| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | DH1 | 4,137,737 | G→A | intergenic (‑31/+145) | sugE ← / ← ecnB | quaternary ammonium compound‑resistance protein SugE/entericidin B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 4,137,737 | 0 | G | A | 98.7% | 1701.2 / 4.8 | 443 | intergenic (‑31/+145) | sugE/ecnB | quaternary ammonium compound‑resistance protein SugE/entericidin B |
| Reads supporting (aligned to +/- strand): ref base G (1/5); new base A (241/196); total (242/201) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.62e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01 | |||||||||||
Only 100 of 444 total aligned reads displayed.
ATCATCGCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGTTATTGCTTA > DH1/4137588‑4137884 | catcGCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTg < 7:658386/151‑1 (MQ=255) atcGCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGa < 1:1280803/151‑1 (MQ=255) gCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCAGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGaaaa < 7:1308352/151‑1 (MQ=255) tCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAgg > 1:117046/1‑151 (MQ=255) cacaGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGc < 7:767138/151‑1 (MQ=255) acaGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCg > 6:151847/1‑151 (MQ=255) acTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGgtcg > 7:1030247/1‑151 (MQ=255) cTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGgtcgt > 2:53674/1‑151 (MQ=255) cGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGgtcgt < 4:1129620/149‑1 (MQ=255) gCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTg > 1:36216/1‑151 (MQ=255) cAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCaa > 2:1487437/1‑150 (MQ=255) cAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGCCGTTTGCAGGGCGTCCTGCaa > 6:104208/1‑150 (MQ=255) aaaCGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCaa > 5:925621/1‑149 (MQ=255) aaCGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGc > 8:651173/1‑151 (MQ=255) aCGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCt < 4:864677/151‑1 (MQ=255) cGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGcat > 8:1542053/1‑149 (MQ=255) cGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTg < 1:155076/151‑1 (MQ=255) gACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTg > 5:1277668/1‑150 (MQ=255) aCTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGAt < 5:1552690/151‑1 (MQ=255) aCTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGAt > 7:880249/1‑151 (MQ=255) aCTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGAt > 4:439588/1‑151 (MQ=255) aCTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCACGTCGTCCTGCAAAGCTGAt > 1:244838/1‑151 (MQ=255) cTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATg > 3:1433697/1‑151 (MQ=255) aGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTg > 2:1376590/1‑151 (MQ=255) ccGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGa > 8:320304/1‑150 (MQ=255) cGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAAc < 4:669418/151‑1 (MQ=255) cGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAAc < 7:1105446/151‑1 (MQ=255) ggTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGat > 6:1363964/1‑151 (MQ=255) ggTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGGCCTGCAAACCTGATGGTTGAACGCat > 1:949028/1‑151 (MQ=255) gTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGat > 2:307987/1‑150 (MQ=255) atTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATAttt < 4:1248123/150‑1 (MQ=255) ttCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTg < 2:61737/150‑1 (MQ=255) ttCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTg < 6:925267/150‑1 (MQ=255) ttCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTg < 3:899077/150‑1 (MQ=255) ttCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGc > 2:667183/1‑151 (MQ=255) ttCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGc > 8:1324584/1‑151 (MQ=255) cAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGcc > 2:913967/1‑150 (MQ=255) cAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCa < 3:184069/151‑1 (MQ=255) cAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGCACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAACAGGCGTTTGCAGGTCGTCCTGCACAGCTGATGGTTGAAGGGATATTTTGcc > 4:1460232/1‑150 (MQ=255) aGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGcc > 1:680587/1‑149 (MQ=255) ccAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTg < 1:581767/151‑1 (MQ=255) cAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTgg < 1:492566/151‑1 (MQ=255) aCGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTAGCCAGGTGGCa < 8:1157291/151‑1 (MQ=255) cATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGa > 8:403450/1‑150 (MQ=255) cATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGa > 3:1347424/1‑150 (MQ=255) cATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGa > 4:1029570/1‑150 (MQ=255) aTACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAAt > 8:771762/1‑151 (MQ=255) cACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCa < 6:599482/151‑1 (MQ=255) tCCAGAAGACCAGCACTAACTAAGATAATCGAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCGAAAGTGAAAAGAGGCGTTTGCATGGCGTCCTGAAAAGCTGATGGTTGAACTGATATTTTGCCAGTTGTCAGGGGAATTTCAACt < 5:214606/150‑1 (MQ=255) ccAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTAt > 8:19728/1‑151 (MQ=255) cagcagACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTAtt > 5:690436/1‑151 (MQ=255) cagcagACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTAtt > 3:29359/1‑151 (MQ=255) agcagACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTa < 6:168179/151‑1 (MQ=255) agcagACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTa < 3:1102723/151‑1 (MQ=255) gcagACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTAc < 5:869316/151‑1 (MQ=255) gcagACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTAc < 7:1348371/151‑1 (MQ=255) cagACCAGCAATAACTAAGATAATCAAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAAAGGATATTTTGACAGGTGGCAGGGGAATTTCAACTATTAcc > 3:1376666/1‑151 (MQ=255) gACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCtt < 5:936241/151‑1 (MQ=255) aCCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCttt < 6:393375/151‑1 (MQ=255) aCCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCttt > 6:1179348/1‑151 (MQ=255) aCCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCttt < 4:958063/151‑1 (MQ=255) ccAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCtttt > 8:560068/1‑150 (MQ=255) ccAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTtg < 2:1340188/151‑1 (MQ=255) ccAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTtg < 3:1524596/151‑1 (MQ=255) cAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTtgt > 5:1036818/1‑151 (MQ=255) aaTAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACt < 5:416736/151‑1 (MQ=255) aTAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGT‑CCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGGTGCTGGTTGCACGGATATTTTTCCAGGTGGGAGGGGAATTTAAACTATTACCTTTTTGCCTAt > 3:634027/1‑151 (MQ=255) tAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTAt > 7:262518/1‑151 (MQ=255) aaCTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATc > 5:354254/1‑151 (MQ=255) cTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGATTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGc > 3:387327/1‑151 (MQ=255) aaGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGc < 2:768286/149‑1 (MQ=255) aaGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGc < 7:159668/149‑1 (MQ=255) aTAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGaa > 5:263002/1‑150 (MQ=255) aTCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGaaaaa > 2:1269228/1‑150 (MQ=255) aTCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGaaaaa > 7:407903/1‑150 (MQ=255) aTCCAGGACATATCAGGCTCCGGAGAATTGCGGCCGTCCCCGCTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGCTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGaaaaaa < 6:772095/151‑1 (MQ=255) tCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAaaac > 5:744290/1‑151 (MQ=255) cAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAaaaca > 1:817403/1‑150 (MQ=255) aGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAaaacaa > 4:614051/1‑150 (MQ=255) aGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAaaacaa > 4:1422104/1‑150 (MQ=255) gACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACg < 5:1510505/151‑1 (MQ=255) atatCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGc > 3:1237563/1‑150 (MQ=255) atatCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGc > 2:112196/1‑150 (MQ=255) atCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACg < 2:996380/151‑1 (MQ=255) atCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACg > 1:1000718/1‑151 (MQ=255) tCAGGCTCCGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACg > 4:274869/1‑150 (MQ=255) cGGAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTg < 4:1540579/151‑1 (MQ=255) ggAGAATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGCCACAGCTGt > 5:578423/1‑151 (MQ=255) gagaATTGGGGCCGTCCCCAGTTAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTc < 3:479349/151‑1 (MQ=255) gagaATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTc < 2:43342/151‑1 (MQ=255) agaATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCg > 8:1012020/1‑151 (MQ=255) gaATTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTAGCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTGGt > 5:1384106/1‑151 (MQ=255) aaTTGGGGCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTa < 2:1229661/151‑1 (MQ=255) ggggCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGt < 7:554707/151‑1 (MQ=255) ggggCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGt > 3:1466488/1‑151 (MQ=255) gCCGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGttat > 4:775478/1‑151 (MQ=255) ccGTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGttatt > 2:194781/1‑151 (MQ=255) gTCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGttattgc < 5:1175570/151‑1 (MQ=255) tCCCCAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGttattgct > 3:799023/1‑151 (MQ=255) ccccAGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGttattgctt > 8:884063/1‑151 (MQ=255) | ATCATCGCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGTTATTGCTTA > DH1/4137588‑4137884 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |