| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,356,447 | A→T | 6.4% | intergenic (‑35/+24) | dtpC ← / ← cadA | dipeptide and tripeptide permease/lysine decarboxylase, acid‑inducible |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,356,447 | 0 | A | T | 6.4% | 218.9 / 5.3 | 81 | intergenic (‑35/+24) | dtpC/cadA | dipeptide and tripeptide permease/lysine decarboxylase, acid‑inducible |
| Reads supporting (aligned to +/- strand): ref base A (37/37); new base T (2/3); total (41/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.64e-01 | |||||||||||
CTGATGGGTGAGATAGAGAATGAGTAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGA > NC_000913/4356299‑4356595 | cTGATGGGTGAGATAGAGAATGAGTAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCaa < 1:1037952/149‑1 (MQ=255) gATGGGTGAGATAGAGAATGAGTAAGGCACGGATGCCGTAAAAACTGAAGGGCTCCCAGATTTGGATCGCCACGATAGAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGc < 1:1018691/149‑1 (MQ=255) gtgtGATTGAGAATGAGTGAGGCACGCATGCCGTAAAACCTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGTGCAAAAAAGGGAAGTGGCTTGCCACtt < 2:593044/149‑1 (MQ=255) gTGAGTTAGAGAATGAGTAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCCGTGTGGGCGTGTTCATGTATTCTCCTTATGAGCAATAAAGGGAAGTGGCTAGcgcctt > 2:973034/1‑144 (MQ=255) gTGAGATAGAGAACGAGTACGGCACGCATTCCGTAAAAACTGAAGGACTCCCATATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGGGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCTTGCCACtt < 2:592464/149‑1 (MQ=255) gagaTAGAGAATGAGTAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCTTGCCACTTcc < 1:324560/149‑1 (MQ=255) gagaTAGAGAATGAGTAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTCTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTTGCAAGCCACTTcc < 1:1044522/149‑1 (MQ=255) agaTAGAGAATGAGTAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTTTGAGGGTGTTTTCATGTGTTCTCCTTATTAGCAAAAGCGGGAAGTGGCAGGcccagcccc > 1:574214/1‑142 (MQ=255) ggaggaggAGGAAGGCGCGCGTGCCGGAAAAACTGAAGTACTCGCAGATTGGGAGCGCCACGATATAGTATATCGCGCGCGGCTGTGCGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGt < 2:38316/142‑1 (MQ=255) agagAATGAGTAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCCCGCGGCCTTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGt > 1:1091944/1‑149 (MQ=255) gagaATGAGTCAGGCACGCATGCCACAAAAACTGAAGTACTCTCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTa < 2:1437014/149‑1 (MQ=255) gagaATGAGTAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGAGCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGGGTTTTCATGTGTTCTCCCTATGGGCAAAGAAGGGAAGTGGCAAGCCCCTTCCCTTGtc > 2:787842/1‑148 (MQ=255) gaATGAGTAAGGCACGCATGCCGTAAAAATTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACg < 1:1353795/149‑1 (MQ=255) tGAGTAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGGTTTCCTGTGTTCTCCTTATGAGCAAAAAAGGGACGTGGCAAGCAACCTCCCTTGCACGAGc > 2:72907/1‑149 (MQ=255) gTAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTaa > 2:1082698/1‑149 (MQ=255) tAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAACTGGCAAGCCACTTCCCTTGTACGAGCTAat > 2:155525/1‑149 (MQ=255) aCGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATTATCAAAATAGGTAAGTGGCAAGCCACTTCCCTTGTGCGCGCTActttcctt > 1:797775/1‑144 (MQ=255) ccGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCCGTGAGGGTGAAAACAAGTGTTCTGCGGATGAGCAAAAAAGGGAGGTGGCATTCCACTTCCCTTGGACGAGCTACTTATGTTCTGCtgt > 1:794371/1‑147 (MQ=255) cGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGCGTTTTCATGAGTTCTCCTTATGGGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTGTTGCAttc > 2:1343459/1‑149 (MQ=255) taacatcTGAAGTACTCGCAGATTTGGAGCGCCTCCATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCCTATTACCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTttctt < 1:465989/143‑1 (MQ=255) tAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTttctt < 1:1021224/149‑1 (MQ=255) tAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTttctt > 2:625793/1‑149 (MQ=255) aaaaCTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTtcttct < 1:1258326/149‑1 (MQ=255) aaCTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTGTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGGGCTAATTATTTTTTGCTTTCtttttt > 2:1080479/1‑149 (MQ=255) aaCTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCttt < 1:771029/149‑1 (MQ=255) tGAAGTACACCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGGATTGTCCTTATGAGCAAAACAGGGTAGTGTCAAGCCACTTCCCTTGTAAGAGCTAATTATTTTTTGGTTTCTTCTTTCaa > 1:1064436/1‑149 (MQ=255) gTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATAcc < 1:977466/149‑1 (MQ=255) gTACTCCCAGATTTGGACCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATAcc < 1:123062/149‑1 (MQ=255) tACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGCGTGTTTTCATGTGTGCCCCCCATGAGCAAAAAAGGGAAGAGGCAAGCCACTTCCCTCCTACGCGCTAATTATATTTTGCTGTCTTCTTTccccaccg > 1:1415833/1‑142 (MQ=255) aCTTCCAGAGTTGGATCGCCACGATAGAGTATATCGCGCGCGGCTGTGAGGGTGGTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCGAATTATTTTTTGCTTTCTTCTTTCAATACCtt < 1:442876/149‑1 (MQ=255) tCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGAGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCATTTCCCTGGTATGGGCTACTTATTTTTTGCTTTCTTAGTTCAAtccattta > 1:672606/1‑142 (MQ=255) cccAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAAc > 2:1117913/1‑149 (MQ=255) cccAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGCGTTATCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCGTGTACGAGCTAATTAGTGTTTGCGTGCTTCTTTCAATACCTTAAc > 2:849899/1‑149 (MQ=255) cccAGATTTGGATCGCCACGATATAGTACATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAAc < 2:808530/149‑1 (MQ=255) ccAGATTTCGAGCGCCACGATATGGTATATCGCGGGCGGCTGTGAGGGTGTTTTCATGTGTTCGCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACg < 1:220858/149‑1 (MQ=255) aTTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTCGTACGAGCTAATTATTTTTTGTTTTCTTTTTTAAATTCCTTAACGGtat > 2:996446/1‑149 (MQ=255) ggATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACNAGCTAATTATTTTTTNCAGTCNTCTTTCANTACCTTAACGGTATAGCg > 1:1197765/1‑149 (MQ=255) tCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGcc > 1:718046/1‑149 (MQ=255) tCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGcc > 1:503653/1‑149 (MQ=255) cGATATAGTATATCGCGGGCGGCTGTGAGTGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGCGCTAATTATTTTTTGCTTTGTTGTGCCTGGACCTTAACGGTATAGCGGCCATCAGc < 2:677186/149‑1 (MQ=255) gATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGTTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGcg > 2:791136/1‑148 (MQ=255) atatAGCATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCATTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCt < 1:848424/149‑1 (MQ=255) taGTATATCGCGCTCGGCTGGGAGGTTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTCCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGAc < 2:765409/149‑1 (MQ=255) aGTTTATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACg < 2:1233647/149‑1 (MQ=255) aGTATATCGGGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTACCGGTATAGCGGCCATCAGCTTGACg < 2:1022545/149‑1 (MQ=255) gTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACgg > 1:1412733/1‑149 (MQ=255) tataTCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGt > 2:1400842/1‑149 (MQ=255) atatCGCGGGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAACAGGGAAGTGGATATCCATTTTCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTa < 2:882378/149‑1 (MQ=255) cgGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGGATGCACCGTGa > 2:590066/1‑149 (MQ=255) ggCTGTGATCGTGTTCTCATGTGTTCTCCTTATCAGCAAAAAAGGGCAGTGGCAAGCCCCTTCCCTTGTACGAGCTAATTATTTTTTGCCTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGaa < 1:547492/149‑1 (MQ=255) cTGTGAGGTGGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATGTTTTGCTTTCTTCTTTCAATACCTCAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAata < 2:415042/149‑1 (MQ=255) tgAGGGTGTTTTCATGTGTTCCCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCg > 2:1171374/1‑149 (MQ=255) aGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGt < 2:680340/149‑1 (MQ=255) gggTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGtt > 1:144602/1‑149 (MQ=255) ggTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGttt < 1:615633/149‑1 (MQ=255) ggTGTTTTCATGTGATCTACATATGAGGAAAGAATGTGAGTGGGAGGCCACGTCCCTTGTACGAGCTAATTATTGTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGttt > 2:1439241/1‑149 (MQ=255) gtgtTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTc > 2:770742/1‑149 (MQ=255) tgtTTTCATGTGGTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCa < 1:73458/149‑1 (MQ=255) gtTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCGCCGTGAATATCGGTTTCaa < 1:1056238/149‑1 (MQ=255) ttttCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCaaa > 1:141308/1‑149 (MQ=255) aTGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTTCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCCGCCTGACGGTATGCACCCTGAATATCGGCCTCCAAGCACg > 2:199761/1‑149 (MQ=255) aTGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCg > 1:1236540/1‑149 (MQ=255) aTGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTCTTGCTGTCTTCTTTCAATACCTTAACGGTACAGCGGCCATAAGCCTGACGGTATGCACCGTGAATATCTGTTTCAAAGCCCg < 1:996446/149‑1 (MQ=255) tgtgTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGCGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAACGGCCATCAGCCTGACGAAATACACCGTGAATATCAGTTTCAAAGCCCgg > 1:448043/1‑149 (MQ=255) gtTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGGACGAGCTAATTATTGTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATa < 1:53226/149‑1 (MQ=255) ttCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTACCGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAACACCGGTTTCAAAGCCCGGAAAg > 1:376130/1‑149 (MQ=255) ccTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAg < 2:1091944/149‑1 (MQ=255) ttATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAgcg > 1:1411758/1‑149 (MQ=255) tATGCGCAAAAAAGGGATGTGGCGAGCCCCTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAgcgc < 2:264331/149‑1 (MQ=255) gAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTCTTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGa < 1:315315/149‑1 (MQ=255) aGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGAt > 1:77053/1‑149 (MQ=255) aaggggggAAGCGGAAAGCCACTTCCCTTGGACGGGCTCATGATTTTTGGCTTTCTTCTTGCAATCCCTTAACGGTATAGCGGCCATCAGCCGGCCGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTca < 2:634229/144‑1 (MQ=255) aaaGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTcaca > 2:1079883/1‑149 (MQ=255) aaGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTcacac < 1:162838/149‑1 (MQ=255) aGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTcacaca < 2:718046/149‑1 (MQ=255) aGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTcacaca < 2:503653/149‑1 (MQ=255) ggAAGTGGCTTGCCACTTCCCTTGTACGAGCTAATTATTTTTTTTTTTTTTTTTTCAATACCTTAACGGTATAGCGGCCATCATCCTGACGGTATGCACCGTGAATGTCGTTTTCAAACCGCGGATAGGGTGCGCCGCTTTCGCCCAGc > 2:70566/1‑149 (MQ=255) gAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTCAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGGGAGCGCCGATTTAACacaaca > 1:981259/1‑149 (MQ=255) gTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCACCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTCACACAGCATCt < 1:1117913/149‑1 (MQ=255) ggCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTCACACAGCATCTGc > 1:560632/1‑149 (MQ=255) ggCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAATGAGCGCCGATTTCACACACCATCTGc > 1:331521/1‑149 (MQ=255) cAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTCACACAGCATCTGCAg < 1:1082698/149‑1 (MQ=255) aGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGa > 2:1317715/1‑149 (MQ=255) | CTGATGGGTGAGATAGAGAATGAGTAAGGCACGCATGCCGTAAAAACTGAAGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCGGTTTCAAAGCCCGGATAGTGAGCGCCGATTTCACACAGCATCTGCAGGA > NC_000913/4356299‑4356595 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |