Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 257,908 Δ776 bp [crl] [crl]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 257908 258683 776 69 [0] [0] 69 [crl] [crl]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2579070 (0.000)67 (0.950) 56/278 0.2 100% intergenic (+8/‑769) crl/crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers
?NC_000913 258684 = 0 (0.000)pseudogene (9/331 nt) crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers

GTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATT  >  NC_000913/257767‑258055
                                                                                                                                            |                                                                                                                                                    
gtTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaa                                                                                                                                              <  1:723834‑M1/149‑9 (MQ=255)
 ttAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaag                                                                                                                                             >  1:870149‑M1/1‑140 (MQ=255)
   aaaaaTTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGACGGGCTGCACCAGGAAAAAATTTACCGCACTAGGCCCGTATATTCGTGCAGGTGtgtgcaaagat                                                                                                                                           >  1:599965‑M1/1‑138 (MQ=255)
       aTTTGCTAAATTGTGCCAATGTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatc                                                                                                                                       <  2:96830‑M1/149‑16 (MQ=255)
        tttGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatca                                                                                                                                      >  1:722378‑M1/1‑133 (MQ=255)
          tGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgat                                                                                                                                    <  1:807896‑M1/149‑19 (MQ=255)
          tGCGAAATGTTGCCAATTTGGTAAAACAGTGGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgat                                                                                                                                    <  2:178474‑M1/149‑19 (MQ=255)
           gCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgatt                                                                                                                                   <  2:971075‑M1/149‑20 (MQ=255)
             tAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACACGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataaccgattct                                                                                                                                 >  2:237784‑M1/1‑128 (MQ=255)
                        aaTTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgt                                                                                                                      >  1:87091‑M1/1‑117 (MQ=255)
                         aTTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtc                                                                                                                     <  1:644572‑M1/149‑34 (MQ=255)
                          tttGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtct                                                                                                                    <  1:1231529‑M1/149‑35 (MQ=255)
                             ggTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcacagatgatggatgctttttcgattgtctggc                                                                                                                 >  1:25507‑M1/1‑112 (MQ=255)
                              gTAAAACAGTTGCATCACAACAGGATATGCCAAGGACGCCACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggct                                                                                                                <  1:783429‑M1/149‑39 (MQ=255)
                               tAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattcatattcgattgtctggctg                                                                                                               >  1:1183360‑M1/1‑110 (MQ=255)
                                 aaaCCGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgta                                                                                                             <  1:304533‑M1/149‑42 (MQ=255)
                                 aaaCAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgta                                                                                                             >  2:769602‑M1/1‑108 (MQ=255)
                                     aGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcg                                                                                                         <  2:923991‑M1/149‑46 (MQ=255)
                                      gTTGCATCACAACAGGGGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCATTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgt                                                                                                        <  2:416192‑M1/149‑47 (MQ=255)
                                                  caGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaacc                                                                                            <  2:1233034‑M1/149‑59 (MQ=255)
                                                    ggAGATAGCAATGACGTGACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccgg                                                                                          <  1:364349‑M1/149‑61 (MQ=255)
                                                     gagaTAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggc                                                                                         >  1:555779‑M1/1‑88 (MQ=255)
                                                     gagaTAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctggatgcgtcgacgtgaaaccgga                                                                                         >  1:1030702‑M1/1‑88 (MQ=255)
                                                       gaTAGCAATGACGTTACCGAGTGGACAGCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattcttgttcgcgtgtctggcggtgtgcgtcaacgtgaaaccgggac                                                                                       >  2:649398‑M1/1‑86 (MQ=255)
                                                        aTAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattatctggctgtatgcgtcaacgtgaaaccggcacc                                                                                      >  1:957551‑M1/1‑85 (MQ=255)
                                                                   gTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggcggtatgcgtcaacgtgaaaccggcaccggaagtgcgtg                                                                           >  1:266451‑M1/1‑74 (MQ=255)
                                                                     tACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcggtaaggtgaaaccggcaccggcagtgcgtgaa                                                                         >  2:169264‑M1/1‑72 (MQ=255)
                                                                        cGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattc                                                                      <  2:510604‑M1/149‑81 (MQ=255)
                                                                                 acCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctgg                                                             >  1:280662‑M1/1‑60 (MQ=255)
                                                                                  cccGAAGAGCAGATTGATCAAAAAATTTTCCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggt                                                            <  1:53268‑M1/149‑91 (MQ=255)
                                                                                   ccGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtg                                                           <  1:1101154‑M1/149‑92 (MQ=255)
                                                                                    cGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAcgtgcaaaaataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagagcgtgaattcgggggctggtgg                                                          >  1:420255‑M1/1‑57 (MQ=255)
                                                                                     gAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggccggtgga                                                         >  2:144156‑M1/1‑56 (MQ=255)
                                                                                        gagCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatgg                                                      >  2:836187‑M1/1‑53 (MQ=255)
                                                                                        gagCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatgg                                                      <  1:881113‑M1/149‑97 (MQ=255)
                                                                                          gtcgattGATCAAAACATTTCCCGGTCTAGGCCCGTATATGCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggccgtatgcgtcaacgtgaaaccggcacccgtgaatggtgaattctggggctggtggatggag                                                    <  2:582682‑M1/146‑99 (MQ=255)
                                                                                             gATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaagtctggggctggtggatggagctg                                                 <  1:673313‑M1/149‑102 (MQ=255)
                                                                                              aTTGATCAAAACACTTTCCGCACTCGGCCCGTATATGCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctgactgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctgg                                                <  1:228977‑M1/149‑103 (MQ=255)
                                                                                              aTTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgacttctggggctggtggatggaggtgg                                                >  2:395275‑M1/1‑47 (MQ=255)
                                                                                                tggtcaaAAAATTCACCGCACTAGGGCCGTATATTAGGGAAGGTGagtgggaagatgagcggttctttgtcgatggtctggctgtatgcgtcaacgtgaaaccgggaccggaagtgcgtgaattctggggctggtggatggagctggaa                                              <  2:443105‑M1/146‑105 (MQ=255)
                                                                                                tGATCAAAAAATTTCCCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccagaagtgcgtgaattctggggctggtggatggagctggaa                                              <  2:790720‑M1/149‑105 (MQ=255)
                                                                                                tGAGCAAAAAATTTGCCGCACAAGGCCCGTATAATGATAAAGTTAagggcaaagagtatcgatgctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagggcgtgaattctggggctggtggatggagctggaa                                              <  2:442606‑M1/149‑105 (MQ=255)
                                                                                                  aTCAAAAAATTTACCGCACTAGGCCCGTATAATAGAGACGGGAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtgaacgtgaaacaggcaccggacgtgcgtgaatcctggggctggtggatggagctggaagc                                            >  1:300432‑M1/1‑43 (MQ=255)
                                                                                                   tCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcg                                           >  2:535288‑M1/1‑42 (MQ=255)
                                                                                                   acaAGAAAGTTACCGCACGAGGCCCGTATAGTCGTGAAGGTAagtgcaaagataatcgatgctttgtcgagtgtctggctgtatgcgtcaacgtgaaaccggccccggaagtgcgtgaattctggggctggtggatggagctggaagcg                                           <  2:590178‑M1/148‑108 (MQ=255)
                                                                                                    ctaaaaagtTACCGCACTAGGCCCGTATATTCGTGAAGGTAcgtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgggaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgc                                          <  2:603985‑M1/147‑109 (MQ=255)
                                                                                                     aaaaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgca                                         >  1:1236536‑M1/1‑40 (MQ=255)
                                                                                                      aaaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcag                                        >  1:192064‑M1/1‑39 (MQ=255)
                                                                                                      aaaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttagattgtctggctgtatgcgtcaacgtgaaaccggcaccgggagtgcgtgaattctggggcgggtggatgggggtggaaggggag                                        >  2:241858‑M1/1‑39 (MQ=255)
                                                                                                       aaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaacccgcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcagg                                       >  2:692123‑M1/1‑38 (MQ=255)
                                                                                                          aTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggagggagctggaagcgccgggat                                    >  2:541565‑M1/1‑35 (MQ=255)
                                                                                                              aCCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttttttttttttgctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggctggcgctggaagcgccggaatcccg                                >  2:846370‑M1/1‑31 (MQ=255)
                                                                                                               ccGCACTGGGCCCGTATATTTGTGAAGGGAagtgcaaagagaatcgattttgtttcgattggctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgt                               <  1:49831‑M1/149‑120 (MQ=255)
                                                                                                               ccGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggcagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgt                               <  1:357348‑M1/149‑120 (MQ=255)
                                                                                                                 gCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgggaattctggggctggcgggtggagctggacgcgcaggaatcccggtt                             >  1:728931‑M1/1‑28 (MQ=255)
                                                                                                                  cattaggCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctgggggatggagctgggcgcgcagggatcccgtttt                            >  2:530354‑M1/4‑27 (MQ=255)
                                                                                                                   aCTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgtttta                           <  2:643241‑M1/149‑124 (MQ=255)
                                                                                                                    cTAGGCCCGTATATTCGTGAAGGTAagggcaaagataatcgatgctttttcgattgtctggctggatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttac                          <  2:592678‑M1/149‑125 (MQ=255)
                                                                                                                       ggCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctatatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttaccta                       <  1:464311‑M1/149‑128 (MQ=255)
                                                                                                                          ccGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacag                    >  1:650600‑M1/1‑19 (MQ=255)
                                                                                                                          ccGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacag                    <  1:1194713‑M1/149‑131 (MQ=255)
                                                                                                                           cGTATATTCGTGAAGGTAagtgcaaagataatcgattcttttttgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagt                   >  1:81989‑M1/1‑18 (MQ=255)
                                                                                                                           actatattCGGGAAGGTAagtgcaaagataatcgattctttttcgactgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagt                   <  1:411729‑M1/147‑132 (MQ=255)
                                                                                                                              atatTCGTGAAGGTAagtgcaaagataatcgattcttttttttttttttttctgtatgagtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctgtaagctcaggaatcccatattacatacagttac                >  2:1128356‑M1/1‑15 (MQ=255)
                                                                                                                                atTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttacca              <  2:87091‑M1/149‑137 (MQ=255)
                                                                                                                                atTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagtcacca              <  1:431784‑M1/149‑137 (MQ=255)
                                                                                                                                atTCGTGAAGGGAagtgcaaagagtatttgttctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttacca              <  1:839489‑M1/149‑137 (MQ=255)
                                                                                                                                     tGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttg         <  1:1235245‑M1/149‑142 (MQ=255)
                                                                                                                                            aagtgccaagataatggattctttttcgattgtcgggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgtt  <  2:104516‑M1/149‑149 (MQ=255)
                                                                                                                                            |                                                                                                                                                    
GTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATT  >  NC_000913/257767‑258055

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.