGATATCTTGTATAAGAGCCGAGGAGATACGACAtt < 6:879123/145‑1 (MQ=255) aaCCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACAtt < 4:1176004/150‑1 (MQ=255) aaCCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACAtt < 7:698728/150‑1 (MQ=255) cccGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTatg > 2:1145153/1‑151 (MQ=255) cccGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTatg > 2:681858/1‑151 (MQ=255) gTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTatgatg > 8:708989/1‑151 (MQ=255) tCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTatgatg > 4:884523/1‑150 (MQ=255) tCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTatgatg > 7:1694014/1‑150 (MQ=255) cACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTatgatg > 5:597722/1‑149 (MQ=255) cTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTatgatg > 3:117472/1‑147 (MQ=255) cTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTatgatg > 7:1355094/1‑147 (MQ=255) cACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGat > 7:1056751/1‑150 (MQ=255) aCGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGatat < 3:1289801/151‑1 (MQ=255) gTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGc > 7:1491913/1‑151 (MQ=255) tctctcATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGctc > 1:1156750/1‑151 (MQ=255) ctcATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATCCGATATGctcct > 6:115372/1‑150 (MQ=255) ctcATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGctcctc > 4:1562453/1‑151 (MQ=255) cATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGctcctc > 3:774919/1‑149 (MQ=255) aaGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCa < 5:544254/150‑1 (MQ=255) ggCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCa < 2:558815/151‑1 (MQ=255) gTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCATCACCAATc > 7:387950/1‑151 (MQ=255) tGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATc > 3:1827352/1‑150 (MQ=255) gCCTGCAGTGTAATCGAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCa < 5:489164/150‑1 (MQ=255) ccTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCGGCACCAATCAAc > 8:1913087/1‑151 (MQ=255) cAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCACCACCAATCAACGccc > 8:1209259/1‑151 (MQ=255) aGTGTAATCCAGTATGTATCCGGCATAGTTGACGTTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCg < 5:896012/151‑1 (MQ=255) aGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCg < 5:1230242/151‑1 (MQ=255) aGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCg > 1:1727780/1‑151 (MQ=255) aTCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCACAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTgg > 4:1425678/1‑151 (MQ=255) aTCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTgg < 7:1770558/151‑1 (MQ=255) tCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTggg > 1:1341230/1‑151 (MQ=255) cAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGcc > 4:1721480/1‑151 (MQ=255) gtatgtatCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGcc > 4:667080/1‑149 (MQ=255) atgtatCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTc > 3:269437/1‑151 (MQ=255) atgtatCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGt < 3:1011666/150‑1 (MQ=255) atgtatCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTc > 6:476180/1‑151 (MQ=255) atCCGGCATAGTTGACGGTTTAATAGAACTCAATTCCTCTCCCACGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTg < 7:876451/150‑1 (MQ=255) tCCGCCATAGTAGACGGTTTAATAGAACTCAATTTCTCTCCCAGCTCACCAACAACGATATCTTCTATAACACCCCACGAGATACGACATTATCATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGCACTGCGCCAGACttaa > 6:1862565/1‑148 (MQ=255) cGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTg > 6:1255197/1‑147 (MQ=255) ggCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTg > 3:512220/1‑146 (MQ=255) aGTTGACGGTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTGAGATCAGACt < 8:831577/151‑1 (MQ=255) tGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTGAGATCAGACTCa < 4:291398/150‑1 (MQ=255) gTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTGAGATCAGACTCATTCCCg > 1:1062469/1‑151 (MQ=255) gTTTAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTGAGATCAGACTCATTCCCg > 5:1671248/1‑151 (MQ=255) ttAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTGAGATCAGACTCATTCCCgg < 2:800589/150‑1 (MQ=255) ttAATAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTGAGATCAGACTCATTCCCgg > 1:539190/1‑150 (MQ=255) tAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTGAGATCAGACTCATTCCCGGa < 1:983468/150‑1 (MQ=255) aaTAGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAGCACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTGAGATCAGACTCATTCCCGGaa < 1:212355/150‑1 (MQ=255) aGAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTGAGATCAGACTCATTCCCGGAACTg > 1:673346/1‑150 (MQ=255) gAACTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTGAGATCAGACTCATTCCCGGAACTGAc > 6:1388947/1‑151 (MQ=255) aaCTCAATTTCTCTCCCAGGTCACCAACAACGATATGTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTGAGATCAGACTCATTCCCGGAACTGACt < 5:1480145/151‑1 (MQ=255) aaCTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTGAGATCAGACTCATTCCCCGAACTGACt > 3:693948/1‑151 (MQ=255) aCTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTGAGATCAGACTCATTCCCGGAACTGACtt < 6:1488262/151‑1 (MQ=255) aCTCAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTGAGATCAGACTCATTCCCGGAACTGACtt > 5:1052169/1‑151 (MQ=255) cAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTGAGATCAGACTCATTCCCGGAACTGACTTc > 1:1014627/1‑149 (MQ=255) cAATTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTGAGATCAGACTCATTCCCGGAACTGACTTc < 2:1650367/149‑1 (MQ=255) aaTTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTGAGATCAGACTCATTCCCGGAACTGACTTCAgg < 5:724729/151‑1 (MQ=255) aTTCCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTGAGATCAGACTCATTCCCGGAACTGACTTCAGGc < 3:1405021/151‑1 (MQ=255) | TAAAACTATCAAATCAATGAGTAACCGATACAGCCTCACAAATTCTTTCAGATAATTAACCCGTCACTGCGGCACGTTCTCTCATAAGGCGTGCCTGCAGTGTAATCCAGTATGTATCCGGCATAGTTGACGGTTTAATAGAACTCAATTTCTCTCCCAGGTCACCAACAACGATATCTTGTATAACACCCCAGGAGATACGACATTATGATGAGATGCGATATGCTCCTCAGCACCAATCAACGCCCGGACTGGGCCAGTCTTGAGATCAGACTCATTCCCGGAACTGACTTCAGGCG > DH1/3557262‑3557560 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |