Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH12,169,5480GT28.6% 364.9 / 72.3 228P671Q (CCG→CAG) rsxCelectron transporter RsxC
Reads supporting (aligned to +/- strand):  ref base G (38/122);  new base T (18/46);  total (59/169)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 230 total aligned reads displayed.

GCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACG  >  DH1/2169398‑2169694
                                                                                                                                                        |                                                                                                                                                    
gcgGCAACTGCCGCTTTGCGCGGTTCAACATGGTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTGCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCg                                                                                                                                                      <  3:183525/151‑1 (MQ=255)
  gggaaCTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCGAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGt                                                                                                                                                    <  6:450341/148‑1 (MQ=255)
    cAACTGCCGCTGTGCGCTGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTGGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑Tg                                                                                                                                                 <  6:198122/151‑1 (MQ=255)
     aaCTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGc                                                                                                                                                <  5:1632707/151‑1 (MQ=255)
      aCTGCCGCTGTGCGCGGATGAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCt                                                                                                                                               <  1:177006/151‑1 (MQ=255)
          ccgcggtGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTc                                                                                                                                          <  5:1721431/145‑1 (MQ=255)
               ttGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGGTCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCg                                                                                                                                       <  2:266467/149‑1 (MQ=255)
               ttGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCg                                                                                                                                       <  3:846751/149‑1 (MQ=255)
                tGCGCTGATCAACCTGTTCTTCTGGTACCGGATGAGCCTGGTGCTGTTCGAGCTTGCGGGCTTTTGCGCGTGCAATAGCCGCTTCGACTGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGtt                                                                                                                                     <  5:1834925/150‑1 (MQ=37)
                tGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTATGTCGCCAGCGAACGCGTCTTAG‑CGCCAGGCAATCCGCAGATGCGCCTGTTCGGCTGGGTCCGCA‑TTAGAATGT‑TGCT‑GTTCCCGgtt                                                                                                                                    >  1:588731/1‑151 (MQ=2)
                 gcgcGGATGAACCTGTTGTTCTGGGACCGCATTAGCCTGTTGCTGTTCGAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTGCGACTGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCA‑TTAGCCTGT‑TGCT‑GTTCCAGCTTg                                                                                                                                   <  7:138262/151‑1 (MQ=11)
                   gcgGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGGTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTgcg                                                                                                                                 <  7:1790236/151‑1 (MQ=255)
                        tCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGGAATAGCAGCAGACACGTCA‑GCTGAGCGCCCAGCGCCCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑ATACCCGCTTgcgggcgt                                                                                                                            >  1:485344/1‑149 (MQ=17)
                          aaCCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTg                                                                                                                          <  8:1702428/151‑1 (MQ=255)
                           acgtggtcttctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTgg                                                                                                                         <  5:996498/145‑1 (MQ=255)
                           aCCTGTTCTTCTGGTTCCGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTgg                                                                                                                         <  3:1718017/151‑1 (MQ=255)
                            ccTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCCGCTTGCGGGCTTGGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGc                                                                                                                        <  4:973262/151‑1 (MQ=255)
                            ccTGTTCTTCTGGTACCGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGc                                                                                                                        <  3:889757/151‑1 (MQ=255)
                             cTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCGACCTGTTATTCTGGATCCGCA‑GAAGACTGA‑TCTT‑GTGACCGTTTGCGGCCTTTGGCt                                                                                                                       >  1:926421/1‑151 (MQ=14)
                               gTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTTCGTGCTTTTGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCt                                                                                                                       <  2:178514/149‑1 (MQ=255)
                               gTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGAGCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCg                                                                                                                     <  6:516693/151‑1 (MQ=255)
                                 tcttctGGTACCGCTTTAGCCTGTTGCTGTTCGAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCTACTGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCgg                                                                                                                    <  2:635410/150‑1 (MQ=255)
                                 tcttctGGTACCGCATTAGCCTGTTGCTGTTCCCGCTTGCGTGCTTTGGCGCGGGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCgg                                                                                                                    <  2:933619/150‑1 (MQ=255)
                                  cttctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGTCGCGTTCAATATCCGCTTAGACGGAA‑GCTTTGCTCGGATCAACCTGTTCTTCTGTATAAGAA‑TTAGCCTGT‑TGCT‑GTTCCCGTTTGCGGGGTGTGGCGCgggg                                                                                                                  >  8:1025013/1‑150 (MQ=17)
                                    tctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCG‑GCTTTGCGCGGATAGAACGGTTCATCTCCCTGCTGA‑TCAGCAGGG‑TCGG‑CTGCGAGTGTGCGCGCTTTGGCTCGGGCat                                                                                                                >  7:860112/1‑150 (MQ=9)
                                       ggttcgtgaTTAGCCTGTTGCTGTTCGAGCTTGCGGGCGTTTGCGCGTGCAATAGCCGCTTCTACTGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAg                                                                                                             <  8:751050/143‑1 (MQ=21)
                                         gagcGCATGAGCCTGGTGCTGGTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTGCCACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCg                                                                                                           <  3:757004/148‑1 (MQ=25)
                                           ccGCATTAGCCTGCTGCTGTTCCAGCTTGCGGGCGTTAGCGCGGGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGc                                                                                                         <  1:1045364/151‑1 (MQ=255)
                                            gtctatAGCCTGCTGCTGGTCGTGTTTTTTTGCTTTAGCGCGTGCAATAGCCGCTGCTACTGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCt                                                                                                        <  8:1095877/146‑1 (MQ=17)
                                            cGCATGAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCt                                                                                                        <  5:956140/151‑1 (MQ=255)
                                             gttattaccTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTGCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCtt                                                                                                       <  4:154915/144‑1 (MQ=255)
                                                  aGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCAGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcg                                                                                                  >  8:723347/1‑151 (MQ=255)
                                                  aGCCTGGTGCTGTTCCAGCTTGCGGGCTTTGGCGCGTGCAATAGCCGCTGCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAc                                                                                                   <  3:460834/150‑1 (MQ=255)
                                                       ggtGCTGTTCCAGCTTGCGTGCGTTGGCGCGGGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACggcggc                                                                                             <  4:1695093/149‑1 (MQ=255)
                                                       gTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACTGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACggcggc                                                                                             <  6:1817932/151‑1 (MQ=255)
                                                         tGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCC‑GCTTTGCGCGGATCGACCTGTTCTTCT‑GCAGCGCAGTTAGCCCGTGTGAC‑G‑TCCAGTGTCACCGCAGACGCTCGGGCAATAGCGGCTTCGACGGCGTCtt                                                                                           >  5:1253246/1‑151 (MQ=2)
                                                          gCTGTTCGAGCTTGCTTGCGTTGGCGCGGGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                          <  1:1602331/151‑1 (MQ=255)
                                                          gCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGAGCGCTTTGGCACGGGCAATAGCGGCTTCGACggcggcggt                                                                                          >  7:393598/1‑148 (MQ=255)
                                                          gCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTCCGCGGATCAACATGTTGTTCTGGGTCCTGA‑TTATCCTGT‑TGGT‑GTTCCTGTTTGCGCCGTTTTGGGCGTTAAATAGCTGCTTCTAcggcactttt                                                                                          >  7:332884/1‑145 (MQ=9)
                                                           cTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGAA‑CGTTTGAGCGGATCGACCTGTTCTTCTGTGTCAGCA‑TTAGACTGT‑TGCT‑GTTCCCGATTCCGAGCTTTTTAACGGGCAATAGCGGCTTCGAcggaggggggg                                                                                         >  8:829378/1‑146 (MQ=2)
                                                            tGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAAGGAGTTCTTCTGGATCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCtgggg                                                                                        >  7:1004836/1‑147 (MQ=255)
                                                             gggcgtcgttGAGTGCGTTTGCGCGGGCAATAGCCGCGGCTACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgc                                                                                        <  4:1532853/142‑1 (MQ=17)
                                                                  aGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCGACCTGTTCTTGTGGCTACGAT‑GTAACCTCT‑TACG‑GTTAGTGTTTGCGGGGTTTGGGGCGGGGAGTAGCGGGTTCGACGGCGGCTTTGCGCGGAt                                                                                  >  5:380060/1‑151 (MQ=9)
                                                                  aGCTTGAGTGCGTTGGCGCGTGCAATAGCCGCGGCGACTGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCTGCTTTGCGCGGAt                                                                                  <  4:198970/151‑1 (MQ=17)
                                                                   gCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCTGT‑TGCT‑GTTCCAGATTGCGCGCTTAGACACGAGCAATATCGTCTTCGCCTACGGAGTTGAGCGGAt                                                                                  >  4:1214655/1‑150 (MQ=11)
                                                                   ccTTGCGTGCTGGGGCGCGGGCAATAGCCGCGGCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTGCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATc                                                                                 <  5:525974/150‑1 (MQ=17)
                                                                    gtttcttGCTTTTGCGCGGGCAATAGCCGCTTCTACTGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCg                                                                                <  6:1633852/145‑1 (MQ=17)
                                                                       gcgtgcgtTGGCGCGTGCAATAGCCGCGTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TGAGCCGGT‑TGCT‑GTGCCCGGTTGCTCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGAcc                                                                             <  1:1204670/151‑1 (MQ=17)
                                                                          tGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGAGCGCATAAAACAGTACTTCTGGCTAAGCA‑TTAGAAGAT‑TGCT‑GTTCCAGTTTGCGCGCTTAGGCTCGGTAAATAGCGGCTTCGACGGCGGCTTTGCGCggggcggagggg                                                                          >  8:573462/1‑141 (MQ=17)
                                                                          ggcgtgggCGCGGGCAATAGCCGCGTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCTGT‑TGCT‑GTTCCCGGTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgt                                                                          <  1:696629/145‑1 (MQ=14)
                                                                            cTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTATTCTGGCTCCGCA‑TTAGCCTGT‑TGCT‑GTTCCAGTTTGCGAGATTTGGCGCGTGATATAGCTGCTTCGACGGCTGGTTTAAGAGGATCAACAtgttt                                                                        >  8:51330/1‑150 (MQ=11)
                                                                             gtttgcgcGTGCAATAGCCGCTGCCACCGCA‑GCGCTGCGCTGAGCAACCTGTTCTTCTGCCTCCGCA‑TTAGCCTGG‑TGCT‑GGGCCCGTTTGCTCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttgt                                                                       <  6:960629/147‑1 (MQ=14)
                                                                              ttcgcgcGTGCAATAGCCGCTTCTACTGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCTGT‑TGCT‑GTTCCGGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttgt                                                                       <  8:1691374/147‑1 (MQ=255)
                                                                              ggggCGCGTGCAATAGCGTCTTCGACGGCA‑GCTTTGCGCGGATCCACCTGTGCTTCTGGAGCGGCC‑TCAGCGGGT‑CTCG‑GTTACTGCTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTgttgtt                                                                      <  1:380076/149‑1 (MQ=11)
                                                                                gtcgcgGGCAATAGCCGCTGCGACGGCA‑GCTTTGCGCTGATCAACCTCTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCTCGCGTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCt                                                                    <  7:670381/149‑1 (MQ=14)
                                                                                 gcgcGTGCAATAGCCGCGTCGACGGCA‑GCTTTGCGCGGATCAACCTGGTCTTCTGGCTCCGCA‑TTAGCCGGG‑TGCT‑GGTCGCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTg                                                                   <  7:130187/151‑1 (MQ=17)
                                                                                  cgcgTGCAATAGCCGCGTCTACTGCA‑GCTTTGCGCTGATCAACCTGTTCTTCTGGCTCCGCT‑TTAGCCGGT‑TGCT‑GTTCGCGTTTGCGGGCTTTGGCTCGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTgg                                                                  <  2:1745761/151‑1 (MQ=17)
                                                                                   gcgTGCAATAGCCGCGTCTACTGCA‑GCTTTGCGCGGATCAACCTGGTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGc                                                                 <  7:942538/151‑1 (MQ=255)
                                                                                    cgTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGGTTTGCGAGGATCGCCCTGGTGTTCTgggt                                                                >  3:268183/1‑149 (MQ=255)
                                                                                    cgTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCt                                                                <  3:585610/151‑1 (MQ=255)
                                                                                     gggCAATAGCCGCTGCGACTGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTc                                                               <  5:70956/149‑1 (MQ=255)
                                                                                     gTGCAATAGCCGCTGCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTc                                                               <  3:1163643/151‑1 (MQ=255)
                                                                                      ggCAATCGCCGCGGCCACGGCA‑GCTGTGCGCGGAGCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTGCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCg                                                              <  5:1036370/150‑1 (MQ=17)
                                                                                         aaTAGGCGCTGCGACGGCA‑GCTTTGCGCGGATCCACCTGTTCTTCTGGCTCCGCA‑TGAGCCTGG‑TGCT‑GGTCCCGTTTGCGGGCGTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCa                                                           <  3:934606/151‑1 (MQ=14)
                                                                                         aaTAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCCACCTGTTCTTCTGGCTCCGCA‑TTAGCCTGT‑TGCT‑GTTGAGCGTTGCGGCCGAGGGCTGCGGGACAGGCGGGGGCGAGGGGGGGGTTGCGCGGCTCGACCTGTTGTTCTGGCTCGGc                                                            >  7:990655/1‑150 (MQ=255)
                                                                                          cgaGCCGCGGCCACGGCA‑GCTTTGCTATTATCAACCTGTTCTTCTGGATCCTCA‑TTAGCAGTT‑TGCT‑TTTCCCTTTTTCGCTCTTTGTCGCTGTCAATAGCTGCTTCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCAt                                                          <  8:1116001/149‑1 (MQ=9)
                                                                                           tAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGGTTGCGCGCTTTGGCGCGGGCGATAGCGGCTTCGACGGCAGGTTTACGGGGATCGGCCTCGGGTGCTCGCTCggaagt                                                         >  5:1418697/1‑147 (MQ=14)
                                                                                             cccgcgcccaccccA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTTCGGGCTTTGGCGCTGGGAATAGGGGGTGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAg                                                       <  1:613791/138‑1 (MQ=14)
                                                                                               cgcgTCTACTGCA‑GCTTTGCGCTGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCTGT‑TGCT‑GTTCCCGTTTGCGGGCTTTTGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGcc                                                     <  4:1743350/151‑1 (MQ=14)
                                                                                                gCTTCTACTGCT‑GCTTTGCGCTGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCTGT‑TGCT‑GTTCCGGTTTGCGGGCTTTGGCTCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCt                                                    <  2:1340708/151‑1 (MQ=14)
                                                                                                gCTTCTACTGCA‑GCTTTGCGCGGATCTACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCTCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCt                                                    <  4:477896/151‑1 (MQ=255)
                                                                                                gCTTCGACGGCA‑GCTTTGCGCGGATCGACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGATTGCGCGCTTTGGCTCGGGCAATAGCGGGATCGACAGAGGAATTGCGCGCACGCCCCTGCTGCGCTGGATCGGCCTTAGccg                                                    >  7:277294/1‑150 (MQ=14)
                                                                                                cgcggctactgctgCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGcc                                                     <  6:1487520/138‑1 (MQ=255)
                                                                                                 cTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCTGT‑TGCT‑GTTCCAGTTTGCGCGCTTTGGCGCGGGCAATAGCTGCTTCGACGGCGGCTTTGCGAGGATCCACAACGTTTTCTGCGTCGGGATTTGCCTg                                                   >  8:55631/1‑151 (MQ=11)
                                                                                                   tccactgCA‑GCTGTTGGCGTAGCAACCTGGTCTTCTGGCTCCGCA‑TTAGCCTGT‑TGCT‑GGTCCGGTTTGCTCGCTTTGGCTCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTg                                                   <  5:294601/143‑1 (MQ=14)
                                                                                                   gcGACGGCC‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGG‑TGCT‑GTTCCCGGTTGCTCGATTTCGCACGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTGtt                                                 <  7:28941/150‑1 (MQ=11)
                                                                                                    cGACTGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCTGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTg                                                <  7:1452479/151‑1 (MQ=255)
                                                                                                     gACGGCA‑GCTTTGCGCGGATCAACCTGGTCTTCTGGCTCCGCA‑TTAGCCTGC‑TGCT‑GTTCCCGTTTGCTGGCTTTCGCTCGGGCAATAGCCGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGc                                               <  5:500118/151‑1 (MQ=14)
                                                                                                      actgCA‑TCTTTGCTCCGATCAACCTGCTCTTCTTCCTCCTAA‑TTACACTGT‑TTCT‑GTTCCCGCTTGCGTGCTTTGTCTCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTg                                                <  6:1389878/146‑1 (MQ=14)
                                                                                                          cccgcggggcgcGGATCTTCCTGTTCTTCTGGCTCCGCA‑TTAGCCGGA‑TGCTCCTGACTGTCTG‑GAGCTCTGCCGGGGGCTATACCGTCCTCGACGGCCGCTTTGCGCGGATCGACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGtt                                           <  3:1290963/143‑1 (MQ=2)
                                                                                                           cctcTTTGCGCTGATCAACCTGTTCTTCTGGTTTCGCA‑TTAGCCGTT‑TGGT‑GTTCGAGCTTGCGGGCTTTGGCGCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTc                                          <  2:561527/148‑1 (MQ=11)
                                                                                                           ccgCTTTGCGCGGAGGAACCTGTTCTTCTGGCTCCGCA‑TTAGCCTGG‑TGCT‑GTGCCCGTTTGCGGGCTTGGGCGCGGGCAATAGCGGCTTCGACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTc                                          <  2:1484433/149‑1 (MQ=14)
                                                                                                             gctttgcgttgtgccaCCTGTTCTTCTGGCTCGGCA‑TTAGCCTGT‑TGCT‑GTTCGGGTTTGTTGGCGTTTGCTCGGGCAATAGCGGCGTCTACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCa                                        <  6:385633/136‑1 (MQ=14)
                                                                                                                 tGCGTGGAGCTACCTGTTCTTCTGGCTCGGCA‑TTAGCCTGG‑TGCT‑GTTCGGGTTTGCGCGCGTTGGCGCGGGCAATAGCCGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCt                                     <  6:877358/150‑1 (MQ=11)
                                                                                                                     gggATCTACCTGTTCTTCTGGCTCGTCA‑TTAGCCTGT‑TGCT‑GTTCGCGTTTGCGGGCTTTGGCGCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTACGt                                <  8:422280/150‑1 (MQ=14)
                                                                                                                     cgGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGGTTTGCGAGGATCCGCCAGGGTTGCTGGGTCGGCAGTATGCTGTAGATGTGCCAGGttccct                                >  1:1705623/1‑147 (MQ=14)
                                                                                                                     cgGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCAGGTTGCGCGCTTTGGCGCGGGCAATAGAGCGTTCGAGAGCGTCTTTGAGCGGATGGAGCTTTTGTTATGGGTAGGGATTAGGGTGTTGCTTTTcaatattg                                   >  2:1230515/1‑141 (MQ=12)
                                                                                                                       tagcAACCTGGACTTCTGGCTCGGCA‑AGACCCTGC‑TGCT‑GGGCCGCTTTGCTCGCGTTCGCGCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGt                                <  5:658079/146‑1 (MQ=11)
                                                                                                                       gATCAAGCTGATCTTCTGGCTCCGCA‑TTAGCCTGT‑TGGT‑GTTCCAGGTTGCTCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGc                              <  7:231619/151‑1 (MQ=14)
                                                                                                                            aCCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCGATAGCTGCTTAGAGCGCGAGATGGCGCGTCTCGACGGCTTTGACTCCGTAGCCTTTAGGCTGTTGCTGTTCCAGCTTGAGAGATTTgg                         >  7:502805/1‑151 (MQ=255)
                                                                                                                                gTTCTTCTGGCTCCGCA‑TTAGCCGGG‑TGCT‑GTGCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCGTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCGCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACg                     <  1:309370/151‑1 (MQ=255)
                                                                                                                                     tctGCCTCCTCA‑TTATCCGTT‑TGCT‑GGTCCAGTTTTTTCGCCTTTGCGCGGGCAATAGCGGCTGCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACggg                   <  8:1212216/148‑1 (MQ=14)
                                                                                                                                            ccGGA‑TGAGCCTGG‑TGCT‑GTGCCAGTTTGCGCGCGTTGGCGCGGGCAATAGCCGCGGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCgg          <  1:832480/150‑1 (MQ=14)
                                                                                                                                            ccGCA‑TTAGCCGGT‑TGCT‑GTTCCCGATTGCGCGCTTTGGCTCGGGCGATAGCAGATGCGAAGCGCGCTATGCTCGCCTCCACGCACTCCGCAGCATCGGCATTAGCCTGTTGCTGTTGCAGCTTTAAAGCTTTGgggcgggcgctggcggg         >  3:1343447/1‑142 (MQ=255)
                                                                                                                                            ccGCA‑TTAGCCGGG‑TGCT‑GGGCCCGTTTGCGCGCGTTGGCTCGGGCAATAGCGGCGTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCg           <  1:1478096/149‑1 (MQ=255)
                                                                                                                                            ccGCA‑TGAGCCTGG‑TGCT‑GGGCCCGTTTGCTGGCGTTCGCGCGGGCAATAGCGGCGGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCgg          <  7:921134/150‑1 (MQ=14)
                                                                                                                                               cA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGAGCACTACCGCCGGCCCAGGAGGCTTTGCGAGGATAGAAATGTTGTTCTGGCTCGGCAGTAGCCTTGAGGTGAACAAGCTTGCGCGCGGTGGCGCGGGcgcgggggcgggg      >  4:549785/1‑139 (MQ=255)
                                                                                                                                                    aGCCTGT‑TGCT‑GGTCGCGTTTGCGCGCTTTCGCTCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcg  <  8:1563390/151‑1 (MQ=255)
                                                                                                                                                    aGCCGGT‑TGCG‑GTTCGTGTGTGGCGGCTGTGGCGCTGTCAATAGCGGCGTCGAGCTCTGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAc   <  7:241453/150‑1 (MQ=11)
                                                                                                                                                     gCCTGT‑TGCT‑GTTCCGGTTTGCGGGCTTTGGCTCGGGCAATAGCGGCTTCCACTGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcg  <  1:472929/150‑1 (MQ=14)
                                                                                                                                                        |                                                                                                                                                    
GCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCA‑GCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCA‑TTAGCCGGT‑TGCT‑GTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACG  >  DH1/2169398‑2169694

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑