New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3534494	47 (1.050)	3 (0.070)	3/254	NT	6.4%	intergenic (+56/+20)	pck/envZ	phosphoenolpyruvate carboxykinase [ATP]/sensory histidine kinase in two‑component regulatory system with OmpR
	?	NC_000913	= 3534500	45 (1.090)					intergenic (+62/+14)	pck/envZ	phosphoenolpyruvate carboxykinase [ATP]/sensory histidine kinase in two‑component regulatory system with OmpR

GGCGAAACTGTTTATCGACAACTTCGATAAATACACCGACACCCCTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGGCGCGAATGGAAAGCCCGCCCCGCTCGCTGGTGCCAAGCTCCAGCATCCCGTTATGGTTATCCACGATACGCTGCACAATT  >  NC_000913/3534354‑3534646                                                                                                                                                   |                                                                                                                                                   ggCGAAACTGTTTATCGACAACTTCGATAAATACACCGACACCCCTGCGGGTGACCTGCTCGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCgc                                                                                                                                                  >  1:582471‑M2/1‑147 (MQ=255) cgcGAAACTGTTTATCGACAACCTCGATAAACACACCGACACCCCTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCgc                                                                                                                                                  >  1:205925‑M2/2‑147 (MQ=255)   cGAAACTGTTTATCGACAACTTCGATAAATACACCGACACCCCTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCgcct                                                                                                                                                <  1:687480‑M2/149‑5 (MQ=255)   cGAAACTGTTTATCGACAACTTCGATAAATACACCGACACCCCTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCCTCgcgt                                                                                                                                                <  1:697568‑M2/149‑5 (MQ=255)   cGAAACTGTTTATCGACAACTTCGATAAATACACCGACACCCCTGCGGGTGCCGCGCTGGGAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATACCGCTCCAGTATCTTATAGAAAGCGCAACGGGAAGCCCCTTCgcct                                                                                                                                                <  2:277259‑M2/149‑5 (MQ=255)       aCTGTTTATCGACAACTTCGATAAATACACCGACACCCCTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGCAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCgcctcccg                                                                                                                                            <  1:540827‑M2/149‑9 (MQ=255)         tgtgTATCGACAACTTCGATAAATACACCGACACCCCTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCgcctcccgtt                                                                                                                                          >  1:739519‑M2/1‑139 (MQ=255)          gTTTATCGACAACTTCGATAAATACACCGACACCCCTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATACCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCgcctcccgttt                                                                                                                                         <  2:649904‑M2/149‑12 (MQ=255)            ttATCGACAACTTCGATAAATACACCGACACCCCTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGACACTGTAATGCTTTGAAGCTGGAGCATATCTATCCAGTATCTTCTAGAAAACAAAACGGGAGGCCCCTCCgcctcccgtcact                                                                                                                                       <  1:763223‑M2/149‑14 (MQ=255)            ttATCGACAACTTCGATAAATACACCGACACCCCTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGCGGCACCTTCGCCTCCCGtttat                                                                                                                                       >  1:80447/1‑149 (MQ=255)            ttATCGACAACTTCGATAAATACACCGACACCCATGCGGGTGCCGCTCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAACACGGGAGGCACCTTCGCCTCCCGtttat                                                                                                                                       <  2:562742/149‑1 (MQ=255)              agcGACAACTTCGATAAATACACCGACACCCCTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGtttattt                                                                                                                                     <  1:131354/147‑1 (MQ=255)                cGACAACTTCGATAAATCTGCCGACACCCCTGCGGGTGTCGCGCTGGTAGCGGCTGGTCCTAAACTGTAATTATTTTAATCTGTAGAATATCGATCCAGTATCTTAGAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTAc                                                                                                                                   <  2:179559/149‑1 (MQ=255)                cGACAACTTCGATAAATACACCGACACCCCTGCGGGTGCCGCGCTGGTAGCGGCTGGCCCTAGACGTTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTAc                                                                                                                                   <  1:786367/149‑1 (MQ=255)                       ttCGATAAATACACCGACACCCCTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCcttctt                                                                                                                            >  2:434272/1‑149 (MQ=255)                          gATAAATACACCGACACCCCTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGACACTGTAATGATTTGAGGCTGGAGAATATCGGTCCAGTATCTTATAGAAAGCGAGGCGGGGGGCACGTTCGCCTCCCGTTTATTTACCCTTCTTTTg                                                                                                                         <  2:587069/149‑1 (MQ=255)                          gATAAATACACCGACACCCCTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGCGAATATCTATCCAGTATCTTATAGAAAGCATAACGGGAGGCACCTTCGCCGCCCGTTTACTTACCCTTCTTTTg                                                                                                                         <  2:361074/149‑1 (MQ=255)                            tAAATACACCGACACCCCTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTc                                                                                                                       <  1:612672/149‑1 (MQ=255)                                     cGACACCCCGGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTgc                                                                                                              <  1:481689/149‑1 (MQ=255)                                          tgcctgCGGGTGCCGGGGTGGTTGTGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCGAAGGTgcctcccgttttgctttctataagatactggatagatattctc                                                                                                         >  2:167323‑M2/3‑106 (MQ=255)                                           cccTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCcgc                                                                                                        >  2:15119/1‑149 (MQ=255)                                           cccTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCcgc                                                                                                        >  1:728745/1‑149 (MQ=255)                                           cccTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCcgc                                                                                                        >  1:728744/1‑149 (MQ=255)                                           cccTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCcgc                                                                                                        >  1:338789/1‑149 (MQ=255)                                           cccTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCcgc                                                                                                        >  1:711395/1‑149 (MQ=255)                                           cccTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCCCCCGATTATTTACCCTTCTTTTGTCGTGCCCTGCGCCcgc                                                                                                        >  2:85304/1‑149 (MQ=255)                                            ccTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCGAAGGTgcctcccgttttcctttctataagatactggatagatattctcca                                                                                                       <  1:167323‑M2/149‑46 (MQ=255)                                             cTGCGGGGGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCCGGAGAACATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCGAAGGTgcctcccgttttgctttctataagatactggatagatattctccag                                                                                                      >  1:64628‑M2/1‑103 (MQ=255)                                                      ccGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTAGCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCAc                                                                                             <  1:474885/149‑1 (MQ=255)                                                       cgcgCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCCCt                                                                                            >  1:683555/1‑149 (MQ=255)                                                         cgcTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAGAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCATGCCCTGCGCCCGCGTTACCGGCACTgg                                                                                          <  1:427318/149‑1 (MQ=255)                                                         cgcTGGGAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTgg                                                                                          <  2:213332/149‑1 (MQ=255)                                                           ctgtgaGCGGCTGGTCCGAAACTGGAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCa                                                                                        <  1:482711/144‑1 (MQ=255)                                                              gTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGcc                                                                                     >  2:752298/1‑149 (MQ=255)                                                                 gCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAgg                                                                                  >  1:292432/1‑149 (MQ=255)                                                                    gCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTCCCCCGCGCCCGCGTTACCGGCACTGGCAGCCAGgcgc                                                                               <  1:509203/149‑1 (MQ=255)                                                                     cTGGTCCGTATCCGTAATGGTTTGATTCTGGATAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGGcgcg                                                                              <  1:578468/149‑1 (MQ=255)                                                                        gtgcGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCCCTGGCAGCCAGGCGCGAAt                                                                           >  2:406581/4‑149 (MQ=255)                                                                        gTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGGCGCGAAt                                                                           >  1:127657/1‑149 (MQ=255)                                                                         tCCGAAACTGTAATGATTCGAAGCTGGAGAATATCTATCCAGTATCTCATCGAAAGCAAAACGGGAGGCACCTCCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGACAGCCAGGCGCGAATg                                                                          <  2:523630/149‑1 (MQ=255)                                                                            gAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACATTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCTCGCTTTACCGGCACTGGCAGCCAGTCGCGAATGGaa                                                                       >  2:448991/1‑149 (MQ=255)                                                                                  gTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGGCGCGAATGGAAAgcccg                                                                 >  1:656591/1‑149 (MQ=255)                                                                                      tGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGTGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGGCGCGGATGGAAAGcccgcccc                                                             >  1:549465/1‑149 (MQ=255)                                                                                      tGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGTGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGGCGCGAATGGAAAGcccgcccc                                                             >  1:549708/1‑149 (MQ=255)                                                                                      tGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCATGCCGTATAGTTACCCTGCTTTTGTCGTGCCCTGCGCCCGCGCTACCGGCACTGGCCGCCAGGGGCGAAGGGAAAgccccgccc                                                             >  2:373239/1‑144 (MQ=255)                                                                                                cTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGGCGCGAATGGAAAGCCCGCCCCGCTCGCGGGt                                                   >  2:289111/1‑149 (MQ=255)                                                                                                 tGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTGCCGGCACTGGCAGCCAGGCGCGAATGGAAAGCCCCCCCCGCTCGCAGGTg                                                  >  1:308344/1‑149 (MQ=255)                                                                                                   gagaATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGGCGCGAATGGAAAGCCCGCCCCGCTAGCTGGTGcc                                                >  1:342812/1‑149 (MQ=255)                                                                                                     gaATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTCCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGCCGACCAACGAGAGCCCGCCCCGCTCGCTGGTGCCaa                                              <  2:371390/149‑1 (MQ=255)                                                                                                         ctctatgCAGTATCTGATAGAAAGCAAAACGGGCGGCACTTGCGCCTCCGGTGTATTTACCCTTCTTTTGTCGTGCCCTTCGCCCCCGTTACCGGCACTGGCAGCCAGGCGCGAATGGGAAGCCCGCCCCGCTCGCTGGTGCCAAGCTc                                          <  1:240558/148‑1 (MQ=255)                                                                                                         atctatcCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGGCGCGAATGGAAAGCCCGCCCCGCTCGCTGGTGCCAAGCTc                                          <  2:540827/149‑1 (MQ=255)                                                                                                           ctatcCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGGCGCGAATGGAAAGCCCGCCCCGCTCGCTGGTGCCAAGCTCCa                                        <  1:15119/149‑1 (MQ=255)                                                                                                              tcCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGGCGCGAATGGAAAGCCCGCCCCGCTCGCTGGTGCCAAGCTCCAGCa                                     >  2:481368/1‑149 (MQ=255)                                                                                                                ccgTATCTTATCGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGGCGCGAATGGAAAGCCCGCCCCGCTCGCTGGTGCCAAGCTCCAGCATc                                   <  2:453220/147‑1 (MQ=255)                                                                                                                cAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGGCGCGAATGGAAAGCCCGCCCCGCTCGCTGGTGCCAAGCTCCAGCATc                                   <  1:138985/149‑1 (MQ=255)                                                                                                                       ttATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGGCGCGAATGGAAAGCCCGCCCCGCTCGCTGGTGCCAAGCTCCAGCATCCCGTTAt                            >  1:761892/1‑149 (MQ=255)                                                                                                                          taGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGGCGCGAATGGAAAGCCCGCCCCGCTCGCTGGTGCCACGCTCCAGCATCCCGCTACGGt                         >  2:500728/1‑149 (MQ=255)                                                                                                                           aGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGGCGCGAATGGAAAGCCCGCCCCGCTCGCTGGTGCCAAGCTCCAGCATCCCGTTATGGtt                        >  1:627473/1‑149 (MQ=255)                                                                                                                                        ggAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGGCGCGAATGGAAAGCCCGCCCCGCTCGCTGGTGCCAAGCTCCACCATCCCGTTATGGTTATCCACGATACGc           <  1:481368/149‑1 (MQ=255)                                                                                                                                         gAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGGCGCGAATGGAAAGCCCGCCCCGCTCGCTGGTGCCAAGCTCCAGCATCCCGTTATGGTTATCCACGATACGCt          <  1:434272/149‑1 (MQ=255)                                                                                                                                                cTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGGCGCGAATGGAAAGCCCGCCCCGCTCGCTGGTGCCAAGCTCCAGCATCCCGTTATGGTTATCCACGATACGCTGCACAAt   >  1:177827/1‑149 (MQ=255)                                                                                                                                                 ttCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGGCGCGAATGGAAAGCCCGCCCCGCTCGCTGGTGCCAAGCTCCAGCATCCCGTTATGGTTATCCACGATACGCTGCACAAtt  <  1:695092/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                   GGCGAAACTGTTTATCGACAACTTCGATAAATACACCGACACCCCTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAATGATTTGAAGCTGGAGAATATCTATCCAGTATCTTATAGAAAGCAAAACGGGAGGCACCTTCGCCTCCCGTTTATTTACCCTTCTTTTGTCGTGCCCTGCGCCCGCGTTACCGGCACTGGCAGCCAGGCGCGAATGGAAAGCCCGCCCCGCTCGCTGGTGCCAAGCTCCAGCATCCCGTTATGGTTATCCACGATACGCTGCACAATT  >  NC_000913/3534354‑3534646

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.