New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1469240	NA (NA)	83 (0.980)	69/296	0.2	97.7%	intergenic (‑91/‑1)	insC1/ydbA	IS2 repressor TnpA/pseudogene, autotransporter homolog; interrupted by IS2 and IS30
	?	NC_000913	= 1652258	2 (0.020)					pseudogene (708/1158 nt)	intQ	pseudogene, Qin prophage; phage integrase family;Phage or Prophage Related

CTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAA  >  NC_000913/1469096‑1469387                                                                                                                                                 |                                                                                                                                                    cTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAAcc                                                                                                                                                 >  1:412274/1‑149 (MQ=11)  gtttCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAAccc                                                                                                                                                >  1:60920/2‑149 (MQ=14)   tttCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGcccc                                                                                                                                               >  1:227479/1‑149 (MQ=14)       cTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGGCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGaa                                                                                                                                           <  2:511907/149‑1 (MQ=25)        tgtgtgGTACGCCGTCTGCGTTTCTCCGGCCCTAAGTCATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAac                                                                                                                                          <  2:400843/149‑1 (MQ=25)          tgtgGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTCTTCGTAGGCTATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAactt                                                                                                                                        >  1:1304422/1‑149 (MQ=11)          tgtgGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTCAAGTGATATTTGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAactt                                                                                                                                        <  1:1172074/149‑1 (MQ=255)           gtgGTACGCCGTCTGCGTTTCTCCGTCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAactta                                                                                                                                       <  1:339662/149‑1 (MQ=38)                  gCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGc                                                                                                                                <  2:1085096/149‑1 (MQ=255)                  gCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGc                                                                                                                                >  1:556371/1‑149 (MQ=255)                  cccGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTCTGc                                                                                                                                <  2:65962/148‑1 (MQ=255)                     gTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGCCTAGTCTAACAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGa                                                                                                                             <  2:460467/149‑1 (MQ=255)                     gTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGa                                                                                                                             <  2:1198990/149‑1 (MQ=255)                     gTCTGCGTTTCTACGGCCCTAAGACATCAATCATCTGTTCTCCAATAACTAGTCTAAAAACTAGTATTAAGACTATAACTTATCTAAGTGATATTGGTTGTCTGGAGAATCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGa                                                                                                                             <  2:460544/149‑1 (MQ=14)                           gTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGACCTTACTTATGCTGAtcgcgg                                                                                                                       >  2:111146/1‑144 (MQ=255)                            tttCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGt                                                                                                                      <  2:1172810/149‑1 (MQ=255)                                tcCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGGGATATTGGTTGTCTGGAGATGCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGa                                                                                                                  >  1:154180/1‑149 (MQ=255)                                 ccGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGaa                                                                                                                 <  2:1157035/149‑1 (MQ=255)                                 ccGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGaa                                                                                                                 <  1:377287/149‑1 (MQ=255)                                 ccGGCCCTAAGACATCAATCATCTGATCTCAAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTATGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACATACTTATGCTGATTCCGGTGCGaa                                                                                                                 >  1:724322/1‑149 (MQ=255)                                 ccGGCCCCAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAATGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGaa                                                                                                                 >  2:154030/1‑149 (MQ=255)                                    gCCCTAAGACATCCATCAGCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAAt                                                                                                              <  2:854904/149‑1 (MQ=255)                                       cTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGt                                                                                                           <  1:869715/149‑1 (MQ=255)                                        tAAGACATCAATCATCTCTTCTCCAATGACTAACCTAAAAACAACAATTAAGACTATCACTTATTTAAGTGAAATTGGTTGGCTGGAGATTCAGGGGGCCAGTCCAAACCCCCGAACGTAACTATGCTTGTTCCGGGGCGAAAAtgggt                                                                                                          >  2:1273121/1‑145 (MQ=14)                                         aaGACATCCATCATCCGTTTTCCAATAAAAAATAAAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTta                                                                                                         <  2:140039/149‑1 (MQ=18)                                         aaGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTta                                                                                                         >  1:382580/1‑149 (MQ=255)                                            tcATCAATCATCTGTTTTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTtaata                                                                                                      <  2:989493/148‑1 (MQ=255)                                              atcaatcaTCTGTTCTCCAATGACTAGTCTAGAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATaaa                                                                                                    >  1:52600/1‑149 (MQ=255)                                              atcaatcaTCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTGATaaa                                                                                                    >  1:30634/1‑149 (MQ=255)                                               tcaatcaTCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCTGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAg                                                                                                   <  1:906314/149‑1 (MQ=255)                                                caatcaTCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAgg                                                                                                  <  2:1227520/149‑1 (MQ=255)                                                 aatcaTCTGTTCTCCAATGACTAGTCTAAAAACAAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGt                                                                                                 >  1:893952/1‑149 (MQ=255)                                                     atcTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACtt                                                                                             <  2:1139380/149‑1 (MQ=255)                                                       cTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTCTCACTTATTAAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCTCAGAACTTACTTATGCTGATTCCGGAGCGAACAGTGTCAATAAAGGTAATTGt                                                                                           >  2:115476/1‑149 (MQ=18)                                                        ttttCTCCAAGGACTAGGCAAAAAACTAGTATTAAGACTATCACTGATTTAAGTTATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTACTAAAGGTACTTGTa                                                                                          <  2:394096/147‑1 (MQ=21)                                                         gTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGGTTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAg                                                                                         >  2:260744/1‑149 (MQ=255)                                                         gTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAg                                                                                         >  1:186019/1‑149 (MQ=255)                                                          ttCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGa                                                                                        <  2:186019/149‑1 (MQ=255)                                                             tcCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATGCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTc                                                                                     >  2:1241728/1‑149 (MQ=255)                                                              ccAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTGATAACGGTCCTTGTGGATTCa                                                                                    >  2:1160214/1‑149 (MQ=255)                                                               cAATGAGTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCaa                                                                                   <  2:828609/149‑1 (MQ=255)                                                               cAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGCTATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACACCACAACTTACTTATGCATAATCCGGTGCGAACAGTGTTAAGAAAGGTACTTGTAGATTGaa                                                                                   >  2:911704/1‑149 (MQ=18)                                                               cAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGt                                                                                                           <  2:1191565/125‑1 (MQ=255)                                                               cAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGt                                                                                                           >  1:1191565/1‑125 (MQ=255)                                                               cAATGACTAGTCTAAAAACGAGTATTAAGACTAGCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGTTTCaa                                                                                   <  2:308344/149‑1 (MQ=255)                                                                      tAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAGGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCa                                                                            >  2:86684/1‑149 (MQ=255)                                                                       aGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCaa                                                                           >  1:739309/1‑149 (MQ=255)                                                                           tAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGTGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCACTTGGTCAACGCa                                                                       >  1:1088355/1‑149 (MQ=255)                                                                           tAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCACAGAACTTACTTATGCTGATTCCGGTGAGAAAATTGTAAATAAAGGTACTCGTAGCTACAATTGGTCAACGCa                                                                       >  2:266276/1‑149 (MQ=25)                                                                                  tAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACCGTTa                                                                >  1:1093742/1‑149 (MQ=255)                                                                                  tAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTa                                                                >  2:804387/1‑149 (MQ=255)                                                                                  tAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACCTGTAGCTTCAATTGGTCAACGCAACAGTTa                                                                >  2:163113/1‑149 (MQ=255)                                                                                          ccaatATCACTTAAATAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTACGGTGCGAAAATGGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGaaaa                                                        >  2:844249/5‑149 (MQ=38)                                                                                           gACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAAc                                                       >  1:1122816/1‑149 (MQ=255)                                                                                           gACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAAc                                                       <  1:144958/149‑1 (MQ=255)                                                                                             cTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGCGGGCCAGTCTAAACCCCAGAACTTACTAATGCTAATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTAAATTAGCCAAAGCAACAGTTATGTGAAAACAt                                                     >  1:662742/1‑149 (MQ=37)                                                                                              tATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGGGAAAACATg                                                    >  1:367445/1‑149 (MQ=255)                                                                                               aTCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATgg                                                   >  1:805894/1‑149 (MQ=255)                                                                                                tCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCACCAGTTATGTGAAAACATggg                                                  >  1:623099/1‑149 (MQ=255)                                                                                                 cACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATgggg                                                 <  1:74091/149‑1 (MQ=255)                                                                                                  aCTTATTTAAGTGACATTGGTTGTCGGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATACAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGt                                                <  1:848976/149‑1 (MQ=255)                                                                                                    ttATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTg                                              >  1:587225/1‑149 (MQ=255)                                                                                                      aTTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCg                                            >  2:722285/1‑149 (MQ=255)                                                                                                         tAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAg                                         <  2:1175276/149‑1 (MQ=255)                                                                                                          caGTGATTTTGGTTGTCTCGAGATTCAGGGGGCCAGTCTAACGCCCAGAACTTACTTATGCGGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATGCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAgg                                        <  2:414734/148‑1 (MQ=37)                                                                                                           aGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGCGGt                                       >  2:446549/1‑149 (MQ=255)                                                                                                            gTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGtt                                      >  1:1035735/1‑149 (MQ=255)                                                                                                             tGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGCTTCAATTGGTCAACGCAACCGTTATGTGAAACCATGGGGTTGCGGCGGttt                                     >  2:1222928/1‑149 (MQ=255)                                                                                                             tGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGttt                                     >  1:808948/1‑149 (MQ=255)                                                                                                                tatTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGCACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGtttttt                                  <  1:1086436/149‑1 (MQ=255)                                                                                                                tatTGGGTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTGAATAAAGGTACTCGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGtttttt                                  <  2:38155/149‑1 (MQ=255)                                                                                                                tatTCGTTGTCGGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGCTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGtttttt                                  <  2:38201/149‑1 (MQ=255)                                                                                                                 atTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTg                                 <  1:982535/149‑1 (MQ=255)                                                                                                                     gTTGTCTGGAGCTTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATg                             >  2:419536/1‑149 (MQ=255)                                                                                                                      ttGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCATTTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATga                            <  2:893952/149‑1 (MQ=255)                                                                                                                      ttGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATga                            <  1:804387/149‑1 (MQ=255)                                                                                                                       tGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACCTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATgag                           <  1:1218256/149‑1 (MQ=255)                                                                                                                        ggttGGAGAGTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATgaga                          <  1:111146/146‑1 (MQ=255)                                                                                                                         tCTGGAGATTCGGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGAc                         <  1:340069/149‑1 (MQ=255)                                                                                                                         tCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGAc                         <  1:339809/149‑1 (MQ=255)                                                                                                                           tGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGCTTTTTGAATGAGACGa                       >  2:419416/1‑149 (MQ=255)                                                                                                                            ggAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGATTTTTGAATGAGACGaa                      >  2:1231281/1‑149 (MQ=255)                                                                                                                            ggAAATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGAGTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGaa                      <  1:119766/149‑1 (MQ=255)                                                                                                                                          ccAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATGTAcaacagcg        >  2:486253/1‑147 (MQ=255)                                                                                                                                          ccAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGAATCAATTGGGCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGGCGAACATTTACAGCagag        >  2:576384/1‑149 (MQ=255)                                                                                                                                              tCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGaaa    >  2:768944/1‑149 (MQ=255)                                                                                                                                                tAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGaaaaa  >  1:1363977/1‑149 (MQ=255)                                                                                                                                                 |                                                                                                                                                    CTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAA  >  NC_000913/1469096‑1469387

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.