| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | DH1 | = 2668875 | 68 (0.170) | 246 (0.710) | 151/268 | 1.2 | 78.5% | pseudogene (20/345 nt) | pinE | hypothetical protein |
| ? | DH1 | = 2670672 | 74 (0.210) | coding (306/789 nt) | stfP | integrase | |||||
Only 100 of 677 total aligned reads displayed.
GTTCAGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGT > DH1/2668725‑2669025 | aGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCa < 2:1394309/151‑1 (MQ=255) gcgcATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCa > 8:916025/1‑150 (MQ=255) ggtgccagcctggagaaggggcggcacgaccagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCaaaa < 4:777526‑M1/8‑1 (MQ=255) ggtgccagcctggagaaggggcggcacgaccagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAAc < 6:731697‑M1/9‑1 (MQ=255) cGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacct < 1:599688‑M1/151‑14 (MQ=255) gTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttg > 7:1173520‑M1/1‑134 (MQ=255) gTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATgca < 6:119426/150‑1 (MQ=255) aGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagc > 7:1429263/1‑150 (MQ=255) aTCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgt > 6:94248‑M1/1‑130 (MQ=255) tCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtc > 7:354864‑M1/1‑129 (MQ=255) cTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcc > 1:232497‑M1/1‑128 (MQ=255) ggggcggcacgaccagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCt < 6:108479‑M1/26‑1 (MQ=255) gtTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTa < 5:345586/150‑1 (MQ=255) tCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttc > 4:1341498‑M1/1‑122 (MQ=255) cggcacgaccagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTGAATGCAGCAACGGCTACAt > 3:38720‑M1/122‑151 (MQ=255) gcacgaccagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTa > 2:1245266‑M1/120‑151 (MQ=255) ggTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgt > 5:1237654‑M1/1‑119 (MQ=255) gTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtg < 7:1509735‑M1/151‑34 (MQ=255) gacgagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGAc > 2:822974‑M1/116‑151 (MQ=255) cATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGAc < 6:509625/151‑1 (MQ=255) aTTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcc < 4:1472895‑M1/151‑37 (MQ=255) ccagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGc < 8:1300861‑M1/38‑1 (MQ=255) ttgttgATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcctt > 6:639451‑M1/1‑113 (MQ=255) cagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCa > 2:1485352‑M1/113‑151 (MQ=255) ttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGttt < 3:165512‑M1/46‑1 (MQ=255) cgcgTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCGATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattagctgttggtgtgccggttccgtggcgttcagccagtc > 8:583014‑M1/1‑104 (MQ=255) cgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa > 6:276655‑M1/102‑151 (MQ=255) aCATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgcc > 1:300395‑M1/1‑99 (MQ=255) aTAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaac < 5:266731‑M1/151‑55 (MQ=255) aGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacag < 3:271843‑M1/151‑57 (MQ=255) gcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAcc < 8:1543128‑M1/58‑1 (MQ=255) cAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggct > 8:658449‑M1/1‑92 (MQ=255) cAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggct < 6:1492653‑M1/151‑60 (MQ=255) aaTAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGGAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctg < 7:792478‑M1/151‑61 (MQ=255) gctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTa > 7:709261‑M1/87‑149 (MQ=255) gctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATg < 8:1189251‑M1/65‑1 (MQ=255) gttaagcctcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt > 3:561641‑M1/84‑150 (MQ=255) gttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAtt > 3:1346712‑M1/84‑151 (MQ=255) aTGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaa > 4:681304‑M1/1‑84 (MQ=255) ttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg < 8:712617‑M1/69‑1 (MQ=255) taagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg > 1:807064‑M1/82‑150 (MQ=255) aagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt > 3:472784‑M1/81‑151 (MQ=255) aTCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAAGGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaattgcaatg > 3:1031987‑M1/1‑77 (MQ=255) cccccTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggt > 1:1124258‑M1/1‑75 (MQ=255) ccTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgcc > 2:160479‑M1/1‑72 (MQ=255) gtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCa > 4:1040822‑M1/66‑151 (MQ=255) aaaGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggcggaaatgcaatggtgccgcttttt > 5:18769‑M1/1‑65 (MQ=255) aaaGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGATTCATAGCTATACCGGTTATGATTGGTGGTAATGAGCAATc > 8:445690/1‑149 (MQ=255) aaGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGt < 4:583808/151‑1 (MQ=255) gAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctga < 4:958895‑M1/151‑94 (MQ=255) gAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctg > 6:1351601‑M1/1‑58 (MQ=255) gAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAt > 7:188286/1‑151 (MQ=255) tatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAtt < 3:709973‑M1/95‑1 (MQ=255) caaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTc < 4:1188961‑M1/96‑1 (MQ=255) caaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCa > 4:208246‑M1/54‑150 (MQ=255) caaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCa > 1:1312630‑M1/54‑150 (MQ=255) atgCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaat < 7:925115‑M1/151‑99 (MQ=255) aaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGt < 7:103237‑M1/99‑1 (MQ=255) gCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTg < 5:1525907/150‑1 (MQ=255) tcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTTTGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTggg < 6:1562366‑M1/102‑1 (MQ=255) aTTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccg > 1:1530974‑M1/1‑48 (MQ=255) aTTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccg < 4:866328‑M1/151‑104 (MQ=255) aTTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctcttggtgtcccggttcagtggccttcagcaactccgccaacaggctggctgaaatgcaatcctgccgctttttatgctgaagaatacc > 7:1263663‑M1/1‑48 (MQ=255) ttGTTATTTCTACATTTTCATAAACGTAGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATAAGGACCCACCGGTTTCATAGCTATACCGGTTATGATTGCTGCAATTGAGCAATCAGTAATCATACAGTGGGGGTGGAAt > 2:475175/1‑151 (MQ=255) actgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATg > 3:1272689‑M1/41‑151 (MQ=255) tATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggca < 1:1007622‑M1/150‑113 (MQ=255) tATTTCTTCATTTTCATAAACGTTGGGTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggca < 1:105024‑M1/150‑113 (MQ=255) aTTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaa < 8:1427797‑M1/150‑114 (MQ=255) aTTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccggggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaa < 4:348486‑M1/151‑115 (MQ=255) gcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGTCGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCTTTCAGTGGGGGTGGAATGCCGc < 8:1079864‑M1/115‑1 (MQ=255) gcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCa > 5:605534‑M1/36‑151 (MQ=255) ttcATTTTCATAAACGTTGGTTTCGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGTTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaaa > 4:1528846/1‑149 (MQ=255) tcATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggc < 3:1421800‑M1/148‑118 (MQ=255) tcATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGc > 7:645654/1‑151 (MQ=255) cggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATGGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGc < 8:2701‑M1/121‑1 (MQ=255) cATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggctta < 1:1244691‑M1/150‑121 (MQ=255) ttttCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatcc > 1:416198‑M1/1‑28 (MQ=255) tttCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccatcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccg > 1:142894‑M1/1‑27 (MQ=255) tctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATc < 2:59823‑M1/124‑1 (MQ=255) ttCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccg > 2:707738‑M1/1‑26 (MQ=255) ttCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccg < 5:1122413‑M1/150‑125 (MQ=255) cATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGCCGAACCGGTTACATACCAATCCCGGTTATGATTGTTGGTTTTGAGAAAACATAATTAATTAAGTGGGGGTGG‑ATGGCGCaaaaagaagatcc > 2:1088391/1‑141 (MQ=255) aaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCctct > 5:843374‑M1/21‑151 (MQ=255) aaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCctct < 7:46873‑M1/131‑1 (MQ=255) aaaCGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaa < 6:1260212‑M1/150‑130 (MQ=255) gTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgcggaagaatacccggaactggcaaaggcttatccgacaaataaat > 6:823515‑M1/1‑17 (MQ=255) tggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgggggg < 6:401338‑M1/137‑1 (MQ=255) tggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgggg > 7:1332348‑M1/15‑149 (MQ=255) tggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGATATCAATGGCGGTATTGAGCAATCAGTAATCATTCAGTGGCGCTGGAATCCCGCAAAAGCATCTGcctctgcaggg < 8:1376675‑M1/137‑6 (MQ=255) tGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattg > 5:748028‑M1/1‑15 (MQ=255) ggTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgc < 2:120131‑M1/151‑138 (MQ=255) ttGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctg > 2:1351845‑M1/1‑11 (MQ=255) tgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCAGCTGCCTCTGGGGGGGATgg < 4:400289‑M1/142‑1 (MQ=255) gggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATgg > 5:1446415‑M1/9‑150 (MQ=255) ggAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatt < 6:1043899‑M1/151‑144 (MQ=255) gagaAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgactgattt > 5:444806‑M1/1‑7 (MQ=255) agaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGACTCTGGGGGGGATGGAAAt < 2:338005‑M1/146‑1 (MQ=255) gaAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttac > 7:545380‑M1/1‑5 (MQ=255) gaAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttac > 1:903331‑M1/1‑5 (MQ=255) gctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtgg > 3:845745‑M1/1‑1 (MQ=255) | GTTCAGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGT > DH1/2668725‑2669025 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |