| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | DH1 | 3,913,413 | T→G | intergenic (+79/‑175) | yjjA → / → opgB | hypothetical protein/phosphoglycerol transferase I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 3,913,413 | 0 | T | G | 98.3% | 2084.4 / 7.5 | 541 | intergenic (+79/‑175) | yjjA/opgB | hypothetical protein/phosphoglycerol transferase I |
| Reads supporting (aligned to +/- strand): ref base T (2/7); new base G (230/302); total (232/309) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 541 total aligned reads displayed.
GCTGGCAGAAAAGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTTACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTAAACGTTGGCTA > DH1/3913265‑3913559 | gCTGGCAGAAAAGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGAc > 7:1752442/1‑151 (MQ=255) tGGCAGAAAAGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGAccc > 1:1818135/1‑151 (MQ=255) aGAAAAGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGt < 1:89218/151‑1 (MQ=255) aGAAAAGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGt > 1:137223/1‑151 (MQ=255) aaaaGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGtt > 3:1206780/1‑150 (MQ=255) aaaaGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTa < 1:709080/151‑1 (MQ=255) aaaGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTac > 8:136101/1‑151 (MQ=255) aaGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTac > 4:576635/1‑150 (MQ=255) aaGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCATGGAAGGTTTGACCCCTGTTac > 2:983698/1‑150 (MQ=255) ggTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACg > 2:1758815/1‑151 (MQ=255) gggAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACgg < 7:307798/149‑1 (MQ=255) gTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACgg < 7:604914/151‑1 (MQ=255) aaaaCCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGaa < 3:659493/151‑1 (MQ=255) aaaaCCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGaa < 5:736770/151‑1 (MQ=255) aaaCCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAg < 6:1817922/151‑1 (MQ=255) aaCCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGt < 5:1243818/151‑1 (MQ=255) aaCCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGt < 2:441934/151‑1 (MQ=255) cAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGAc > 3:397495/1‑151 (MQ=255) cAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGAc > 8:510984/1‑151 (MQ=255) aGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTCCCCGGCTGACGCCGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTCTTACACGGGTATTGACCgg > 4:266901/1‑150 (MQ=255) aGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGt > 6:1454778/1‑151 (MQ=255) gCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAAt < 3:1473607/149‑1 (MQ=255) gCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAAt < 8:1636386/149‑1 (MQ=255) cGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCa > 5:343288/1‑150 (MQ=255) aTCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCaaa > 1:1047604/1‑150 (MQ=255) ggTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCaaaaa < 5:13505/148‑1 (MQ=255) ggTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCaaaa < 2:1228647/147‑1 (MQ=255) ggTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAg < 3:1373382/150‑1 (MQ=255) gtgtTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTc < 1:415533/151‑1 (MQ=255) gtTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTg < 2:633997/151‑1 (MQ=255) aaaCAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGttt > 8:887720/1‑150 (MQ=255) aaCAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTtat < 6:908933/151‑1 (MQ=255) aCAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTtata < 3:1764180/151‑1 (MQ=255) aCAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTtata < 1:1589418/151‑1 (MQ=255) aCAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTtata < 4:786543/151‑1 (MQ=255) cAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTtata > 4:1370747/1‑150 (MQ=255) aGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATaa > 7:409630/1‑150 (MQ=255) ggggCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAAc < 2:272377/151‑1 (MQ=255) gggCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACAGGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACt > 5:1120747/1‑151 (MQ=255) gggCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACt < 7:46116/151‑1 (MQ=255) gggCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACt < 7:1256076/151‑1 (MQ=255) gggCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTG‑TTATAAACTa < 5:92936/151‑1 (MQ=255) ggCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCAGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTa < 5:449426/151‑1 (MQ=255) gCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTaa < 1:1679978/151‑1 (MQ=255) gCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTa > 7:1586710/1‑150 (MQ=255) cTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAAt > 8:264591/1‑151 (MQ=255) gAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAAtt < 4:1651302/150‑1 (MQ=255) gAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTc < 5:211512/151‑1 (MQ=255) aCTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCt < 3:264796/151‑1 (MQ=255) aCTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCt > 1:1260009/1‑151 (MQ=255) ttCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGCCGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGGTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTa > 5:1721676/1‑150 (MQ=255) ttCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTa > 1:807586/1‑150 (MQ=255) ttCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTATGTTTATAAACTAATTCCTa > 8:1021755/1‑150 (MQ=255) tCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTTACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTa < 6:1644165/149‑1 (MQ=255) cATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTaac > 1:175671/1‑150 (MQ=255) ttCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTaacaac < 1:315357/150‑1 (MQ=255) ccTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACAt < 8:70120/150‑1 (MQ=255) aaCCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCAt < 7:1368861/151‑1 (MQ=255) aCCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCAtt > 1:1164651/1‑151 (MQ=255) cgcgAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCAtttt < 6:564410/151‑1 (MQ=255) cgccgcGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCGTGCCCGATTCCCTGCTGCTGGACGGTATGACACCTGTTACACGGGAAGTGCCCGTTATCAAAAAAGACTCTTTATAAACTAATTCCTAACAAAATCGCATTTTTTTGac > 6:1119265/1‑150 (MQ=255) cgcgTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACt > 7:1098693/1‑150 (MQ=255) cgcgTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACt > 6:807659/1‑150 (MQ=255) gcgTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAg < 4:1062952/151‑1 (MQ=255) cgTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTGTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGa < 5:1283852/151‑1 (MQ=255) gTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGa > 7:1811814/1‑150 (MQ=255) ttttAGCTGTTACCCGGCTGACGCGGCTCTGTCCTGCCCTTTTCCCTGCTCCTGGACCGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCAGTTTTTTGAGACTAGatt > 2:770025/1‑149 (MQ=255) tttAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGaac < 4:1683705/150‑2 (MQ=255) ttAGCTGTTACCGGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCGTGTTACACGGGTAGTGAGCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAAGTAGATCGCATTTTTTTGACACTAGAAtt < 8:384876/150‑1 (MQ=255) ttAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTg > 5:262037/1‑151 (MQ=255) gTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCaa < 6:1553341/151‑1 (MQ=255) gTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCGCCTGGACGGTGTGACCCCTGTTCCACGGCAAGTGACCCTAATCAAAAAAGTCTGTTTATAAAGTAATTCCTAACAACATAGCATTTTTTTGACACAAGAATTgcagca > 3:1260455/1‑150 (MQ=255) cccGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATg < 1:1319721/151‑1 (MQ=255) gACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACg < 6:467964/150‑1 (MQ=255) ccgcgGCTCTCTCCTGCCCTTTTCACTGCTCCTGGACGGTTTGACGCCTGTTTCACGGGAAGTGACCGTTATCAAAATAGTCTTTTTATATACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGcc < 6:1364143/150‑1 (MQ=255) tctctcCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACAt > 6:1781636/1‑151 (MQ=255) ctcCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACAtt < 3:1589532/149‑1 (MQ=255) tcCTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATtgtg > 8:818767/1‑151 (MQ=255) ccTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATtgt < 3:844146/149‑1 (MQ=255) ccTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATtgt < 3:617283/149‑1 (MQ=255) ccTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGc > 7:1457852/1‑151 (MQ=255) cTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCt > 3:46175/1‑151 (MQ=255) cTGCCCTTTTCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCt > 7:812504/1‑151 (MQ=255) tttCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCa < 2:1438887/149‑1 (MQ=255) tCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCaaaa < 7:1177471/150‑1 (MQ=255) tCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCaaaa < 5:814134/150‑1 (MQ=255) tCCCTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCaaaa > 4:11753/1‑150 (MQ=255) cccTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAg < 8:1208896/151‑1 (MQ=255) ccTGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGc < 6:202472/151‑1 (MQ=255) ntGCTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCt > 4:997015/2‑151 (MQ=255) cTCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTa > 7:236953/1‑150 (MQ=255) tCCTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTaa > 3:1314660/1‑150 (MQ=255) gccTGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTaaa < 8:1122441/150‑1 (MQ=255) ccTTGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTaa < 8:1790582/149‑1 (MQ=255) tGGACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTAAACGt > 2:1542874/1‑151 (MQ=255) ggACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTAAACg < 5:1536001/149‑1 (MQ=255) ggACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTAAACg < 4:1553596/149‑1 (MQ=255) gACGGTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTAAACGTTg > 7:702159/1‑151 (MQ=255) ggTTTGACCCCTGTTACACTGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTAAACGTTGGCt < 3:1026081/151‑1 (MQ=255) ggTTTGACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTAAACGTTGGCt < 2:1018192/151‑1 (MQ=255) | GCTGGCAGAAAAGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCTCTCTCCTGCCCTTTTCCCTGCTCCTGGACGGTTTTACCCCTGTTACACGGGAAGTGACCGTAATCAAAAAAGTCTGTTTATAAACTAATTCCTAACAACATCGCATTTTTTTGACACTAGAATTGCAGCAATATGGCGACGCCATTACATTGTGCTTCTCAAAAAGCTTAAACGTTGGCTA > DH1/3913265‑3913559 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |