Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,188,484 Δ27 bp coding (3136‑3162/4224 nt) rpoC → RNA polymerase, beta prime subunit

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4188484 4188510 27 82 [0] [0] 81 rpoC RNA polymerase, beta prime subunit

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 41884830 (0.000)78 (1.080) 64/286 0.1 100% coding (3135/4224 nt) rpoC RNA polymerase, beta prime subunit
?NC_000913 4188511 = 0 (0.000)coding (3163/4224 nt) rpoC RNA polymerase, beta prime subunit

CGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTCCTGCCGGGTA  >  NC_000913/4188366‑4188658
                                                                                                                                                 |                                                                                                                                                    
accttacggtgcggtactggcgaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGgtc                                                                                                                                                   <  1:1079830‑M2/4‑1 (MQ=255)
 ccttacggtgcggtactggcgaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGgtct                                                                                                                                                  >  1:425458‑M2/145‑149 (MQ=255)
 ccttacggtgcggtactggcgaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGgtct                                                                                                                                                  >  1:215506‑M2/145‑149 (MQ=255)
 ccttacggtgcgggacgggggaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGgtct                                                                                                                                                  <  2:197312‑M2/5‑1 (MQ=255)
   ttacggtgcggtactggcgaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGgtctgt                                                                                                                                                >  1:26002‑M2/143‑149 (MQ=255)
     ccggtgcggtactggcgaaaggcgatggcgaacaggttgctcgcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGgtctgtct                                                                                                                                              <  1:233774‑M2/9‑1 (MQ=255)
      cggtgcggtactggcgaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaagctgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCtt                                                                                                                                             >  2:919805‑M2/140‑149 (MQ=255)
           cggtactggcgaaaggcgatggcgaataggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCtg                                                                                                                                        <  1:129014‑M2/15‑1 (MQ=255)
             gtactggcgacaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCtggt                                                                                                                                      <  2:536370‑M2/17‑1 (MQ=255)
              tactggcgaaaggcgattgcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCtggtg                                                                                                                                     >  2:301766‑M2/132‑149 (MQ=255)
              tactggcgaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCtggtg                                                                                                                                     <  1:585921‑M2/18‑1 (MQ=255)
              tactggcgaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCtggtg                                                                                                                                     >  2:583636‑M2/132‑149 (MQ=255)
                 tggcgaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCgcgggtggct                                                                                                                                  >  1:242053‑M2/129‑147 (MQ=255)
                   gcgaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCt                                                                                                                                >  1:871844‑M2/127‑149 (MQ=255)
                   gcgaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCt                                                                                                                                >  1:394136‑M2/127‑149 (MQ=255)
                    cgaaaggggatggcgaacaggtggctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttacggacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTg                                                                                                                               <  2:439497‑M2/24‑1 (MQ=255)
                     gaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacagccagaccGGTCTGTCTTCGCTGGTGGTTCTgg                                                                                                                              <  1:698019‑M2/25‑1 (MQ=255)
                     gaaaggcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggatttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTACTgg                                                                                                                              >  2:944022‑M2/125‑149 (MQ=255)
                      aaaggcgagggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGa                                                                                                                             <  1:206391‑M2/26‑1 (MQ=255)
                          gcgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTcc                                                                                                                         >  2:112263‑M2/120‑149 (MQ=255)
                           cgatggcgaacaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtacgcggttttgtacgctttactgacatggtcgacggccggaccGGGCTGTCTTCGCTGGTGGTTCTGGGTTCCg                                                                                                                        >  2:123091‑M2/119‑149 (MQ=255)
                                    actggttgctggcggctaaaccgttgcaaactggcacccgcacaccatgccggttatcaccgaagtaagcggttttgtactctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTa                                                                                                               <  2:835303‑M2/40‑1 (MQ=255)
                                    acaggttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTa                                                                                                               <  1:327334‑M2/40‑1 (MQ=255)
                                        gttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgctcgacggccagaccGGTCTCGCTTCGCTGGTGGTTGTGGATTCCGCGGAACGTACCGc                                                                                                           >  2:591502‑M2/106‑149 (MQ=255)
                                        gttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcgggtttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATCCCGCAGAACGTACCGc                                                                                                           >  1:1188923‑M2/106‑149 (MQ=255)
                                        gttgctggcggcgaaaccgttgcaaactgggacccgcacaccatgcaggttatcaccgaagtaagcggtgttgtacgctttactgacatgatcgacggacagaacGGTCTGTCTTCGCTGGTGGTTCGCGATTCCGGAGAACggacacc                                                                                                           >  2:89095‑M2/106‑146 (MQ=255)
                                        gttgctggcggagaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGc                                                                                                           <  1:389822‑M2/44‑1 (MQ=255)
                                               gcggcgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTCCCGCAggtggt                                                                                                    >  2:1227720‑M2/99‑149 (MQ=255)
                                                   cgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtcagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGACCGTACCGCAGGTGGCAAAg                                                                                                >  2:482826‑M2/95‑149 (MQ=255)
                                                   cgaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAg                                                                                                <  1:862093‑M2/55‑1 (MQ=255)
                                                    gaaaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagaggttttgtacgctttactgacatgatcgccggccagaccGGTCTGTCTTCACTGGTTGTTCGGGATTCCGCAGAACGTACCGCAGGTGGTAAAGa                                                                                               >  2:422329‑M2/94‑149 (MQ=255)
                                                      aaccgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATc                                                                                             <  1:1105347‑M2/58‑1 (MQ=255)
                                                       accgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGGTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAGGATCt                                                                                            >  1:222123‑M2/91‑149 (MQ=255)
                                                       accgttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCt                                                                                            <  1:412140‑M2/59‑1 (MQ=255)
                                                       acccttgcaatctgggaccgtcacaccatgccggttatcaccgaagtaggcggttttgtacgcttcactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCt                                                                                            <  2:434507‑M2/59‑1 (MQ=255)
                                                           ttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGt                                                                                        >  1:1089768‑M2/87‑149 (MQ=255)
                                                           ttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGt                                                                                        >  1:1133675‑M2/87‑149 (MQ=255)
                                                           ttgcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGt                                                                                        >  1:991275‑M2/87‑149 (MQ=255)
                                                             gcaaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTcc                                                                                      >  1:360713‑M2/85‑149 (MQ=255)
                                                              ccaagtgggacccgcacaccatggcggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCtgcgtgcg                                                                                     <  2:1137986‑M2/66‑1 (MQ=255)
                                                               aaactgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAACGATCTGCGTCCgg                                                                                    >  2:387546‑M2/83‑149 (MQ=255)
                                                                 accgggacccgcacaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCa                                                                                  <  2:362509‑M2/69‑1 (MQ=255)
                                                                          cgcacaccatgccggttatcaccgaagtaagtggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGCTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATc                                                                         <  1:834666‑M2/78‑1 (MQ=255)
                                                                             taaccatgcctgttatcgccgaaggaagcggtttggtccgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATCCCGCAGAACGTACCGCATGTTGTAAAGATCTGCGTCCGGCACTGAAAATCGtt                                                                     <  2:1197493‑M2/81‑1 (MQ=255)
                                                                             acaccatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGtt                                                                     <  2:1089768‑M2/81‑1 (MQ=255)
                                                                               accatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCg                                                                        >  2:755786‑M2/67‑145 (MQ=255)
                                                                               accatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCg                                                                        <  1:755786‑M2/79‑1 (MQ=255)
                                                                               accatgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGa                                                                   <  1:4836‑M2/83‑1 (MQ=255)
                                                                                 catgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATg                                                                 <  1:558270‑M2/85‑1 (MQ=255)
                                                                                  atgccggttatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTGTGTCGTCGCGGGTGGTTCTGGATTCCGCAGAACGGACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGAGGc                                                                >  2:1187415‑M2/64‑149 (MQ=255)
                                                                                          tatcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTa                                                        <  2:344898‑M2/94‑1 (MQ=255)
                                                                                            tcaccgaagtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAac                                                      >  1:1042161‑M2/54‑149 (MQ=255)
                                                                                                    gtaagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCt                                              <  2:871844‑M2/104‑1 (MQ=255)
                                                                                                      aagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCCCTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGa                                            >  1:216198‑M2/44‑149 (MQ=255)
                                                                                                      aagcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTACCGACGTTCTGa                                            >  1:216218‑M2/44‑149 (MQ=255)
                                                                                                       agcggttttgtacgctttacttacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGAt                                           <  1:263103‑M2/107‑1 (MQ=255)
                                                                                                       agcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGAt                                           <  1:1188930‑M2/107‑1 (MQ=255)
                                                                                                       agcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGAt                                           >  1:929913‑M2/43‑149 (MQ=255)
                                                                                                       agcggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGCGAACGACGTTCTGAt                                           >  2:972212‑M2/43‑149 (MQ=255)
                                                                                                        gcggttttgtacgctttactgccatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATc                                          <  1:229474‑M2/108‑1 (MQ=255)
                                                                                                          ggttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATccc                                        <  2:682519‑M2/110‑1 (MQ=255)
                                                                                                           gttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCa                                       <  1:1054828‑M2/111‑1 (MQ=255)
                                                                                                            ttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAg                                      <  2:1133675‑M2/112‑1 (MQ=255)
                                                                                                            ttttgtacgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAg                                      >  1:214838‑M2/38‑149 (MQ=255)
                                                                                                                 cacgctcgactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGACAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGGAcc                                 >  2:154022‑M2/33‑149 (MQ=255)
                                                                                                                  acgctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATAGTGGGCTGCCAGGGTAACGACGTTCTGATCCCAGGTACCg                                <  1:301766‑M2/118‑1 (MQ=255)
                                                                                                                    gctttactgagatgttcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGat                              <  2:599746‑M2/120‑1 (MQ=255)
                                                                                                                    gctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGat                              >  2:54211‑M2/30‑149 (MQ=255)
                                                                                                                     ctttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGata                             >  1:634983‑M2/29‑149 (MQ=255)
                                                                                                                      tttactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGatat                            <  2:242053‑M2/122‑1 (MQ=255)
                                                                                                                        tactgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGc                          <  1:15077‑M2/124‑1 (MQ=255)
                                                                                                                           tgacatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGAGATGCCAg                       >  2:43400‑M2/23‑149 (MQ=255)
                                                                                                                             acatgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCGgcg                     >  2:183066‑M2/21‑149 (MQ=255)
                                                                                                                              catgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAgcgc                    >  1:991497‑M2/20‑149 (MQ=255)
                                                                                                                               atgatcgacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGGCGTTCTGATCCCAGGTACCGCTATgccaggaca                   >  1:558569‑M2/19‑145 (MQ=255)
                                                                                                                                     gacggccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTTCCGACATGCCACCGCAGgacgt             >  1:987940‑M2/13‑147 (MQ=255)
                                                                                                                                      acggacagaccGGTCTGTCTGCGCTGGTGGTTCCGGAGTCCGCCGGCCGTACCGAGGCGGGGAGAGAGCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTc            <  1:548442‑M2/138‑1 (MQ=255)
                                                                                                                                          ccagaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGAGCCCAGGTCCCGATATGCCAGCGCAGGACTTCCTGc        >  1:317291‑M2/8‑149 (MQ=255)
                                                                                                                                            cgaccGGTCCGTCTTCGCTGGTGGTTCTGGATGCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTCCTGCCg      <  1:81390‑M2/144‑1 (MQ=255)
                                                                                                                                             gaccGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTCCTGCCgg     <  1:112263‑M2/145‑1 (MQ=255)
                                                                                                                                                cGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCGGCGCAGTACTTCCTGCCGGGTa  >  2:376270‑M2/2‑149 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
CGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTCCTGCCGGGTA  >  NC_000913/4188366‑4188658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: