| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1469240 | NA (NA) | 42 (0.930) | 31/276 | NT | 100% | intergenic (‑91/‑1) | insC1/ydbA | IS2 repressor TnpA/pseudogene, autotransporter homolog; interrupted by IS2 and IS30 |
| ? | NC_000913 | = 1652258 | 0 (0.000) | pseudogene (708/1158 nt) | intQ | pseudogene, Qin prophage; phage integrase family;Phage or Prophage Related | |||||
Only 100 of 103 total aligned reads displayed.
GTTCGCCCTGGTGAGCTGTGTGCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGAGAGTA > NC_000913/1652112‑1652402 | aaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatttgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGc < 1:494837‑M2/7‑1 (MQ=255) ccttgcagaggcgttcgcgcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagtgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCa > 2:693393‑M2/141‑149 (MQ=255) ccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtcaagggttaagtgataacagatatctggcaatataggggcaaatccATTAAGCCa > 2:441149‑M2/141‑149 (MQ=255) cttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatattggggcaaatccATTAagcccg > 2:7578‑M2/140‑147 (MQ=255) cttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggatatcgctcgccacgggaatatctgcggcagcgggcttgtaatggggtaagtgataacaggtgtctggaaatataggcgcaaatgcATTAAGCCAg > 2:196200‑M2/140‑149 (MQ=255) cGCCCTGGTGAGCTGTGTGCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGCTGATCAGGAGAAATTTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTAATTAAGtagac < 1:67240‑M2/149‑6 (MQ=255) agaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAatg > 2:399652‑M2/135‑148 (MQ=255) aggcgttcgagcagtataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGa < 2:681957‑M2/17‑1 (MQ=255) gttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGct > 1:122832‑M2/129‑149 (MQ=255) gttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaaagggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACgcc > 2:634719‑M2/129‑148 (MQ=255) cTGTGTGCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAC‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaa < 1:377189‑M2/149‑18 (MQ=255) gagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggccgcgggcttgtactgggttaagtgataacagatgtctggaaaaataggggcaaatccATTAAGCACGCAATCGAGGCTGTcc > 2:89872‑M2/125‑149 (MQ=255) gagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTcc > 2:322384‑M2/125‑149 (MQ=255) gCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctcca > 1:756415‑M2/1‑126 (MQ=255) cACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccag < 2:144240‑M2/149‑25 (MQ=255) cACTTGGATGGGAGGACATAGATCTGAAAAAAGGAACAATGATGATCAGGAGAAATTTAGCACA‑AGACCGCTTCACGGTACAAAAAACACACGCGGGAACCAAACCGGGCATCCATCCAATAAAGtagactggcccccgaaatctccag < 2:270294‑M2/149‑25 (MQ=255) aCGTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccaga > 2:419363‑M2/1‑124 (MQ=255) ttGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagaca < 1:729608‑M2/149‑28 (MQ=255) taacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatctctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccCTTAAGCCAGCAATCGACGCCACCCGGAGGCAg > 2:506763‑M2/117‑149 (MQ=255) gATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaacc < 2:234678‑M2/149‑31 (MQ=255) aTGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCTAACAGAAAGGC‑CACTGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaacca > 1:786497‑M2/1‑118 (MQ=255) gggAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaat > 1:375516‑M2/1‑116 (MQ=255) gggAGGACATAGATCCGAAAAATGGAACCATGATGATCAGGAGAAATTTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaat > 2:706889‑M2/1‑116 (MQ=255) atggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACa < 1:655126‑M2/39‑1 (MQ=255) gaggaCATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatat < 2:8919‑M2/149‑36 (MQ=255) gaggaCATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAA‑AGACCGATTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTAATTAAGtagactggccccctgaatctcccgacaaccaatat < 1:397592‑M2/149‑36 (MQ=255) ggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACAtt < 1:695730‑M2/41‑1 (MQ=255) atccggatagtgcgcttggttagccctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAAc < 2:311637‑M2/44‑1 (MQ=255) atccgcatggggcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAAc < 2:311758‑M2/44‑1 (MQ=255) atccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATAAATTTACAATTGACGCTCTCCGGAGTCAGATGACATTAAc < 1:793428‑M2/44‑1 (MQ=255) aCATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcact > 2:536835‑M2/1‑110 (MQ=255) gATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttattt > 1:396165‑M2/1‑105 (MQ=255) gATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttattt > 2:490675‑M2/1‑105 (MQ=255) tGAAAAATGGCACAATGATGATCAGGAGAAATCTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagt > 2:185236‑M2/1‑101 (MQ=255) tGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagt < 2:69667‑M2/149‑49 (MQ=255) gtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGCCTGAg > 2:82873‑M2/97‑149 (MQ=255) aaaaaTGGAACAATGATGATCAGGAGAAATTTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtga < 2:574439‑M2/149‑51 (MQ=255) cgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCaa < 1:475130‑M2/56‑1 (MQ=255) cgctgggttatcgatcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTTCGGAGTCAGATGACATTAACGAGACTGAGCaa > 1:544763‑M2/94‑149 (MQ=255) cgcggggttatggctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCaa < 1:701256‑M2/56‑1 (MQ=255) tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGGCTGAGCAAaga > 2:683559‑M2/91‑149 (MQ=255) tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAaga > 1:593015‑M2/91‑149 (MQ=255) aTGGAACATTGATGGTCCGGGTGAATGTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagt > 1:145987‑M2/1‑95 (MQ=255) aTGGAACAATGATGATCAGGAGAAATTTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagt > 1:467223‑M2/1‑95 (MQ=255) aaTGATGATCAGGAGAAATTTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaata < 1:779069‑M2/149‑62 (MQ=255) atgatgATCAGGAGAAATTTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatac < 1:246755‑M2/149‑63 (MQ=255) ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAAGCAAAACAAAAAGCATATCAtt > 1:184818‑M2/81‑149 (MQ=255) ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaactgctaacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCAtt > 2:191157‑M2/81‑149 (MQ=255) acgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGtt > 1:169519‑M2/75‑149 (MQ=255) ggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCAc > 2:46299‑M2/72‑149 (MQ=255) aaTTTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactag > 2:186132‑M2/1‑72 (MQ=255) aTTTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagt > 1:144240‑M2/1‑71 (MQ=255) tctgcggcggcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCaga < 2:233681‑M2/84‑1 (MQ=255) ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaagtatagggggaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAGGAGCATATCATTGATGTTCacttcgggg > 2:644430‑M2/65‑145 (MQ=255) ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatgtaggggcaaatccATTGAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTCAAGCGCATGGGCAAAGAGCATATCGTTGGTGTTCACATTagag > 2:263071‑M2/65‑149 (MQ=255) tgcggcggcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCagaga < 1:17458‑M2/86‑1 (MQ=255) tgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCagaga > 2:289757‑M2/64‑149 (MQ=255) cgcggccgcgggctggtaatgggttaagtgataacagatgtctggaaagataggggcaaatccATTAAGCCAGCAATCGACGCCCTCCGGAGTCAGACCACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCagaga < 1:17482‑M2/86‑1 (MQ=255) ggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCCCTTCAGAGAGTa > 2:546697‑M2/61‑149 (MQ=255) cAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAGGtagactggccccctgagtctccagacaaccaatatcacttaaataagtgatagtattaatactattttttagcctattcatttg < 2:30696‑M2/149‑85 (MQ=255) aaa‑aGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgga < 1:493482‑M2/149‑86 (MQ=255) aaa‑aGACCGTTTCACGGTACCAAAAACACAGGCGGGAACAAATCGGGGCATTCATCTTATTAAGaagactggccccctgactctccagacaaccaatatcacttaaataagtgctagtcttaattctagtttttagagtagtccttgga < 2:657773‑M2/149‑86 (MQ=255) a‑aGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagg < 2:394499‑M2/149‑88 (MQ=255) gACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagattttagactagtcattggagaac > 1:421450‑M2/1‑60 (MQ=255) cttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGcagaac < 1:122521‑M2/98‑1 (MQ=255) cttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGcagaac < 1:684958‑M2/98‑1 (MQ=255) cGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacaga < 1:29189‑M2/149‑93 (MQ=255) cGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacaga < 1:272546‑M2/149‑93 (MQ=255) tttCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggggaacagctg < 1:3935‑M2/149‑95 (MQ=255) tttcttgtactaaACATACATGCCAGAACCAACCGGGTCATTCATCTTATTAAGtagcctggccccgtgaatctccacacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatga > 2:397592‑M2/7‑54 (MQ=255) ttCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatga > 1:8919‑M2/1‑54 (MQ=255) taatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGcagaacagaa > 1:569214‑M2/48‑149 (MQ=255) atgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATAATTGATGTTCACTTCAGAGAGAATGGCAGAACAGaaaa > 2:432196‑M2/46‑149 (MQ=255) ggTAACAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaacactagtttttagactagtcattggagaacagatgattgat > 1:430284‑M2/1‑49 (MQ=255) ggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACa > 1:356587‑M2/43‑149 (MQ=255) aaaaaCACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctta > 2:690231‑M2/1‑43 (MQ=255) aaaaaCACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctta < 1:511553‑M2/149‑107 (MQ=255) aaaaaCACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtaaactggccccccgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctta > 2:25678‑M2/1‑43 (MQ=255) aaaaCACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaataacacttaaataagtgatagtcttaataatagtttttagactagtcattggaaaaacgatagtggatgtcttgg < 1:138647‑M2/149‑108 (MQ=255) tgataccagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCCCCGGAGACAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTCAAGAGAGTATGGCTGAACAGAAAAACAAAAACGc > 2:560781‑M2/36‑149 (MQ=255) tgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGc > 2:293996‑M2/36‑149 (MQ=255) tgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGc < 1:46299‑M2/114‑1 (MQ=255) tgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTAAGGCAGAAAATAAAAACAAAAATGc > 1:377991‑M2/36‑149 (MQ=255) ataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCAc > 2:460822‑M2/34‑149 (MQ=255) acagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTAATGTTCTCTTCAGAGAGCATGGCAGAACAGAAAAACAAAAAAGCACCtt > 1:368091‑M2/31‑149 (MQ=255) gAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacg > 2:779069‑M2/1‑29 (MQ=255) ggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCaa > 2:510964‑M2/21‑149 (MQ=255) ggaaatataggggaaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAGGTGCATTTTTGTTTttctg < 2:667370‑M2/129‑3 (MQ=255) aatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCt > 1:637041‑M2/18‑149 (MQ=255) tataggggcaaatacATTAAGCCAGCAATCGACGCTCTCAGGAGTCAGAAGACAAAAACGAGACATAACAAAGAGCATATCATTGATGTTCACTTCAGAGCGGAGGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCGGa > 2:487924‑M2/16‑149 (MQ=255) aggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGGAAAGAGCACACCATTGATGTTCACTTCAGAGAGTATGGCAGAACTGAAAAACAAAAATGCCCCTTGGTTTTTCAACCTGAGgt > 1:16171‑M2/13‑149 (MQ=255) caaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAAAAAAAAAAAAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAg < 2:593015‑M2/142‑1 (MQ=255) aaagccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACAGTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGc < 1:318126‑M2/143‑1 (MQ=255) aatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCg > 1:503999‑M2/6‑149 (MQ=255) atccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCga < 1:460822‑M2/145‑1 (MQ=255) tccATTAAGCCAGCAATCGACGCCCACCGGAGTCAGATGACATTAACGAGACTGAGCAACAAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAAAGCACCTTGGTTTTTCAACCTGAAGTGTCAGCgag > 2:672316‑M2/4‑149 (MQ=255) ccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCgaga < 1:89872‑M2/147‑1 (MQ=255) ccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCgaga < 1:531438‑M2/147‑1 (MQ=255) ccATTAAGCCAGCAATCGACGCGCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCgaga < 1:322384‑M2/147‑1 (MQ=255) ttaAGgagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaa > 1:69667‑M2/1‑5 (MQ=255) | GTTCGCCCTGGTGAGCTGTGTGCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAA‑AGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGAGAGTA > NC_000913/1652112‑1652402 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |