New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3583427 =	NA (NA)	10 (0.230)	8/276	NT	14.5%	intergenic (+10/‑55)	yrhA/insA	pseudogene, interrupted by IS1E/IS1 repressor TnpA
	?	NC_000913	3658812 =	59 (1.350)					coding (448/528 nt)	gadE	gad regulon transcriptional activator

TTACTTATGGTAAACACTTGCCCCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCAACTGAAATTGATGGCTGGCATGACGAGGGATGCAGATGCTGATTTCATTACCC  >  NC_000913/3658666‑3658959                                                                                                                                                   |                                                                                                                                                    ttACTTATGGTAAACACTTGCCCCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCCCAATATTTCGCAACAAACATTAAAGATTCAg                                                                                                                                                   >  2:441860/1‑149 (MQ=255) ttACTTATGGTAAACACTTGCCCCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAAGTATGCAACTGAGTCTGAAAAATAAAACAGCAAGTAGTGTAATGGAAACGCTCAATATTTCGCAACAAACATTAAAGATTAAg                                                                                                                                                   >  2:585822/1‑149 (MQ=255)    cTTATGGTAAACACTTGCCCCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGGTTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAGCGAACATGAAAGATTCAGaag                                                                                                                                                >  1:90103/1‑148 (MQ=255)    cTTATGGTAAACACTTGCCCCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAACAATTCAGaaa                                                                                                                                                >  2:394923/1‑149 (MQ=255)    cTTATGGTAAACACTTGCCCCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGaaa                                                                                                                                                <  1:521635/149‑1 (MQ=255)    cTTATGGTAAACACTTGCACCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGaaa                                                                                                                                                <  1:17638/149‑1 (MQ=255)    cTTATGGCAAACACTTGCCCCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGaaa                                                                                                                                                <  1:671392/149‑1 (MQ=255)     ttATGGTAAACACTTGCCCCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAGTTATGCAACTGATTCTGAAAAATAAAAATGAAAACAATATCAAGTCGACGCTCAATATTTAGCAACAAACATTAAAGATTAAGaaag                                                                                                                                               >  2:292994/1‑148 (MQ=255)     ttATGGTAAACACTTGCCCCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGACGGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAAt                                                                                                                                               >  1:767502/1‑149 (MQ=255)     ttATGGTAAACACTTGCCCCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAAt                                                                                                                                               >  1:767357/1‑149 (MQ=255)     gtATGGTAAACACTTGCCCCATAAGACTTTCCAATTATGTTTTTCACATAATCAGTGCAAAATTATGCAACGGACTCTGAAAACTAAAAATCAAAGCAATATCACGACGACGCTCAATATTTCGCAACAAACACTAAAAATTCAGaaaa                                                                                                                                               >  2:614367/2‑148 (MQ=255)      tATGGTAAACACTTTCCCCATAAGAATTTACAATTATGTTTTTCACATAGTCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCCCAATATTTCGCAACAAACATTAAAGATTCAGAAAtt                                                                                                                                              <  2:536425/149‑1 (MQ=255)       gctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatacaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAGAAATTc                                                                                                                                             <  2:773375‑M2/9‑1 (MQ=255)        tGGTAAACACTTGCCCCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATCTTTCGCAACAAACATTAAAGATTCAGAAATTcg                                                                                                                                            <  1:501957/149‑2 (MQ=255)        tGGTAAACACTTGCCCCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTcg                                                                                                                                            <  1:501988/149‑2 (MQ=255)        tGGTAAACACTTGCCCCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCa                                                                                                                                            >  1:688041/1‑149 (MQ=255)         ggTAAACACTTGCCCCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCaa                                                                                                                                           <  1:720432/149‑1 (MQ=255)          gTAAACACTTGCCCCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAACTGAAAGCAATAACACGTCGACGCTCAATATTTCGAACCAAACATTCAAGATTCAGACAttgggt                                                                                                                                          >  2:256709/1‑145 (MQ=255)              acacTTGTCCCATAAGAATTCACAAGTATGTTTGTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCTACAAACATTAAAGATTCAGAAATTCAACATTa                                                                                                                                      <  2:352241/149‑1 (MQ=255)              acacTGCCCCCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTa                                                                                                                                      <  2:194631/149‑1 (MQ=255)               catctGCCACATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTAt                                                                                                                                     <  2:21773/145‑1 (MQ=255)                cggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAGAAATTCAACATTATg                                                                                                                                    <  1:592440‑M2/18‑1 (MQ=255)                  ttGCCCCATAAGAATTCACAATTCTGTTTTTCACATAATCAGTTCAAAATTATGCAACCGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTa                                                                                                                                  <  1:325208/149‑1 (MQ=255)                  ttGCCCCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTa                                                                                                                                  <  1:598132/149‑1 (MQ=255)                  ttGCCCCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTa                                                                                                                                  <  1:598177/149‑1 (MQ=255)                       ccATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGGTTCTGAAAAATAAAAATGAAAGCAATATCACGTCGAGGCTCAATATTTCTCAGCAAACATTAAAGATTCAGAAATTCACCATTATGTACAAGc                                                                                                                             >  1:340835/1‑149 (MQ=255)                       ccATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTCCAAGc                                                                                                                             >  1:497017/1‑149 (MQ=255)                         aTAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACAGATTGTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTAAACATTCTGTACAAGCTg                                                                                                                           >  2:515025/1‑149 (MQ=255)                         aTAAGAATTCACAATTATGTTTTTCACATAATCAGATCAAAATTATGCAACTGCTTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAGCATCAAAGATTAAGCAATTCGACATTATCTACAAGCTg                                                                                                                           >  2:415036/1‑149 (MQ=255)                          tAAGAATTAAAAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGAATCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGa                                                                                                                          <  2:435710/149‑1 (MQ=255)                              aaTTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACt                                                                                                                      <  1:502488/149‑1 (MQ=255)                              aaTTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACt                                                                                                                      <  1:225818/149‑1 (MQ=255)                                 tCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGGTTCAGAAATTCAACATTATGTACAAGCTGAAACTAAg                                                                                                                   >  1:81490/1‑149 (MQ=255)                                   acaATTATGTTTTTCACATAACCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCATTATTTTGCAACAAACATTAAAGATTCAGAAATTCAACATTATTTACAAGCTGAAACTAAGAc                                                                                                                 <  2:14554/149‑1 (MQ=255)                                       accaccccgccacgaggctaacatgatggacagctgatataaacagaagccactggagcacctcaaaaacaccatcagacacgaagtcagtaagttggcagcatcaccCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTAt                                                                                                             <  2:454171‑M2/41‑1 (MQ=255)                                            tttttCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCg                                                                                                        <  1:487858/149‑1 (MQ=255)                                             ttttCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGa                                                                                                       <  1:677570/149‑1 (MQ=255)                                             ttttCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGa                                                                                                       <  1:86043/149‑1 (MQ=255)                                                  agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCg                                                                                                  >  1:617223‑M2/98‑149 (MQ=255)                                                   caTAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGt                                                                                                 <  1:327801/149‑1 (MQ=255)                                                       ctgaacaggagggacaggtgatagaaacagaagccactggagcacctcaaaaacaccataatacactaaatcagtaagttggcagcatcaccCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCAcc                                                                                             >  2:578967‑M2/93‑149 (MQ=255)                                                        tCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCAccc                                                                                            >  1:465844/1‑149 (MQ=255)                                                           acaggacggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTgg                                                                                         <  2:425328‑M2/61‑1 (MQ=255)                                                            ttCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTggg                                                                                        <  2:120340/149‑1 (MQ=255)                                                            ttCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTggg                                                                                        >  1:427169/1‑149 (MQ=255)                                                                   ttATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATcaca                                                                                 <  1:166036/149‑1 (MQ=255)                                                                      tGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGCCGCTCAATACTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATca                                                                              <  2:332406/149‑2 (MQ=255)                                                                          aCTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCAAATCTTGtt                                                                          >  2:716784/1‑149 (MQ=255)                                                                          aCTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCAAATCTTAtt                                                                          >  2:528544/1‑149 (MQ=255)                                                                           cTGATCCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTTAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTAGGTATCACATCTTAttc                                                                         <  2:759938/149‑2 (MQ=255)                                                                                    aaaaataaaaatGAAAGCAATATCACGTCGAAGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTGAGCCTGGGTATCACATCTTATTTTTAGTCAgg                                                                >  2:747888/1‑149 (MQ=255)                                                                                              atGAAAGCAATATCACGTCTACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCGGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCaa                                                      <  2:493869/149‑1 (MQ=255)                                                                                              atGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCaa                                                      >  1:481700/1‑149 (MQ=255)                                                                                              atGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGGATCACATCTTATTTTTAATAAGGACATAAACaa                                                      >  1:662155/1‑149 (MQ=255)                                                                                                     tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTATTCAGGACAAAACCAAATGAAAt                                               >  2:442120‑M2/47‑149 (MQ=255)                                                                                                     tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGCCATAAGCAACTGAAAt                                               >  2:742061‑M2/47‑149 (MQ=255)                                                                                                     tcaaaaacaccatcatacactaaatcagtaagttgacagcatcaccCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCAACTGCAAt                                               >  1:436968‑M2/47‑149 (MQ=255)                                                                                                      aaTATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCAACTGAAAtt                                              <  1:26821/149‑1 (MQ=255)                                                                                                           cACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCAACTGAAATTGTtgg                                         >  1:56261/1‑149 (MQ=255)                                                                                                           cACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCAACTGAAATTGAtgg                                         >  1:487261/1‑149 (MQ=255)                                                                                                              gTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCAACTGAAATTGAtggctg                                      <  1:446719/149‑1 (MQ=255)                                                                                                                  aCGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAGCTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAAGACATAAGCAACTGAAATTGATGGCTGGCAt                                  >  1:526588/1‑149 (MQ=255)                                                                                                                        aaTATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCAACTGAAATTGATGGCTGGCATGACGAg                            <  1:485504/149‑1 (MQ=255)                                                                                                                        aaTATTTCCCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCAACTGAAATTGATGTCTGTCATTACGAg                            <  2:71878/149‑1 (MQ=255)                                                                                                                          tatTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCACCTGAAATTGATGGCTGGCATGACGAggg                          <  2:592392/149‑1 (MQ=255)                                                                                                                            tttCGCAACAAACATTAACGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCAACTGAAATTGATGGCTGGCATGACGAGGGAt                        <  1:400381/149‑1 (MQ=255)                                                                                                                              tCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCAACTGAAATTGATGGCTGGCATGACGAGGGATGc                      >  2:529573/1‑149 (MQ=255)                                                                                                                                  aacaaacaTTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCAACTGAAATTGATGGCTGGCATGATGAGGGATGCAGAt                  <  1:532987/149‑1 (MQ=255)                                                                                                                                        gcagcatcaccCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCAACTGAAATTGATGGCTGGCATGACGAGGGATGCAGATGCTGAt            <  1:751490‑M2/138‑1 (MQ=255)                                                                                                                                          ttAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCAACTGAAATTGATGGCTGGCATGACGAGGGATGCAGATGCTGAttt          <  2:445071/149‑1 (MQ=255)                                                                                                                                            aaaGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCAACTGAAATTGATGGCTGGCATGACGAGGGATGCAGATGCTGATTGCa        >  1:599814/1‑149 (MQ=255)                                                                                                                                             aaGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCAACTGAAATTGATGGCTGGCATGACGAGGGATGCAGATGCTGATTTCAt       <  1:555053/149‑1 (MQ=255)                                                                                                                                              aGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCAACTGAAATTGATGGCTGGCATGACGAGGGATGCAGATGCTGATTTCAtt      >  2:676301/1‑149 (MQ=255)                                                                                                                                                 ccCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATAGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCAACTGAAATTGATGGCTGGCATGACGAGGGATGCAGATGCTGATTTCATTAcc   <  1:578967‑M2/147‑1 (MQ=255)                                                                                                                                                  tCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCAACTGAAATTGATGGCTGGCATGACGAGGGATGCAGATGCTGATTTCATTAccc  >  2:525418/1‑149 (MQ=255)                                                                                                                                                  tCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCAACTGAAATTGATGGCTGGCATGACGAGGGATGCAGATGCTGATTTCATTAccc  <  1:451823/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                    TTACTTATGGTAAACACTTGCCCCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAGTCAGGACATAAGCAACTGAAATTGATGGCTGGCATGACGAGGGATGCAGATGCTGATTTCATTACCC  >  NC_000913/3658666‑3658959

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.