New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2729473 =53 (0.640)4 (0.050) 3/256 NT 7.9% intergenic (‑31/+141) gltW/rrsG tRNA‑Glu/16S ribosomal RNA of rrnG operon
?NC_000913 = 4168362 44 (0.580)intergenic (+163/‑9) rrsB/gltT 16S ribosomal RNA of rrnB operon/tRNA‑Glu

GAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGG  >  NC_000913/2729326‑2729621
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tttgtagtgctcacacagattgtctgatagaaagtgaaaagcaaggcgtttacgcgttgggagtgaggctgaagagaataaggccgttcgctttctattaatgaaagctcaccctacacgaaaatatcacgcaacgcgtgataagcaAt                                                                                                                                                     <  1:244044‑M1/2‑1 (MQ=255)
tttgtagtgctcacacagattgtctgatagaaagtgaaaagcaaggcgtttacgcgttgggagtgaggctgaagagaataaggccgttcgctttctattaatgaaagcgcaccctacacgaaaatatcacgcaacgcgtgataagcaag                                                                                                                                                     <  2:1353656‑M1/2‑2 (MQ=255)
tttgtagtgctcacacaaattttcggatagaaagtgaaaagcaaggcgtttacgcgttgggagtgaggctgaagagaataaggccgttcgctttctattaatgaaagctcaccctacacgaaaatatcacgcaacgcgtgataagcaAt                                                                                                                                                     <  2:896547‑M1/2‑1 (MQ=255)
 ttgtagtgctcacacagattgtctgatagaaagtgaaaagcaaggcgtttacgcgttgggagtgaggctgaagagaataaggccgttcgctttctattaatgaaagctcaccctacacgaaaatatcacgcaacgcgtgataagcaAtt                                                                                                                                                    >  2:402429‑M1/147‑149 (MQ=255)
 agaTATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACACCTGTTACCGCCGTGAAAGGGCGGTGTACTGGGCCTCTAGACGAAGGGGAAGCGAAAATTGCTTATCACGCGTTGCGTGatatg                                                                                                                                                    >  2:1004465/1‑148 (MQ=255)
   gtagtgctcacacagattgtctgatagaaagtgaaaagcaaggcgtttacgcgttgggagtgaggctgaagagaataaggccgttcgctttctattaatgaaagctcaccctacacgaaaatatcacgcaacgcgtgataagcaAtttt                                                                                                                                                  >  1:1209368‑M1/145‑149 (MQ=255)
   atatTGATGTCGTCGACTTTCCCTCACAAACCAGCAAGTGGCCTCCCCTAGGAGATTCGAACCCCTTTTACCGCCGTGAAATGTCGTTGTCCTGGGCCTCTAGACGAAGTGGACACGAAAATTTCTTATCACGCGTTGCGTGATAtttt                                                                                                                                                  <  2:447263/149‑1 (MQ=11)
    tatTGAGGTCGGCGACTTTCACTCATAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTACTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTc                                                                                                                                                 >  1:755532/1‑149 (MQ=17)
    tagggcccacacacattttcagatagaaagtgaaaagcaaggcgttaacgcgttgggagtgaggctgaagagaataaggccgttcgcgttctattaatgaaagcgcaccctacacgaaaatatcacgcaacgcgtgataagcaATTTTc                                                                                                                                                 >  1:380452‑M1/144‑149 (MQ=255)
     agtgctcacacagattgtctgatagaaagtgaaaagcaaggcgtttacgcgttgggagtgaggctgaagcgaataaggctgttcgcttgctattaatgaaaggtcgccgtacacgaaagtagcacgtcacgggtgatcagcaattttgg                                                                                                                                                <  2:160349‑M1/7‑3 (MQ=255)
     agtgctcacacagattgtctgatagaaagtgaaaagcaaggcgtttacgcgttgggagtgaggctgaagagaataaggccgttcgctttctattaatgaaagctcaccctacacgaaaatatcacgcaacgcgtgataagcaATTTTCg                                                                                                                                                >  2:1225515‑M1/143‑149 (MQ=255)
     agtgctcacacagattgtctgatagaaagtgaaaagcaaggcgtttacgcgttgggagtgaggctgaagagaataaggccgttcgctttctattaatgaaagctcaccctacacgaaaatatcacgcaacgcgtgataagcaATTTTCg                                                                                                                                                >  1:232005‑M1/143‑149 (MQ=255)
     agtgctcacacagattgtctgatagaaagtaaaaggcaaggcgtttacgcgttgggagtgaggctgaagagaatagggacgttggtttcctcttcgtgagagctcacccaacacgaaaatatcacgcaacgcgtgataagcaCTTTTCg                                                                                                                                                <  2:160369‑M1/7‑1 (MQ=255)
      ttGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCgt                                                                                                                                               <  1:850816/149‑1 (MQ=32)
      gtgctcacacagattgtctgatagaaagtgaaaagcaaggcgtttacgcgttgggagtgaggctgaagagaataaggccgttcgctttctattaatgaaagctcaccctacacgaaaatatcacgcaacgcgtgataagcaATTTTCgt                                                                                                                                               >  2:1295113‑M1/142‑149 (MQ=255)
      gtgctcacacagattgtctgatagaaagtgaaaagcaaggcgtttacgcgtggggagtgaggctgaagagaataaggccgttcgctttctattaatgaaagctcaccctacacgaaaatatcacgcaacgcgtgataagcaATTTTCgt                                                                                                                                               <  1:94820‑M1/8‑1 (MQ=255)
      gtgcccatacagcttggctgatagaaagtgaaaagcaaggcgtttacgcgttgggagtgaggctgaagagaataaggtcgttcgctttctattaattaaagctcaccctacacgaaaatatcacgcaacgcgtgataagcaATTTTCgt                                                                                                                                               >  2:1305191‑M1/142‑149 (MQ=255)
       tGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGGTACCGCCGTGAAAGGGAGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATGGCTTATCACGCGTTACGCGATAGTTTctgt                                                                                                                                              >  2:356767/1‑146 (MQ=11)
                              aaacacgCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACAAGGATACTGCCGAGCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGa                                                                                                                       <  1:285940/143‑1 (MQ=1)
                                 ccggCACGTGGCGGCCCGTAGGGGATTCGAGCCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAATTTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTCCATTAATAGAAAg                                                                                                                    <  2:889437/146‑1 (MQ=1)
                                               ctcccaGGGGAGACGATCCCCTGTGACCCCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTGCATTAATAGAAAGCGAACGGCCTTAtt                                                                                                      <  1:400447/144‑1 (MQ=1)
                                                                                       cGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTAtt                                                              >  2:422077/1‑149 (MQ=32)
                                                                                            tCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACtt                                                         <  2:548035/149‑1 (MQ=32)
                                                                                            tCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACtt                                                         <  2:84077/149‑1 (MQ=32)
                                                                                             ccTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCTCGCGTTGCGGGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCCGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACttt                                                        <  2:535063/149‑1 (MQ=12)
                                                                                              cTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATGTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACtttt                                                       <  1:40465/149‑1 (MQ=18)
                                                                                                gggCCTCTAGACGAAGGGGACACGCAAAAAGATCATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACACCCAACGCGTAACCGCCTTGCTCTTCACTTTtca                                                     >  2:1403142/1‑149 (MQ=11)
                                                                                                 ggCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTtcat                                                    <  1:95084/149‑1 (MQ=35)
                                                                                                  gCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCGTTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTtcatc                                                   >  1:1212924/1‑149 (MQ=25)
                                                                                                  gCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTtcatc                                                   <  2:931141/149‑1 (MQ=37)
                                                                                                     tctAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGGGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTCTtcatccgc                                                >  2:372915/1‑146 (MQ=255)
                                                                                                      ctAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTACTTCAGAc                                               >  2:125240/1‑149 (MQ=21)
                                                                                                         gccGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAAt                                            <  1:1217540/147‑1 (MQ=39)
                                                                                                         gACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAAt                                            <  1:649576/149‑1 (MQ=39)
                                                                                                             aaGGGGACAGGAAAATTGCTTATCACGCGTTGCGTGATATTTGCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCtgt                                        <  1:757644/149‑1 (MQ=255)
                                                                                                             aaGGGGACACGAAAATTGCTTATCCCCCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCtgt                                        <  1:1017485/149‑1 (MQ=255)
                                                                                                             aaGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCtgt                                        <  2:683489/149‑1 (MQ=39)
                                                                                                               ggggACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTGATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCtgtgt                                      <  1:984634/149‑1 (MQ=255)
                                                                                                               ggggACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCtgtgt                                      <  1:595334/149‑1 (MQ=39)
                                                                                                               ggggACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGAATTTTTCTCTTCAGCCGCACTACCACTGCGTGAGCGCCTTGCTATTCACTTTTCTTCAGACAATCtgtgt                                      <  2:1029361/149‑1 (MQ=11)
                                                                                                                gggACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCtgtgtg                                     <  1:889354/149‑1 (MQ=39)
                                                                                                                cctacacgaaaatatcacgcaacgcgtgataagcaATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCtgtgtg                                     <  1:259525‑M1/114‑1 (MQ=255)
                                                                                                                  tacacgaaaatatcacgcaacgcgtgataagcaATTTTCGTGTAGGGTGAGCTTTCATTCATAGAAAGCGAACGTCCTTATTCTCTTCAGCCTCACTCCCGACGAGTAAACGCCTTGCCATTCACTTTTCATACGACAAACTGTGTgaa                                   <  2:879757‑M1/116‑2 (MQ=255)
                                                                                                                  gACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAg                                   >  2:1310827/1‑149 (MQ=37)
                                                                                                                  gACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGGGTGAg                                   >  1:1323465/1‑149 (MQ=38)
                                                                                                                   acacGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTACACGCCTTGCTATTCACTTTTCATCGGACAATCTGTGTGGGc                                  >  2:1294469/1‑149 (MQ=255)
                                                                                                                    cacGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCa                                 <  1:1201734/149‑1 (MQ=39)
                                                                                                                     acGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCAc                                >  1:756228/1‑149 (MQ=38)
                                                                                                                     acGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCAc                                >  2:261918/1‑149 (MQ=38)
                                                                                                                      cGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACt                               <  1:1146880/149‑1 (MQ=38)
                                                                                                                      cGAAAATGGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACt                               <  2:643238/149‑1 (MQ=255)
                                                                                                                       gAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTg                              >  1:1132410/1‑149 (MQ=38)
                                                                                                                       gAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTg                              <  2:775897/149‑1 (MQ=40)
                                                                                                                        aaaaTTGCCTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGc                             <  2:150193/149‑1 (MQ=38)
                                                                                                                         acgaaaatatcacgcaacgcgtgataTTTTCGTGTAGGGTGAGCTTTAATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCATTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCaa                           <  1:123100‑M1/123‑1 (MQ=255)
                                                                                                                          aatatcacgcaacgcgtgataagcaATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTTTTCACTTTCTATCAGACAATCTGTGTGAGCACTACaa                           <  2:918086‑M1/124‑1 (MQ=255)
                                                                                                                           aTTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCaaa                          <  1:1079543/149‑1 (MQ=255)
                                                                                                                           aTTGCTTATCACGCGTTGCCTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCATCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCaaa                          <  2:1170165/149‑1 (MQ=255)
                                                                                                                            ttGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAg                         <  1:1093452/149‑1 (MQ=255)
                                                                                                                              gCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGACCGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTa                       <  2:1184733/149‑1 (MQ=255)
                                                                                                                               cTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACCATCTGTGTGAGCACTGCAAAGTAc                      >  1:485821/1‑149 (MQ=255)
                                                                                                                                ttttCACGCGTTGCTTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACg                     <  1:394535/146‑1 (MQ=255)
                                                                                                                                 tATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCTACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGc                    <  1:1292665/149‑1 (MQ=255)
                                                                                                                                   tCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCGTCAGACAATCTGTGTGAGCACTGCGCAGTCCGctt                  >  1:389395/1‑149 (MQ=255)
                                                                                                                                   tCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGctt                  >  1:163272/1‑149 (MQ=40)
                                                                                                                                     aCGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGcttct                <  2:1299717/149‑1 (MQ=255)
                                                                                                                                      cgcgTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCCCTGCAAAGTCCGcttctt               >  2:794174/1‑149 (MQ=255)
                                                                                                                                        cgTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTta             >  1:103168/1‑149 (MQ=39)
                                                                                                                                         gTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGACTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTCAGCACTGCAAAGTACGCTTCTTtaa            >  1:895680/1‑149 (MQ=255)
                                                                                                                                         gTTGCGGGATAGTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTtaa            <  2:831719/149‑1 (MQ=255)
                                                                                                                                          ttGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTtaag           <  2:1379216/149‑1 (MQ=255)
                                                                                                                                          ttGCGTGATAGTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGTGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTtaag           <  2:755532/149‑1 (MQ=255)
                                                                                                                                                 atatTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCACAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAagga    >  2:656976/1‑149 (MQ=255)
                                                                                                                                                  tatTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGTCTATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAaggag   >  1:1198545/1‑149 (MQ=255)
                                                                                                                                                  tatTTTCGTGTAGGGTGAGCTTTCATTAAGAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAcggag   >  2:1405495/1‑149 (MQ=255)
                                                                                                                                                   ATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAaggagg  >  1:1174537‑M1/1‑149 (MQ=255)
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GAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGG  >  NC_000913/2729326‑2729621

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.