New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1207790 =6 (0.060)73 (0.880) 55/262 0.6 93.4% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 1209619 = 5 (0.060)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

Only 100 of 182 total aligned reads displayed.

CAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGG  >  NC_000913/1207644‑1207938
                                                                                                                                                  |                                                                                                                                                     
cAGCGCGGTGCAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTTGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAAAGGCTCTCGAAAACCTTG                                                                                                                                                     <  2:134827‑M1/149‑1 (MQ=255)
    gtggtgGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGCTACGCCGCATTATTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTT                                                                                                                                                 <  1:749787‑M1/149‑1 (MQ=255)
    ctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgcaatttgcttgttatttcttcattttcataaacgTTGGttt                                                                                                                                                 <  1:1448454‑M1/7‑1 (MQ=255)
        tggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGGCCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA                                                                                                                                             >  1:1423573‑M1/1‑149 (MQ=255)
         cagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGgag                                                                                                                                            <  2:1288254‑M1/12‑1 (MQ=255)
            ttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAg                                                                                                                                         <  1:206490‑M1/15‑1 (MQ=255)
             tcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAgg                                                                                                                                        >  2:333445‑M1/134‑149 (MQ=255)
             gCATCCGGGGCCAGCCTGGAGAAGGGGCGGCACCACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGG                                                                                                                                        >  1:1137667‑M1/1‑149 (MQ=255)
              cagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGa                                                                                                                                       >  1:425163‑M1/133‑149 (MQ=255)
               agcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAg                                                                                                                                      >  1:876408‑M1/132‑149 (MQ=255)
                tCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGGTTGGGAGCAGGctc                                                                                                                                     >  2:576191‑M1/1‑146 (MQ=255)
                  cGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctg                                                                                                                                   >  1:763051‑M1/1‑144 (MQ=255)
                    attacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCaaaa                                                                                                                                >  2:1248105‑M1/127‑149 (MQ=255)
                    attacgttgtaaatctatgttcaggccatttgttgatacgcgtacatagccaataagcatgttaaatccccctgctaaacgcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCaaaa                                                                                                                                >  2:1248388‑M1/127‑149 (MQ=255)
                     ttacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAAc                                                                                                                               <  1:1339178‑M1/24‑1 (MQ=255)
                         gttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTtggttggg                                                                                                                                               <  1:191354‑M1/9‑4 (MQ=255)
                         gttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTgg                                                                                                                                               >  2:191354‑M1/122‑130 (MQ=255)
                         ggcCTGGAGGAGGGGGGGCACTACCAGTTACTTGCCGTACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCATTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAGGGctctgcattacc                                                                                                                            <  2:184599‑M1/148‑13 (MQ=255)
                         aGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCCCTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacc                                                                                                                            <  2:847539‑M1/149‑13 (MQ=255)
                          gCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatgacct                                                                                                                           >  2:1133103‑M1/1‑136 (MQ=255)
                             tGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgtt                                                                                                                        >  1:588946‑M1/1‑133 (MQ=255)
                                agaAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggt                                                                                                                     <  2:807936‑M1/149‑20 (MQ=255)
                                  ctttgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAAc                                                                                                                  >  2:352702‑M1/113‑149 (MQ=255)
                                   tgtgttctgggcatttgttgatacgtgtaaatagccaataagcatgttaaaccaccctggtaaaggcaggaatgatgccatttgcttgttatttcttcactttcatgaacgTTGGTTTGGGAGAAGGAGCAAAACTCTGTGCAGCAACg                                                                                                                 >  2:900167‑M1/112‑149 (MQ=255)
                                   aGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtc                                                                                                                  <  2:766488‑M1/149‑23 (MQ=255)
                                     gggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtccc                                                                                                                >  1:1023962‑M1/1‑125 (MQ=255)
                                     gggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtccc                                                                                                                <  1:1263461‑M1/149‑25 (MQ=255)
                                      ggcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccg                                                                                                               <  2:1496116‑M1/149‑26 (MQ=255)
                                      ggcggcACGACCACTTACTTACCGCACGTCGCTCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCt                                                                                                              <  2:692649/149‑1 (MQ=255)
                                       gcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccgg                                                                                                              >  1:548965‑M1/1‑123 (MQ=255)
                                          gcACGACCAGTTACTTCGCGCACTTGGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttc                                                                                                           <  2:33362‑M1/149‑30 (MQ=255)
                                          gcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGGGAAGGctgtgcattacctgttggtgtcccggttc                                                                                                           >  1:659331‑M1/1‑120 (MQ=255)
                                           ggtcatttgttggtacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAACCTCAATGCAGCAACGGCTACAtt                                                                                                         >  2:757802‑M1/104‑149 (MQ=255)
                                               aCCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtgg                                                                                                      <  1:921944‑M1/149‑35 (MQ=255)
                                                tttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTCCATTAGGAc                                                                                                    <  2:95246‑M1/51‑1 (MQ=255)
                                                    ttacttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcctgc                                                                                                 >  2:199652‑M1/1‑110 (MQ=255)
                                                    ttacttacCGCACTTCCGGCGCTGCTCTTAAGCCGCAAGAATACGTCTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCCCTCGAAAACCTTGGTTCGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttc                                                                                                 <  2:642472‑M1/149‑40 (MQ=255)
                                                     tacttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttca                                                                                                <  1:874527‑M1/149‑41 (MQ=255)
                                                      gatacgcgtacatagccaataagcatgttaaatccccctggtaaaaacaggaatgatgccatttgcctgttatttcttcatattcataaacgTTGGTTTGGGAGAAGGCGCAAAAACCACTGCAGCCAACGCCACCTTTGGACGCACCg                                                                                              <  1:222914‑M1/57‑1 (MQ=255)
                                                       cttcgcgcactTCGCGCGGTGCTGTTAAGCCGCAAGAATCCGTTGTGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagc                                                                                              <  2:213939‑M1/144‑43 (MQ=255)
                                                       cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggtgccgtggcgttcagc                                                                                              >  2:243049‑M1/1‑107 (MQ=255)
                                                       atacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCgg                                                                                             <  1:564868‑M1/58‑1 (MQ=255)
                                                        ttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcc                                                                                             >  1:1027879‑M1/1‑106 (MQ=255)
                                                         tacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgctggtgacgcgggtccgtggacttcagcca                                                                                            >  2:1163776‑M1/1‑105 (MQ=255)
                                                         acgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTGCATTAGGACGCCGCGGtt                                                                                           <  2:880587‑M1/60‑1 (MQ=255)
                                                          acCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccac                                                                                           >  1:1445741‑M1/1‑104 (MQ=255)
                                                           gcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc                                                                                         >  1:598349‑M1/88‑149 (MQ=255)
                                                            cgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCa                                                                                        >  2:1534861‑M1/87‑149 (MQ=255)
                                                               acatagccaataagcatgttaaatccctctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                                                                                     >  1:1084489‑M1/84‑149 (MQ=255)
                                                               aCTTCGCGCGTCGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgc                                                                                      <  2:121708‑M1/149‑51 (MQ=255)
                                                                  tagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgatggttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCta                                                                                  <  1:442743‑M1/69‑1 (MQ=255)
                                                                  tCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGGTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaa                                                                                   >  1:35273‑M1/1‑96 (MQ=255)
                                                                      cattactcattttaaatccccctggtaaattcaggaatgatgccatttgattgttacttcttccttttcataaacgTTGGTTTGGGAGAAGCAGCAAAACTCCATGTAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAcc                                                                              >  2:151808‑M1/77‑149 (MQ=255)
                                                                       aataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGAAGATTGTTACAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCg                                                                             <  1:1526797‑M1/74‑1 (MQ=255)
                                                                         ctgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctg                                                                            <  2:1452062‑M1/149‑61 (MQ=255)
                                                                          tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgttgccttcagccactccgccaacaggctgg                                                                           >  1:1361440‑M1/1‑88 (MQ=255)
                                                                          tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctgg                                                                           >  1:1513436‑M1/1‑88 (MQ=255)
                                                                             catgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaccgTTGGTTTGGGAGAAGGAGCAAAACTCATTGCAGCAACGGCTACATTAGGACGCACCGGTTGCATAGCCAGACGGGTTATg                                                                       <  2:826742‑M1/80‑1 (MQ=255)
                                                                             catgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATg                                                                       <  2:466700‑M1/80‑1 (MQ=255)
                                                                              atgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGa                                                                      <  2:502216‑M1/81‑1 (MQ=255)
                                                                               ttcagccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaa                                                                      <  1:697993‑M1/146‑67 (MQ=255)
                                                                               tgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt                                                                     >  1:795756‑M1/68‑149 (MQ=255)
                                                                                   taatccccctggtaaacgcggtaatgttgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCATAATTCATTGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                                 >  2:560629‑M1/64‑149 (MQ=255)
                                                                                    aatccccctggtaacagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg                                                                >  1:18645‑M1/63‑149 (MQ=255)
                                                                                    aatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg                                                                >  1:661126‑M1/63‑149 (MQ=255)
                                                                                     atccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtgg                                                               <  2:923952‑M1/88‑1 (MQ=255)
                                                                                      gCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccaccccgccaacaggctggctgaaatgcaat                                                               >  2:583239‑M1/1‑76 (MQ=255)
                                                                                         cgctggtaaaagtaggaatgatgccatttgcttgttatttcttctttttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt                                                           >  2:586310‑M1/58‑149 (MQ=255)
                                                                                         ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt                                                           >  1:169496‑M1/58‑149 (MQ=255)
                                                                                         aGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggt                                                            <  2:910730‑M1/149‑77 (MQ=255)
                                                                                           ctggtaaaagcaggaatgatgccattttcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGCTTGTGATTGGTGGTATTGa                                                         >  1:974913‑M1/56‑149 (MQ=255)
                                                                                            tgttaaatgcaggaatgatgccatttgcttgttatttcttcattttcataagcgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAg                                                        >  2:676354‑M1/55‑149 (MQ=255)
                                                                                              gtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCa                                                      <  2:432431‑M1/97‑1 (MQ=255)
                                                                                                 aaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACTGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATc                                                   <  1:1054725‑M1/100‑1 (MQ=255)
                                                                                                   tggggttatcaaatcGGAGGGCACTGTGGAAACGGCTTCCGAAACCCTTGGTTTGGGAGAAGGctttggattacctgttggtgtcccggtcccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttttt                                                  <  2:685137‑M1/143‑87 (MQ=255)
                                                                                                   agcgggaatggtgccagttgcttgttttttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAGTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAg                                                 >  1:728499‑M1/48‑149 (MQ=255)
                                                                                                      cGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctg                                               >  1:257734‑M1/1‑60 (MQ=255)
                                                                                                       gATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccgtcagccactccgcccacaggctggctgaaatgcaatggtgccgctttttctgc                                              <  2:1338585‑M1/149‑91 (MQ=255)
                                                                                                        atatCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgct                                             >  1:813933‑M1/1‑58 (MQ=255)
                                                                                                        atatCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATc                                            <  2:1423573/149‑1 (MQ=255)
                                                                                                           tCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaa                                          >  2:457548‑M1/1‑55 (MQ=255)
                                                                                                              tgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACAGGTTTCCTAGCTATCCCGGTTATGATTGGTGGTATTGCGCAATCCGTACTCAttcgg                                      <  1:314370‑M1/113‑3 (MQ=255)
                                                                                                                tCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaata                                     >  1:1220197‑M1/1‑50 (MQ=255)
                                                                                                                 catttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgg                                   >  1:859765‑M1/34‑149 (MQ=255)
                                                                                                                 cGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatac                                    <  2:1023962‑M1/149‑101 (MQ=255)
                                                                                                                     tGGCACTGTGCAAACGGCTGTCGAAACCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccgg                                <  2:1175253‑M1/149‑105 (MQ=255)
                                                                                                                       cttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTgg                             <  1:884335‑M1/122‑1 (MQ=255)
                                                                                                                             tgCAAACGGCCCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggca                        <  1:515164‑M1/149‑113 (MQ=255)
                                                                                                                             atttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc                       >  1:239785‑M1/22‑149 (MQ=255)
                                                                                                                             atttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc                       >  1:999417‑M1/22‑149 (MQ=255)
                                                                                                                               cAACCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaa                      <  1:333020‑M1/149‑115 (MQ=255)
                                                                                                                                 aaCGGCTGTCGAAAGCCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaa                   <  1:618592/149‑1 (MQ=255)
                                                                                                                                 aaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaagg                    <  2:1445741‑M1/149‑117 (MQ=255)
                                                                                                                                     attttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGc               <  1:1182207‑M1/136‑1 (MQ=255)
                                                                                                                                          cGAAAACCTTGGTTTGGGAGAAGGctctgcattaccggttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccga           >  2:671403‑M1/1‑24 (MQ=255)
                                                                                                                                           gAAAACCTTGGTTTGGGAGAAGGctgtgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgac          >  1:779991‑M1/1‑23 (MQ=255)
                                                                                                                                           gAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgt                                                                                                        <  2:269226‑M1/55‑33 (MQ=255)
                                                                                                                                           ataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGc         <  2:389801‑M1/142‑1 (MQ=255)
                                                                                                                                            aaaaCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgaca         <  2:108361‑M1/149‑128 (MQ=255)
                                                                                                                                               aCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaat      <  2:548965‑M1/149‑131 (MQ=255)
                                                                                                                                                  |                                                                                                                                                     
CAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGG  >  NC_000913/1207644‑1207938

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.