| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,756,564 | Δ1 bp | 7.8% | intergenic (‑54/+111) | aldB ← / ← yiaY | aldehyde dehydrogenase B/L‑threonine dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,756,564 | 0 | C | . | 7.8% | 225.3 / 17.7 | 77 | intergenic (‑54/+111) | aldB/yiaY | aldehyde dehydrogenase B/L‑threonine dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (37/33); new base . (4/2); total (41/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.31e-01 | |||||||||||
GCCAATAAAGTTGTCATAGCGGGCTTTTAACTTGAGGGGGAAACCATACTCGCCGGGCTTAATCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCGCGATAAATCGCCACAATTTCTTCG > NC_000913/3756421‑3756711 | gccAAGAAAGTTGTTATAGCGTGCTTTTAACCTGAGGGGGAAACCATACTCGCCGGGCTTAATCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGc < 2:426817/149‑1 (MQ=255) aaTAAAGTTGTCATAGCGGGCTTTTAACTTGAGGGGGAAACCATACTCGCCGGGCTTAATCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGCGACTGGCGAAGAT‑TTCGCCAg < 1:230450/149‑1 (MQ=255) cgTTGTCATAGCGGGCTTTTAACTTGAGGGGGAAACCATACTCGCCGGGCTTAATCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAAGAT‑TTCGCCAGTcacg < 1:446171/148‑4 (MQ=255) aGTTTTCATAGCGGGCTTTTAACTTGAGGGGGAAACCATACTCGCCGGGCTTAATCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑GATTTCGCCAGTcacg < 1:238357/149‑4 (MQ=255) ttGTCATAGCGGGCTTTTAACTTGAGGGGGAAACCATACTCGCCGGGCTTAATCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTaa > 2:235156/1‑149 (MQ=255) tcacggCGGGCTTTTACCTTGAGGGGGAAACCATACTCCCCGGGCGTAATCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCGCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAg < 1:247088/144‑1 (MQ=255) tCATAGCGGGCTTTTAACTTGAGGGGGAAACCATACTCGCCGGGCTTAGTCTGTGCGGGAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGGGTGAGGTATAACCAGGGTAGCCGTGACTGGCGAG‑ATCTTCGCCAGCCGGTAACAg > 2:43046/1‑149 (MQ=255) tCATAGCGGGCTTTTAACTTGAGGGGGAAACCATACTCGCCGGGCTTAATCTGTGCTGACGGGGGCTTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGGATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCACAAATCGGTAACAg > 1:54688/1‑149 (MQ=255) aTAGCGGGCTTTTAGCTTGAGGGGGAAACCATACTCGCCGGGCTTAATCTGTGCTGAAGGGGGATAATTGGTCATGATCGTCTCCGTGCGGTGTGAGGTATAACAAGGGTAAACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTagaggct > 2:351052/1‑143 (MQ=255) tAGCGGGCTTTTAACTTGAGGGTGAAACCATACTCGCCGGGCTTAATCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTGTACACCGGCTCAACGTGACTGGCGGA‑ATCTTCGCCAGTCGGTAACAGCtt > 2:357843/1‑149 (MQ=255) tAGCGGGCTTTTAACTTGAGGGGGAAACCATCCTCGCCGGGCTTAATCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGCCGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCtt < 1:347125/149‑1 (MQ=255) gCTTCTAACTTGAGGGGGAAACCATACTCGCCGGGCTTAATCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGAc < 2:73512/149‑1 (MQ=255) ttAACTTGAGGGGGCAACCATACTCGCCGGGCTTAAACTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTAGAAAAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCAGGTCGGTAACAGCTTCActaggacc > 2:448839/1‑142 (MQ=255) tttggggggAAACCATACTCGCCGGGCTTGATCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCAc < 2:236680/145‑1 (MQ=255) tttaGGGGGAAACCATACTCGCCGGGCTTAATCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCAc < 2:376516/146‑1 (MQ=255) tGAGGGGGAAACCATACTCGCCGAGCTTAATCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGCTAGTCGTGATGTGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACg > 1:412594/1‑149 (MQ=255) gAGGGGGAAACCATACTCGCCGGGCTTAATCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTCACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGa < 1:538410/149‑1 (MQ=255) aGGGGGAAACCATACTCGCCGGGCTTAATCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGaa < 1:380615/149‑1 (MQ=255) aaCCATACTCGCCGGGCTTAATCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACgg < 1:299428/149‑1 (MQ=255) cTCGCCTGGCTTAATCTGGGCTGGAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAggg < 2:690435/149‑1 (MQ=255) tCGCCGGGCTTAAGCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGt < 2:597786/149‑1 (MQ=255) gCCGGGCTTAATCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGGTa > 1:704849/1‑149 (MQ=255) gCCGGGCTTAATCTGTGCTGAAGGGGGAATATTGGTTATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCCGTCGGTAAAGGCTTTGCGACAGCTATCACGAATTTACGGGCAAGGGTTa > 1:68187/1‑149 (MQ=255) ccGGGCTTAATCTGAGCTGAAGGGGGATTATTGGTCTTGATCATCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTATGGGCAAGGGTTAc < 1:552231/149‑1 (MQ=255) gCTTAATCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACagag < 1:725132/149‑1 (MQ=255) gCTTAATCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACagag < 2:730089/149‑1 (MQ=255) cTTAATCTGTGCTGAAGGGGGATTATTTGGCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAgaga < 1:748010/149‑1 (MQ=255) ttAATCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGAt > 1:381366/1‑149 (MQ=255) tgtgCTGAAGGGGGATTATTGGTCGTGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCATGGGGTACAGAGATAGTTGa > 1:579842/1‑149 (MQ=255) tgtgCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGa < 1:89721/149‑1 (MQ=255) ttcTGAAGGGGGATTATTGCTCATGACCGTCTCCTTGCGGTGTGAGGTATGACAAGGGTAGACGCGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGaaa < 1:353868/147‑1 (MQ=255) ggctctaGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCCGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGaaa < 2:571301/143‑1 (MQ=255) cTGAAGGGGGATTATTAGTCATGATCGTCTCCTTGCGGTGTGAGTTATAACAAAGGTAGACGTGACTTGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGaaaaa > 2:553456/1‑149 (MQ=255) tGAAGTGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAg < 1:3604/149‑1 (MQ=255) tGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAg < 2:745274/149‑1 (MQ=255) tGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAg < 1:140617/149‑1 (MQ=255) gggggATTATTGTTTATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGTCGTCCCGGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGc < 1:768874/149‑1 (MQ=255) gATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAAc > 1:331150/1‑149 (MQ=255) gATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGAAGACGTGACTGGCGAA‑ATCTTCGCCAGCCGGTAACAGCTTTCCGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTCGAAAACGCGGCTAAc > 1:317583/1‑149 (MQ=255) ttGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAAttt < 1:139593/149‑1 (MQ=255) ggTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGc < 1:11864/149‑1 (MQ=255) gTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAACAGCGGCTAACAGTTTGcc > 1:488891/1‑149 (MQ=255) gATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCg > 2:752815/1‑149 (MQ=255) tCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACTGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGtt > 1:63496/1‑149 (MQ=255) ttGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATAACGAATTTACGGGCCAGGGTTACAGAGATAGTTGAAAAAGCGGCTCACAATTTGCCAGCCGTTGTGGAAat > 1:547984/1‑149 (MQ=255) ttGCGGTGTGAGGTATAACAAGGGGAGACGTGACTGGCGAA‑AGCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAGTTTACGGGCTAGGGTTACAGAGATATTTGAAAAAGCGGCTAACATTTTGCCAGCCGTTGTGGAAat < 2:220689/149‑1 (MQ=255) gCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAAGTGGTTTCCAACCGTTGTGGaaagta > 2:197317/1‑146 (MQ=255) gCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAatga > 1:666851/1‑149 (MQ=255) cGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGACAAAGCGGCTCACAATTTGCCCGCCGTTGTGGAAatgat < 2:189138/149‑1 (MQ=255) gtgtGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACCGCTGTACGACAGCTGTTACGAATTTACGGGCAAGGGCTACAGAGATAGTTGAAAAAGCGGCTCACAATTTGCCAGCCGTTGTGGAAAtggtga > 2:471897/1‑149 (MQ=255) gtgtGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCACGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCCGCCGTTGTGGAAAtgatga > 2:293169/1‑149 (MQ=255) gtgtGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCAGTAACAGCTTTACGACAGCGATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTAAAAAAGCGGCTAGCAATTTGCCAGCCGTTGTGGAAAtgatga > 2:38318/1‑149 (MQ=255) gtgtGAGGGATAACAAGGGTAGACGTGACTGGCGAA‑AACTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAATAATTAGCCAGCCGTTGTGGAAAtgatga < 1:511547/149‑1 (MQ=255) tgAGGTATAACAAAGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTa > 1:535959/1‑149 (MQ=255) gAGGTATAACAAGGGTAGACGTGACAGGAAAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTAGAGGGATAGTTGAAAAAGCGGCTAACAAGTTGCCAGCGGTTGTGGAAATGATGATTAc > 1:255635/1‑149 (MQ=255) aGGTATAACAAGGGTAGAGGTGACTGGCGAA‑ATCTTCGCCAGGCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACa < 1:218692/149‑1 (MQ=255) aGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACa > 1:754602/1‑149 (MQ=255) gTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAACGAATAACAATTTGCCAGCCGTTGTGGAGATGATGAGTACaac > 2:257944/1‑147 (MQ=255) aaCAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTg > 1:626749/1‑149 (MQ=255) aaCAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTg > 1:773509/1‑149 (MQ=255) aCAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTgc > 1:292701/1‑149 (MQ=255) aCAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTgc < 1:250692/149‑1 (MQ=255) aCAAGGGTAGACGTGACTGGCGAA‑AGCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTgc < 1:247047/149‑1 (MQ=255) cAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGGTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTgcg > 1:83340/1‑149 (MQ=255) cAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTgcg > 2:591237/1‑149 (MQ=255) gggTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCGCGa < 1:525099/149‑1 (MQ=255) gggTAGACGGGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCGCGa < 2:255313/149‑1 (MQ=255) tAGACGTGACTGGCGAG‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATACCGACTTTACGCGCAAGGGGTTCAGAGATAGTTGACAATTCTGTGAACAGGCGGCCATCCGTTTTGGAAATCATGATTACAACGCTCcgcgcgca > 2:552473/1‑145 (MQ=255) cGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCGCGATAAATCg > 1:686936/1‑149 (MQ=255) gACTGGCGAAGAT‑TTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCGCGATAAATCGCca > 2:373633/1‑149 (MQ=255) aCTGGCGAAGAT‑TTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCGCGATAAATCGCcac > 1:714116/1‑149 (MQ=255) aCTGGCGAAGAT‑TTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCGCGATAAATCGCcac > 1:549234/1‑149 (MQ=255) aCTGGCGAAGAT‑TTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCCCGATCAATCGcccc > 2:81488/1‑147 (MQ=255) ggCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCGCGATAAATCGCCACAAt > 2:496035/1‑149 (MQ=255) gAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCGCGATAAATCGCCACAATttc > 1:753267/1‑149 (MQ=255) aTCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCGCGATAAATCGCCACAATttcttc < 1:762853/149‑1 (MQ=255) tCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATCAGAGCCTCGCTGCGCGATAAATCGCAACAATTTCTTCg > 1:603974/1‑149 (MQ=255) | GCCAATAAAGTTGTCATAGCGGGCTTTTAACTTGAGGGGGAAACCATACTCGCCGGGCTTAATCTGTGCTGAAGGGGGATTATTGGTCATGATCGTCTCCTTGCGGTGTGAGGTATAACAAGGGTAGACGTGACTGGCGAA‑ATCTTCGCCAGTCGGTAACAGCTTTACGACAGCTATCACGAATTTACGGGCAAGGGTTACAGAGATAGTTGAAAAAGCGGCTAACAATTTGCCAGCCGTTGTGGAAATGATGATTACATCGCTGCGCGATAAATCGCCACAATTTCTTCG > NC_000913/3756421‑3756711 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |