Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | DH1 | 3,184,585 | 0 | C | A | 25.4% | 366.5 / 35.5 | 182 | intergenic (+8/‑30) | ECDH1_RS15795/ECDH1_RS15800 | tRNA‑Gln/tRNA‑TERM |
Reads supporting (aligned to +/- strand): ref base C (84/51); new base A (41/5); total (126/56) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.29e-04 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 187 total aligned reads displayed.
CCCGTCGTAGCCACCAAATTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCTGCGTTC > DH1/3184440‑3184734 | ccGTCGTAGCCACCAAATTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCTGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACg < 5:1318601/151‑1 (MQ=255) gtcgtAGCCACCAAATTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAAATTAATAAAGaaccg > 7:1083457/1‑147 (MQ=255) gtAGCCACCAAATTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACTTTATAAAAGCCGccttc > 5:751067/1‑147 (MQ=255) gtAGCCACCAAATTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTAAAGAAGCTTAc > 4:1515556/1‑151 (MQ=255) gtAGCCACCAAATTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAAATTAATAAAgcaccatac > 8:361988/1‑143 (MQ=21) gtAGCCACCAAATTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAAATTAATAAAGCAGCtttc > 1:1339848/1‑149 (MQ=21) gCCACCAAATTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCtt < 2:822571/151‑1 (MQ=255) caAATTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACTTTAATAAAGCGGCGTAccgcgac > 5:57274/1‑144 (MQ=21) aaaTTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTAAAGCAGCTTACCTTGaaatt > 4:603566/1‑149 (MQ=255) aaTTCTGAATGTATGGAATATGTTCGGCAATTTCAAAACCAATTTGTTGGTGTATCCCCAAGCGGTAAGGCACCTGATTCTGATTCCGGGATTCGGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACC‑TGTAAGTGc < 2:683794/151‑1 (MQ=25) aTTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTAAAGACGCTTACCTTGTAAGTGc > 1:296/1‑151 (MQ=255) cGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGt < 2:1188549/151‑1 (MQ=255) ataaTTTGTTCCGCAAATTCAAAACCAATTAGTTGGTGTGTCGCGAAGGGTTTAGTGACGTGATTGTTTTTCATGCATTCCGTGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGt < 5:877943/149‑1 (MQ=255) atatGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGAAGCTTACCTGGTAAGTGAACCAAGTGGGGGTAt > 3:294734/1‑150 (MQ=255) atGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTATAAAAGAACCTTACCGAGAAATTTGACCCAGTTTGGGttcatg > 3:495006/1‑146 (MQ=17) atGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGc < 4:1402567/151‑1 (MQ=255) atGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGc < 3:437845/151‑1 (MQ=255) gTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGcc < 2:1037594/150‑1 (MQ=255) aaTTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAAATTATAAAAGAAGCTTACCTTGTAAGTGAACCCAGTTGGGGTATAGCCAAGCGGTa > 7:1589740/1‑150 (MQ=21) agtCAAAACCAATTTGGTGGGGTATCGACAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTCACGCCGCCTATTTATTCAAGACGCGTCCATTGCAACTGCAACCAGTTGGGGTATCGCCAAGCGGTAAg < 5:169864/149‑1 (MQ=21) accgcccggttattgGGGTATCGCCAAGCGGTAAGGCACCGGATTGTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTgg > 3:1571650/13‑128 (MQ=21) accgcccggttattgGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTgg < 4:1573890/116‑1 (MQ=255) aaaCCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCGTACGTGGTAAGTGCACCCAGTTGGCGTATCGACAAGCGGTAAGGCTcc > 7:49132/1‑151 (MQ=25) cgcccggttattgGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCtt < 1:1106299/93‑1 (MQ=255) cgcccggttattgGGGTATCGCCAAGCGGTAAGGCACCGGATTATGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCtt > 2:1108009/11‑103 (MQ=17) cccggttattgGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGt < 1:1093296/104‑1 (MQ=255) cggttattgGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCtt > 1:57519/7‑104 (MQ=18) actttGTCGGGGTATCGCCACGCGGTAAGGCACCGGATGCTGATTCCGGCAGGCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGAtt < 7:1347430/149‑1 (MQ=37) aTTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTAAAGCACCTTTCCTGGTCAGTGCACCGAGTTGGGGTTTCGGCAAGCGGGAAGGCCCGGGAGTc > 7:1512591/1‑151 (MQ=18) ttcgtgGGGTAGCGCCAAGCGGAACGGCTCCTGTTGTTCAGACGGGCCCTCCGAGGATCTAAGACTCGTACCACAGCAAATATATTCAAGCCGCTTCCCTTGCAAGTGCAGCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCt < 5:1453944/146‑1 (MQ=16) tattgGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCtt > 2:195296/3‑100 (MQ=14) ggatgGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCAGGTTCGAATCCTCGTACCCCAGCCAATTTATTc > 4:1744227/4‑86 (MQ=11) attgGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATTCCGGCATTCCCAGGTTCGAATCCTCGTACCCCAGCCAATTTATAAAACACGCTTCCCTTg > 3:1131416/2‑100 (MQ=14) attgGGGTATCGCCAAGCGGTAAGGCACCGGTTTATGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTg < 4:1133086/99‑1 (MQ=255) ttgGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATTCCGGCATTCCCTGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACCCTTCCCGTGTAAGTGc > 5:408583/1‑106 (MQ=17) tgGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAAATTAATAAAGAAGCAGATCTTTTGAGTGCACGGATTAGCGCAATCGCCAAGCGCGAAGGCACCGGATTCTAATTc > 7:706799/1‑151 (MQ=14) gTATCGCCAAGCGGTAAGGCACCGGTTTTTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCATTTTATTCAAGAGGGTTAGCTTGTAAGTGCACCCAGTTGGGGTATc > 7:293374/1‑117 (MQ=21) gTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATc < 8:293214/117‑1 (MQ=255) tCGCCAAGCGGTAAGGCACCGGTTTGTGATTCCGGCATTCCCAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAg > 8:1424091/1‑104 (MQ=255) tCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCa < 5:808284/99‑1 (MQ=255) tCGCCAAGCGGTAAGGCACCGGATTATGATTCCGGCATTCCGAGGTTCGAATCCACGTACCCCAGCCAATTTATTCAAAACGATTACCATGTAAGTGCa > 6:808334/1‑99 (MQ=18) cGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGAAGCTTACCTTGTAAGTTCACCCAGTAGGGGTATCTCCAAGCGGTAAGGCAAAGGATTCTAATTcactcattc > 4:894112/1‑143 (MQ=25) aGCGGTAAGGCACCGGTTTTTGATTCCGGCATTCCGTGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTg < 1:709937/91‑1 (MQ=255) aGCGGTAAGGCACCGGTTTCTGATACCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACg < 3:370273/76‑1 (MQ=255) aGCGGTAAGGCACCGGATTGTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCGAGCGGt < 3:1745422/118‑1 (MQ=255) gccggaatgaacatgATTCTGATTCAGGCATTACGAGCGTCGAATCCTCGAACTTCTGACTATATATTCAATTGGCTTAACTTGTAAGTGCACTCTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGt < 5:717328/137‑1 (MQ=12) aatgatcatgATTCTGTCTCAGGCTTTAAGAGGGTCGTATCCTCGTACTTCAGAAATTATATTATATACTCTTAAATTTCAATTGCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGa < 4:1788146/141‑1 (MQ=2) gCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGACAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATcc > 8:1008883/1‑151 (MQ=255) cACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGt > 5:1232676/1‑76 (MQ=11) cACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTAAAGCACCGTACGTGGACAGTGAACCCAGTGTGCGTATCGACAAGCGCTAATGCGACGGTTTCTATTTCCGGCATTCCGAgtatctacac > 7:1793807/1‑140 (MQ=12) aCCGGTTTTTGATTCCGGCATTCCGTGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCtt < 8:1788118/68‑1 (MQ=21) gATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGACAATTTATTCAAGACTCTTACCTTGAAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAGGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTAc < 7:85335/151‑1 (MQ=255) ttCTTATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCa < 6:336861/126‑1 (MQ=255) ttCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCa > 5:337334/1‑126 (MQ=255) tCTGTTTCCGGGATTCCTAGGTTCGAATCCACGTACCCCAGCCATTTTATTATAGACGCTTCCCTTGTAAGTGCACCGAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTAccc < 7:671806/150‑1 (MQ=21) ggggcgtCCGGGAGTCCGAGCGTCGAATCCTCCTACCCCAGCCACTATCTTCAAGACGCTTACCTTTTAACTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTAcccc < 7:1571126/145‑1 (MQ=18) gactCCGGCACTCCGACCGTCGAAGCCTCGCACCCCAGCCAATTTATTAAATACGCTTACATTGTAACAGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGc < 1:1417293/148‑1 (MQ=18) aTTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGAGGGGTACCTTGTGAGTGCACCGTGTTGGGGTATCGCCAAGCGGGAAGGCGCCGGAGTCTACTGCGGGCATTCCGAGGATCGTCGCCTCGTCCCCCCGcc > 5:285312/1‑151 (MQ=21) aTTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTAAAGAGGCGTTCCTGGTAAGTGAACCGAGTGTGGGTTGCTGCAAGCGGTAAGGCGCAGGAGTCTAGTTCATTCATTCATAGTATCGAGACATCGTCCCCCAGcc > 1:780789/1‑151 (MQ=12) ttCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGcc > 7:1032155/1‑150 (MQ=255) cggatttCAGAGGTTCGAATCCTCGTAATTCTGACAATTTATTCAAGTTTCTTAAATTGTAAGTGCAATTAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACAt < 6:1752062/146‑1 (MQ=17) cATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTAAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTACTTCCGGCATTCAGAGGGTCGAATGCTCGTACCCCAGCCACATTa > 1:1738878/1‑150 (MQ=255) ccgccccccggcGAAGCCACGTACCTCTGACAATCTATACAAGCCGCTGCCCTAGTAACCGCACCGAGTTGCGGTCTCTCCTCGCGTCAAGCGACCTGATTCTCATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTaaa < 3:1414664/140‑1 (MQ=9) aTTCCGAGGTTCGAATCCTCGTACCCCAGCCACTTTATTAAAGCGCCGTACCGTGTAAGTGCACCGAGTTGGGGTATCGCCAAGCGGTAAGGCCCCGGAGTCTAGTTACGGCCTTCCGAGTTTCGAGTCCTCCTCCCCCCGCGACTTTaa > 5:615072/1‑150 (MQ=19) ttCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTAAAGACGCTTACCGAGTACGTTATCCCATTTTGGGTATCGACAATCGCTAATGCACCGGATTCTAATTAAGGCATTCAGAGTATCGAAACCTCGTCCCCCAGCCACATTaaa > 8:430985/1‑150 (MQ=255) cgccccccggcGAAGCCCCGTACCCCAGCCACTTTCTTCAAGCCGCGTCCCATGCAAGCGCACGCTGGGGGGGTATCGCCAAGCGGTAAGGCACCGGATGCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTaaaa < 7:1012623/141‑1 (MQ=17) cgccggtCGAATCCTCGTAAGCCAGCCACTTTAGTCAAGCCGCGTCCATTGTAAGTCCAGACTGTTGGTGTATCGCCAAGGGTTAAGTCAGCGGATTCTTATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAg < 7:34690/145‑1 (MQ=12) gAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCGCCGGATTCTACTTCCGGCATTCCGAGTTTCGACTCCTCGTCCCGCGGCCACATTAAAAAAGc > 3:59073/1‑151 (MQ=37) aGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGGACCGAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCt > 7:1647159/1‑151 (MQ=255) aGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCTCCAAGCTCTAAGGCACAGGATACTAATTCAAGCATTCCTAGGTTCGAATCCTCGTACCCCAGCAACATTAAAAAAGCt > 4:1306013/1‑151 (MQ=37) aGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCt > 5:516372/1‑151 (MQ=255) ccgtCGAAGCCACGTACCCCAGCCAATTTATTCAAGCCGCTTACATTGTAACTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCTGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTc < 7:62151/148‑1 (MQ=25) gTTCGAATCCTCGTACCCCAGCCAATTTATTAAAGACGCTTACCTTGTAAGTGAACCAAGTTGGGGTATCTACAAGCGGTAAGGCACAGTATTCTAATAAAGGCATTCCGAGTATCGAATCCTCGTACCCCAGCCAAATTAAAAAAGCt > 8:1071117/1‑149 (MQ=25) gTTAGAATCCTCTTATACCATACAATTTATTCAATACGCTTACATGCTTATTTTACGATCTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCg < 8:706070/151‑1 (MQ=17) ttCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCA‑CCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGATCgat > 8:17839/1‑149 (MQ=255) tCGAATCCTCGTACCCCAGCCAAATTATTAAAGAACCATACCTTGTAAGTGAACCAATTATGCGTATCGACAAGCGCTAAGGCACCGGATTCTAATTACGTCATTCAGAGTATCGAATCCACGTACCCCAGCAACATTAAAAAACCtatc > 4:1500576/1‑147 (MQ=255) cGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCtt > 3:1398835/1‑151 (MQ=255) aaTCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCg > 3:793667/1‑151 (MQ=255) aTCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGTTTCTAATCATCCTACCCCAGCCACATTAAAAAACCTAGCTTCgg > 2:570810/1‑151 (MQ=37) ccTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCg > 2:1568786/1‑151 (MQ=255) gTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCt > 4:1165281/1‑151 (MQ=255) gTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCt > 6:1045328/1‑151 (MQ=255) tACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCtt > 5:1754722/1‑151 (MQ=255) tACCCCAGCCAATTTATTCAAGAAGCATACCTTGTAAGTGCACCCAGATGGCGTATCGCAAAGCGCTAAGCCACCGGATTCTAATTCAGGCATTCCGAGCTTCGAATCCTCGAACCCCAGCCACATTAAAAAAGCTAGCTTCGGCGAGCtt > 6:1449980/1‑151 (MQ=255) aCCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCttt > 8:671238/1‑151 (MQ=255) aCCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCttt > 6:1154712/1‑151 (MQ=255) aCCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCttt > 2:1392397/1‑151 (MQ=255) cccAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCttttt > 2:1546239/1‑151 (MQ=255) ccaaGCCAATTTATTAAAGAAGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATACTAATTCCGGCATTCCGAGGTTCGAATCCTAGTACCCCAGCAACATTAAAAAAGCTCGCTTCTGCGAGCttttt > 2:1483672/4‑151 (MQ=25) ccAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTg > 3:1444489/1‑151 (MQ=255) cAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCAGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGc > 8:519216/1‑151 (MQ=255) aGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCt > 3:1672495/1‑151 (MQ=255) cAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCtttt > 6:921849/1‑151 (MQ=255) aaTTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTc > 7:219499/1‑151 (MQ=255) aTTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCt > 1:1071860/1‑151 (MQ=255) ttATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCTGc > 5:1512391/1‑151 (MQ=255) tATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCTGCg > 8:1274077/1‑151 (MQ=255) aTTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCTGCGt > 7:187088/1‑151 (MQ=255) ttCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCCGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCTGCGtt > 6:612018/1‑151 (MQ=255) cAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCTGCGttc > 1:1222989/1‑150 (MQ=255) | CCCGTCGTAGCCACCAAATTCTGAATGTATCGAATATGTTCGGCAAATTCAAAACCAATTTGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTGATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCAATTTATTCAAGACGCTTACCTTGTAAGTGCACCCAGTTGGGGTATCGCCAAGCGGTAAGGCACCGGATTCTAATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCACATTAAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCTGCGTTC > DH1/3184440‑3184734 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |