| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | DH1 | 4,137,730 | C→A | intergenic (‑24/+152) | sugE ← / ← ecnB | quaternary ammonium compound‑resistance protein SugE/entericidin B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 4,137,730 | 0 | C | A | 97.9% | 2260.3 / 26.5 | 607 | intergenic (‑24/+152) | sugE/ecnB | quaternary ammonium compound‑resistance protein SugE/entericidin B |
| Reads supporting (aligned to +/- strand): ref base C (6/7); new base A (309/284); total (316/291) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
Only 100 of 607 total aligned reads displayed.
CTGACAATCATCGCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGTTA > DH1/4137582‑4137877 | tGACAATCATCGCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTc > 5:790354/1‑151 (MQ=255) gACAATCATCGCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTcc > 5:1748014/1‑151 (MQ=255) catcGCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTg < 8:1014306/151‑1 (MQ=255) catcGCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCACGGTg > 8:881675/1‑151 (MQ=255) catcCCCGTCACAGTAATAAGACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGt < 4:728623/150‑1 (MQ=255) gTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAag > 5:866758/1‑149 (MQ=255) tCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAgg > 4:648873/1‑151 (MQ=255) tCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAgg > 1:715888/1‑151 (MQ=255) cacaGTAATAACACTCGGCGTCAAACGAGTATAGCCGTGGTTATATTTCAGGCCAACGGCCCATACGACTTCCAGCAGACCAGCAATAACTAATATAATCCAGGACATATCAGGCTGCGGAGAATTGGGGCAGTCCCCGTTGAAATGAgg < 1:491543/150‑1 (MQ=255) acaGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCg > 8:274611/1‑151 (MQ=255) acaGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCg > 1:1732874/1‑151 (MQ=255) acaGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATACAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCg > 3:597749/1‑151 (MQ=255) caGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGt < 7:336374/151‑1 (MQ=255) aataaCACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTg < 5:148452/150‑1 (MQ=255) aataaCACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGc > 6:455110/1‑151 (MQ=255) ataaCACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCa < 2:1553214/151‑1 (MQ=255) ataaCACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCa < 7:61162/151‑1 (MQ=255) aaCACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAgg > 3:172300/1‑151 (MQ=255) gggCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTcc < 6:1036453/150‑1 (MQ=255) cGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGgtcgtc < 7:809870/150‑1 (MQ=255) cGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTcc > 4:374604/1‑151 (MQ=255) gTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCa < 6:223089/151‑1 (MQ=255) cAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCaaa < 5:1123042/151‑1 (MQ=255) cAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCaa > 7:1138191/1‑150 (MQ=255) aCGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCt < 1:635777/151‑1 (MQ=255) gACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTg > 7:1020214/1‑150 (MQ=255) gACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGa < 1:1243935/151‑1 (MQ=255) gCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGa < 8:1435263/151‑1 (MQ=255) ccGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGaa < 8:52615/151‑1 (MQ=255) ccGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGa > 5:1276799/1‑150 (MQ=255) cGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAAc > 6:1350036/1‑151 (MQ=255) cGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAAc > 2:172726/1‑151 (MQ=255) gTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACg > 2:550876/1‑151 (MQ=255) gTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACg > 3:1223078/1‑151 (MQ=255) gggTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGa < 2:703337/151‑1 (MQ=255) ggTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGat < 1:111867/151‑1 (MQ=255) ggTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGat < 6:615521/151‑1 (MQ=255) ggTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCACGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATTGTTGAACGGat < 2:1233299/151‑1 (MQ=255) gTATATTTCAGGCCAACGGCCCATACCGCTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGata < 3:179162/151‑1 (MQ=255) atatTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATAtt > 4:1659837/1‑151 (MQ=255) tttCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTg > 8:638818/1‑151 (MQ=255) cAGGTCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGcc > 8:759599/1‑150 (MQ=255) cAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCa < 4:763230/151‑1 (MQ=255) cAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCa < 4:303640/151‑1 (MQ=255) cAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGCAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGcc > 3:476493/1‑150 (MQ=255) aGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAg < 6:34689/151‑1 (MQ=255) ggCCAACGGCCCATACCACTTCCAGCAGACCATCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAgg < 7:1549299/151‑1 (MQ=255) aCGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGc > 6:869417/1‑150 (MQ=255) cGGCCCATTCCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGc > 2:885160/1‑149 (MQ=255) cGGCCCATACCACTTCCAGCAGACGAGCAATAACTAAGATAATCCAGGACATATGAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAg < 1:1565388/151‑1 (MQ=255) ggCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAgg > 4:1776872/1‑151 (MQ=255) ggCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAgg > 3:1088006/1‑151 (MQ=255) ggCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCATGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAgg > 7:1327286/1‑151 (MQ=255) cATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGa > 3:864793/1‑150 (MQ=255) tACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAAtt > 3:716550/1‑151 (MQ=255) aaCCACTTCCAGCAGACCAGCAATAACTAAGATACTCCAGGACATATCGGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAAtt < 7:780088/150‑1 (MQ=255) ccACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTc > 2:1633129/1‑151 (MQ=255) cACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGAACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTc > 1:1466528/1‑150 (MQ=255) ttCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACt > 3:803828/1‑151 (MQ=255) tCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACt < 7:468815/150‑1 (MQ=255) gcaggagACGAGCTATAACTAAGATAATCCAGGAGATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGGTGATGGTTGAAGGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTAt < 8:390500/150‑1 (MQ=255) agcagACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTa < 8:1775273/151‑1 (MQ=255) ccAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTtg > 4:1016982/1‑151 (MQ=255) ccAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTtg < 3:1319617/151‑1 (MQ=255) aGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTtgtg > 1:1036411/1‑151 (MQ=255) aGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTtgtg > 3:209072/1‑151 (MQ=255) cAATATCTAAGATAATCCAGGACATATCTGGCTCCGGAGAATTGGGTGAGTCCGCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGGCAGGTGGGAGGGGAATTTCAACTATTACCTTTGTGAc < 8:1675741/151‑1 (MQ=255) aaTAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGGAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACt < 1:276297/151‑1 (MQ=255) aaTAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACt > 1:1313164/1‑151 (MQ=255) aaTAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACt < 2:136776/151‑1 (MQ=255) aTAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACt > 4:1337782/1‑150 (MQ=255) tAACTAAGATAATCCAGGACATATCAGACTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGCTGGTTGAACGGATATTTTGCCAGGGGGCCGGGGAAGTTCAACTATTACCTTTGTGACTAt > 8:136046/1‑151 (MQ=255) aaCTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTAt < 8:1511972/150‑1 (MQ=255) aaGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGc < 2:610764/149‑1 (MQ=255) aaGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCa < 8:1225557/150‑1 (MQ=255) aGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGc > 6:1156502/1‑148 (MQ=255) aTAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGaa > 2:1130218/1‑150 (MQ=255) tAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGAGATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGaaa > 5:1834435/1‑150 (MQ=255) aaTCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGaaaaa < 1:83581/151‑1 (MQ=255) aTCCAGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTTGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGaaaaaa < 5:486816/151‑1 (MQ=255) aGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAaaacaaa < 7:1635006/151‑1 (MQ=255) aGGACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAaaacaa > 4:1458403/1‑150 (MQ=255) ggACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCTGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAaaagaaac < 7:1279314/151‑1 (MQ=255) gACATATCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACg < 7:1839157/151‑1 (MQ=255) aCATATCAGGCTCCGGAGAATTGGGGCAGTCCCAGGTGAAAAGAGGCGTTTGAAGGTCGTGCTGCAAACATTATGGTTGAAAGGATATTTTGCCATGAGGCAGGGGAATTTCAACTATTAGCATTGTGACTATCGCAGAAAAAACAAACgg > 2:421920/1‑151 (MQ=255) atCATGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCAc < 5:1708635/150‑1 (MQ=255) atCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCAc < 1:408265/150‑1 (MQ=255) atCAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTAACTTTGTGACTATCGCAGAAAAAACAAACGGCACg > 5:349254/1‑151 (MQ=255) cAGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGac > 4:550653/1‑151 (MQ=255) aGGCTCCGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGacc > 6:1643832/1‑150 (MQ=255) cctgagaATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCt < 7:1416690/148‑1 (MQ=255) ccGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCt < 8:1086030/151‑1 (MQ=255) ccGGAGAATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCt > 6:1571396/1‑151 (MQ=255) gaATTGGGGCGGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGACCGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAACCGGCACGACACAGCTGTCGt > 1:966847/1‑151 (MQ=255) gaATTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGt > 2:276059/1‑151 (MQ=255) aTTGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTAc < 4:195137/151‑1 (MQ=255) ttGGGGCAGTCGCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGTGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTAc < 4:1176707/150‑1 (MQ=255) ttGGGGCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTAcc > 7:280980/1‑151 (MQ=255) ggCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGtta < 3:1538358/151‑1 (MQ=255) ggCAGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGtta < 5:650138/151‑1 (MQ=255) | CTGACAATCATCGCCGTCACAGTAATAACACTCGGCGTCAAACGACTAAAGCCGTGGGTATATTTCAGGCCAACGGCCCATACCACTTCCAGCAGACCAGCAATAACTAAGATAATCCAGGACATATCAGGCTCCGGAGAATTGGGGCCGTCCCCGGTGAAAAGAGGCGTTTGCAGGTCGTCCTGCAAAGCTGATGGTTGAACGGATATTTTGCCAGGTGGCAGGGGAATTTCAACTATTACCTTTGTGACTATCGCAGAAAAAACAAACGGCACGACACAGCTGTCGTACCGTTA > DH1/4137582‑4137877 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |