New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12994980 (0.000)87 (0.880) 70/268 NT 100% intergenic (+253/‑1684) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
?NC_000913 1300698 = 0 (0.000)intergenic (+1453/‑484) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

ACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATAA  >  NC_000913/1300550‑1300846
                                                                                                                                                    |                                                                                                                                                     
ttctcaaattaccgttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaa                                                                                                                                                       <  2:1141846‑M2/1‑1 (MQ=255)
  ctcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaata                                                                                                                                                     <  1:667211‑M2/3‑1 (MQ=255)
  cccaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaata                                                                                                                                                     <  1:1019629‑M2/3‑1 (MQ=255)
     aaattacagttagttataaggatttccttaactgcttctcctcaccatcctgttatattcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgataaataata                                                                                                                                                  >  2:1178717‑M2/144‑149 (MQ=255)
     aaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaattattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataata                                                                                                                                                  <  1:1246123‑M2/6‑1 (MQ=255)
        ttacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacaccataatcctgggctcgctgaagaataattgaaatgatattattaattccactgcctttggtagatgaaagtgctaaATAATAATc                                                                                                                                               <  2:1373317‑M2/9‑1 (MQ=255)
              ttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGt                                                                                                                                         >  1:982680‑M2/135‑149 (MQ=255)
                agttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataagtgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTa                                                                                                                                       <  1:113280‑M2/17‑1 (MQ=255)
                     taaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAatta                                                                                                                                  >  2:984873‑M2/128‑149 (MQ=255)
                     taaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAatta                                                                                                                                  >  2:933723‑M2/128‑149 (MQ=255)
                      aaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattat                                                                                                                                 >  1:586241‑M2/127‑149 (MQ=255)
                      aaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattat                                                                                                                                 >  1:509635‑M2/127‑149 (MQ=255)
                       aggtttttcttaactgctgctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattatt                                                                                                                                <  1:807192‑M2/24‑1 (MQ=255)
                       aggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattatt                                                                                                                                <  2:913368‑M2/24‑1 (MQ=255)
                        ggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtg                                                                                                                               >  2:1722691‑M2/125‑149 (MQ=255)
                        ggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtg                                                                                                                               >  1:491692‑M2/125‑149 (MQ=255)
                           tttccttaaccgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGc                                                                                                                            <  1:748902‑M2/28‑1 (MQ=255)
                            ttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccgctgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCa                                                                                                                           <  2:657329‑M2/29‑1 (MQ=255)
                            ttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggccaacagaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCa                                                                                                                           <  1:866009‑M2/29‑1 (MQ=255)
                             tcctcaactgcttctcctcaccatcatgttatcttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAt                                                                                                                          <  2:1391512‑M2/30‑1 (MQ=255)
                                 taactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagcataattgaaatgatattattaattccactgcctttggtggaggaaagtgctaaATAATAGTCAATTGTTAAATTATTTTGCATTTCa                                                                                                                      >  1:739779‑M2/116‑149 (MQ=255)
                                  aactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCac                                                                                                                     >  2:923565‑M2/115‑149 (MQ=255)
                                    ctgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattacactgcctttgatagaggaaagtgctaaATAATAATAAATTGTTAAATTATTGTGAATTTCacta                                                                                                                   >  1:550261‑M2/113‑149 (MQ=255)
                                      gcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGAGCATTTCactact                                                                                                                 <  1:1237217‑M2/39‑1 (MQ=255)
                                        ttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTgg                                                                                                               >  2:125775‑M2/109‑149 (MQ=255)
                                          ttcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGaa                                                                                                             <  1:1043164‑M2/43‑1 (MQ=255)
                                              tcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGt                                                                                                         >  2:1586682‑M2/103‑149 (MQ=255)
                                                accatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTaa                                                                                                       >  1:118382‑M2/101‑149 (MQ=255)
                                                accatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttgctacagcctacggcggaATAATAATCAATTGTTAAATTATTGTGCATTTCACTGCTGGAACGGTaa                                                                                                       >  1:420666‑M2/101‑149 (MQ=255)
                                                  catcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATc                                                                                                     <  2:1358024‑M2/51‑1 (MQ=255)
                                                  catcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACGGTAATc                                                                                                     >  2:1696715‑M2/99‑149 (MQ=255)
                                                   atcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCa                                                                                                    >  1:766373‑M2/98‑149 (MQ=255)
                                                       tgttattttcgcaacatcagaatcctgggcttgctgaataataattgaaatgatattattaattccactgccttttgtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaa                                                                                                <  2:1246364‑M2/56‑1 (MQ=255)
                                                        gttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaaa                                                                                               <  1:113316‑M2/57‑1 (MQ=255)
                                                         ttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTTCTGGAACTGTAATCTGAAAAg                                                                                              >  2:1222589‑M2/92‑149 (MQ=255)
                                                         ttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAg                                                                                              <  2:1528859‑M2/58‑1 (MQ=255)
                                                          tattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGa                                                                                             <  2:1085596‑M2/59‑1 (MQ=255)
                                                          tattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGa                                                                                             >  2:175520‑M2/91‑149 (MQ=255)
                                                           attttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGAt                                                                                            <  1:77071‑M2/60‑1 (MQ=255)
                                                              ttccccacatcataatcctgagcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTGAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGa                                                                                         <  2:876715‑M2/63‑1 (MQ=255)
                                                               tcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGAc                                                                                        <  1:261910‑M2/64‑1 (MQ=255)
                                                                cgccacattataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACa                                                                                       <  2:1048730‑M2/65‑1 (MQ=255)
                                                                cgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACa                                                                                       <  1:768135‑M2/65‑1 (MQ=255)
                                                                 gccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGTATTTCACTACTGGAACTGTAATCAGAAAAGATAGACAt                                                                                      <  1:519286‑M2/66‑1 (MQ=255)
                                                                 gccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGCACTGTAATCAGAAAAGATAGACAt                                                                                      <  1:1346506‑M2/66‑1 (MQ=255)
                                                                     catcataatcctgggcttgctgaaggataagagaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCtt                                                                                  >  2:1751210‑M2/80‑149 (MQ=255)
                                                                     catcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaattgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCtt                                                                                  >  2:1144876‑M2/80‑149 (MQ=255)
                                                                     catcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaagaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCtt                                                                                  >  1:1095785‑M2/80‑149 (MQ=255)
                                                                      atcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAATGATAGACATGCTTa                                                                                 >  1:1589910‑M2/79‑149 (MQ=255)
                                                                       tcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAg                                                                                >  1:789878‑M2/78‑149 (MQ=255)
                                                                        cataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGc                                                                               <  1:979810‑M2/73‑1 (MQ=255)
                                                                        cataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGc                                                                               >  1:577029‑M2/77‑149 (MQ=255)
                                                                         ataatcctgggcttgctgaagaataattgaagtgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGcc                                                                              >  1:723140‑M2/76‑149 (MQ=255)
                                                                         ataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTACATTATTGTGCATTTCACTACTGAAACTGGAATCAGAAAAGATCGACATGcttaccg                                                                              >  2:989985‑M2/76‑146 (MQ=255)
                                                                         ataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGcc                                                                              >  2:939553‑M2/76‑149 (MQ=255)
                                                                         ataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGcc                                                                              >  1:524049‑M2/76‑149 (MQ=255)
                                                                          taatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCa                                                                             <  2:1603772‑M2/75‑1 (MQ=255)
                                                                                tgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATctct                                                                       <  2:23680‑M2/81‑1 (MQ=255)
                                                                                tgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATctct                                                                       >  1:925142‑M2/69‑149 (MQ=255)
                                                                                    cttgcggaagaataatttgaaagatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTTTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAttt                                                                   <  2:1744034‑M2/85‑1 (MQ=255)
                                                                                      tgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttga                                                                 >  1:1194790‑M2/63‑149 (MQ=255)
                                                                                       gctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCGAATCTCTAtttgac                                                                >  2:177622‑M2/62‑148 (MQ=255)
                                                                                         tgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgattg                                                              <  1:1479525‑M2/90‑1 (MQ=255)
                                                                                         tgaagaataattgaaatgatattataaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgattg                                                              >  1:905347‑M2/60‑149 (MQ=255)
                                                                                           aagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTATTCAGAAAAGATAGACATGCTTAGCCCATCTCTatgtcattgca                                                            >  2:195127‑M2/58‑147 (MQ=255)
                                                                                              aataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaattg                                                         <  1:1405804‑M2/95‑1 (MQ=255)
                                                                                              aataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGACAATCTCTATTTGattgaattg                                                         >  2:922948‑M2/55‑149 (MQ=255)
                                                                                               ataattgaaatgatattattaatgccactgcctttggtagagtaaagtgctaaATAATAATCAATTGTTAAATTATTGTGAATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaattga                                                        <  1:376970‑M2/96‑1 (MQ=255)
                                                                                                 aattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGaaa                                                      <  2:568487‑M2/98‑1 (MQ=255)
                                                                                                   ttgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGa                                                    >  1:567727‑M2/50‑149 (MQ=255)
                                                                                                        atgatattattaattccactgcctttggtagaggaaagtgctaaATAAGAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgttt                                              <  1:395056‑M2/105‑1 (MQ=255)
                                                                                                           atattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgtttgtt                                           <  2:491692‑M2/108‑1 (MQ=255)
                                                                                                             attattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTaa                                         <  1:1200354‑M2/110‑1 (MQ=255)
                                                                                                              ttattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAg                                        >  2:543629‑M2/39‑149 (MQ=255)
                                                                                                                 ttaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCa                                     <  2:1351305‑M2/114‑1 (MQ=255)
                                                                                                                     ttccactaccattggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGa                                 >  2:1570718‑M2/32‑149 (MQ=255)
                                                                                                                     gtccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGCTAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGa                                 <  2:1337239‑M2/118‑1 (MQ=255)
                                                                                                                         actgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCa                             >  1:1339924‑M2/28‑149 (MQ=255)
                                                                                                                         actgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAACTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTCGATTGAATTAACGATTGTTTGTTAAGGCATGGATGCa                             >  2:1355539‑M2/28‑149 (MQ=255)
                                                                                                                              ctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCta                        >  1:678360‑M2/23‑149 (MQ=255)
                                                                                                                              ctttggtagaggaaagggctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCAAATCTCTAGTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCta                        <  2:301635‑M2/127‑1 (MQ=255)
                                                                                                                                ttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCtata                      <  1:1722691‑M2/129‑1 (MQ=255)
                                                                                                                                  ggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGa                    <  2:1777865‑M2/131‑1 (MQ=255)
                                                                                                                                  ggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGCTAAGGCATGGATGCAAGCTGTAGa                    <  1:1351843‑M2/131‑1 (MQ=255)
                                                                                                                                  ggtagaggaaactcctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCGATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGa                    <  2:1176872‑M2/131‑1 (MQ=255)
                                                                                                                                    tagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAGCTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGAtt                  >  2:1431448‑M2/17‑149 (MQ=255)
                                                                                                                                       aggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCCTGGATGCAAGCGATAGATTCTg               >  1:1260776‑M2/14‑149 (MQ=255)
                                                                                                                                        ggaaagttctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGa              <  2:1533071‑M2/137‑1 (MQ=255)
                                                                                                                                         aaaagtgctcaATAATAATCAATCGTTAAATTATTGTGCATTACACTACTGGAACTGTAATCTACACAGATCGAAAGGCTTAGCCAATCTCTATTTGATTGAATGGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTctgct             >  2:463977‑M2/12‑147 (MQ=255)
                                                                                                                                          aaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCGATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATa            <  2:1321973‑M2/139‑1 (MQ=255)
                                                                                                                                            agtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACg          <  1:1661773‑M2/141‑1 (MQ=255)
                                                                                                                                             gtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACgg         <  1:1119568‑M2/142‑1 (MQ=255)
                                                                                                                                                  aaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAACGATGTTTGTTAAGGCAGGTATGCAAGCTATAGATTCTGATACGGTCAAt    >  1:1229931‑M2/3‑149 (MQ=255)
                                                                                                                                                  aaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAAt    <  1:16936‑M2/147‑1 (MQ=255)
                                                                                                                                                  aaATAATAATCAATTGTTAAATTATTGTGAATTTCAATACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATGTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTAAAt    >  2:629418‑M2/3‑149 (MQ=255)
                                                                                                                                                    ataataatCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGGCAATCTCTATGTGATTGAATTGAAAGATGTTTGTTAAGGAATGGATGCAAGCTTTAGATTCTGATGCTGTTAATat  >  1:609234/1‑148 (MQ=255)
                                                                                                                                                    ataataatCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATaa  <  2:509635/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
ACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATAA  >  NC_000913/1300550‑1300846

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.