BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,978,503	Δ776 bp		insB1–insA	insB1, insA

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1978503	1979278	776	165 [0]	[0] 167	insB1–insA	insB1,insA

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1978502	0 (0.000)	157 (0.920)	103/276	0.4	100%	intergenic (‑305/+16)	flhD/insB1	flagellar class II regulon transcriptional activator, with FlhC/IS1 transposase B
*	?	NC_000913	1979279 =	0 (0.000)	157 (0.920)	103/276	0.4	100%	intergenic (‑64/‑474)	insA/uspC	IS1 repressor TnpA/universal stress protein

Only 100 of 165 total aligned reads displayed.

ATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCA  >  NC_000913/1978359‑1978647

aTGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataa                                                                                                                                              <  1:1258200‑M1/149‑6 (MQ=255)

          acacTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttt                                                                                                                                    >  1:1752262‑M1/1‑134 (MQ=255)

              ttctctaAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGCGGGGGGCCGCGATTTTCAATAATGCGTGACGCAGATCACCCCAAACACTCAATTCCTTAACATAACCGtataagccacacttctgtt                                                                                                                                >  2:199501‑M1/4‑130 (MQ=255)

              ttATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatccttttgtt                                                                                                                                >  1:667498‑M1/1‑130 (MQ=255)

              ttATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgtt                                                                                                                                >  1:1448351‑M1/1‑130 (MQ=255)

                aTCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatactcttgtttt                                                                                                                              >  1:1188430‑M1/1‑128 (MQ=255)

                 tCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGGGATGCAGATCACACAAAACACTCAATTACTTAACATAAGTGtgtaagtaatacttttgtgttg                                                                                                                             >  1:254543‑M1/1‑127 (MQ=255)

                 gctAAGATTTTTCCGAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttg                                                                                                                             <  2:73440‑M1/148‑23 (MQ=255)

                  cTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgg                                                                                                                            <  1:941362‑M1/149‑24 (MQ=255)

                   tAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttggg                                                                                                                           >  1:2680675‑M1/1‑125 (MQ=255)

                     aGATTTTTCCTAAATCGACGCAACTGTACCCGTCACTACACGCACATACAACGCAGGGGGGCTGCGACTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAATATAAATGgataagtcatacttttgttttgggtg                                                                                                                         >  1:1846261‑M1/1‑123 (MQ=255)

                          tttCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtattt                                                                                                                    <  1:1240677‑M1/149‑32 (MQ=255)

                           ttCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCACTAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttc                                                                                                                   >  1:1831869‑M1/1‑117 (MQ=255)

                             ccTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaa                                                                                                                 >  2:2968354‑M1/1‑115 (MQ=255)

                              cTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGTGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaat                                                                                                                <  2:1847084‑M1/149‑36 (MQ=255)

                              cTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatatttttgttttgggtgtatttcaat                                                                                                                <  1:1665693‑M1/149‑36 (MQ=255)

                              cTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaat                                                                                                                <  2:1725888‑M1/149‑36 (MQ=255)

                              cTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTCAACATAAATGtataagtcatacttttgttttgggtgtatttcaat                                                                                                                <  2:1850789‑M1/149‑36 (MQ=255)

                               tAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgctttgggtgtatttcaatc                                                                                                               >  1:1943282‑M1/1‑113 (MQ=255)

                               tAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATCTTCCATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataaatcatactcttgttttgggtgtcttccaatc                                                                                                               >  2:1225136‑M1/1‑113 (MQ=255)

                                  aTCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACGTAAATGtataggtcacacttttgttttgggtgtatttcaatcggt                                                                                                            >  1:1339027‑M1/1‑110 (MQ=255)

                                  aTCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgt                                                                                                            <  2:1773344‑M1/149‑40 (MQ=255)

                                        gCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaa                                                                                                      <  2:1489111‑M1/149‑46 (MQ=255)

                                        gCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaa                                                                                                      <  1:1099560‑M1/149‑46 (MQ=255)

                                          aaCTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttccgctggaagttcaatctgttaaaaagt                                                                                                    >  2:766212‑M1/1‑102 (MQ=255)

                                          aaCTGTACTCGTCACTACACGCACATACAACGGAGCTCGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagt                                                                                                    >  1:2988964‑M1/1‑102 (MQ=255)

                                              gcgcccgtcccGACACGCACCTCCAATGGAGGGGGGCTGCGATTTTCACTAATGCGTGATGCAGATCACACAAAACACTCCATTACTGAACATAAATGtataattcatacttttgttttgggtgtatttcaatctgttaaaaagttttt                                                                                                <  1:334491‑M1/144‑52 (MQ=255)

                                              gTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagttttt                                                                                                >  2:79613‑M1/1‑98 (MQ=255)

                                               tACTCGTCACTTCACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttc                                                                                               <  1:89969‑M1/149‑53 (MQ=255)

                                               tACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcactctgttaaagagtttttc                                                                                               >  2:2361101‑M1/1‑97 (MQ=255)

                                               tACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttc                                                                                               <  2:2853855‑M1/149‑53 (MQ=255)

                                                  tCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgct                                                                                            >  1:2316288‑M1/1‑94 (MQ=255)

                                                     tCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacg                                                                                         >  2:417351‑M1/1‑91 (MQ=255)

                                                        cTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgcta                                                                                      >  2:2506084‑M1/1‑88 (MQ=255)

                                                            acGCACATACAACGGAGGGGTGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttaactcttttaaaaagtttttcgctacgttcgcaa                                                                                  >  2:571969‑M1/1‑84 (MQ=255)

                                                            acGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaa                                                                                  <  2:2108951‑M1/149‑66 (MQ=255)

                                                            acGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaa                                                                                  <  1:841420‑M1/149‑66 (MQ=255)

                                                            acGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaa                                                                                  <  2:1742348‑M1/149‑66 (MQ=255)

                                                              gCACATACAACGGAGGGGGGCTGCAATTTTCAATCATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagc                                                                                >  1:1532916‑M1/1‑82 (MQ=255)

                                                               cacaTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATGAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagca                                                                               <  2:1115448‑M1/149‑69 (MQ=255)

                                                                   tccaaCGGAGGGGGGCGGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaa                                                                           <  2:1659310‑M1/147‑73 (MQ=255)

                                                                   tcaaactgAGGCAGGCTTCGATTTTCAATAATTCGTGATGCACATCACACAAAACACTCAATTACTTAACATCAATGtataagtcatacttttgttttgggtctatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaa                                                                           <  2:2742001‑M1/146‑73 (MQ=255)

                                                                    aCAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaat                                                                          >  1:653348‑M1/1‑76 (MQ=255)

                                                                      aaCGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatga                                                                        >  2:392046‑M1/1‑74 (MQ=255)

                                                                      aaCGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatga                                                                        <  2:774149‑M1/149‑76 (MQ=255)

                                                                      aaCGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatga                                                                        >  1:2628018‑M1/1‑74 (MQ=255)

                                                                        cGGAGGGGTGCTGCTGTTTTCAATAATGGTTTGTGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaa                                                                      <  2:1451462‑M1/149‑78 (MQ=255)

                                                                          gAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaaca                                                                    >  2:729782‑M1/1‑70 (MQ=255)

                                                                           aGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTGAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacag                                                                   >  1:1348236‑M1/1‑69 (MQ=255)

                                                                               gggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaggtttttcgctacgctagcaagcaaaaatgtaccaggaat                                                               >  1:1304403‑M1/1‑65 (MQ=255)

                                                                               gggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaat                                                               >  2:950688‑M1/1‑65 (MQ=255)

                                                                               gggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaat                                                               <  1:1661806‑M1/149‑85 (MQ=255)

                                                                                 gCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataa                                                             >  1:1877154‑M1/1‑63 (MQ=255)

                                                                                  cTGCGATTTTCAATAATGCGTGATGCAGATCCCACAAACCACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataat                                                            <  2:270664‑M1/149‑88 (MQ=255)

                                                                                  cTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataaggcatacttttgttttgggtgtatttaaatctgttaaaaagtttttcgcttcgctagcaaacaaaaatgaaaaaggagtaat                                                            >  2:1611237‑M1/1‑62 (MQ=255)

                                                                                   tgatattttCAATAATGAGTGAAGAAGATCACATCAAACCCTCAAGTACTTAAGATAAATGtataagtcatacttttgttttggggttattaaaaactgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatc                                                           <  2:2459851‑M1/145‑89 (MQ=255)

                                                                                   tGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTTCTTAACACAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatc                                                           <  1:2236989‑M1/149‑89 (MQ=255)

                                                                                   tGCCATTTTACATAATGCGTGATGCATATCACACAAATCACTCAATTACCTAACATAAATGtataagtgatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaagaataatc                                                           <  2:2619871‑M1/149‑89 (MQ=255)

                                                                                      gATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaa                                                        <  1:237153‑M1/149‑92 (MQ=255)

                                                                                        ttttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacagcaataatcgaaat                                                      >  1:555167‑M1/1‑56 (MQ=255)

                                                                                         tttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatg                                                     >  2:2179462‑M1/1‑55 (MQ=255)

                                                                                          ttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtaatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgg                                                    >  1:1601188‑M1/1‑54 (MQ=255)

                                                                                            cAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatggga                                                  >  1:2593732‑M1/1‑52 (MQ=255)

                                                                                            cAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaacgaaacaggaataatcgaaatggga                                                  <  2:2554237‑M1/149‑98 (MQ=255)

                                                                                                aatGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgatacaggaataatcgaaatgggatgtt                                              <  1:1517850‑M1/149‑102 (MQ=255)

                                                                                                   gCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctggcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcg                                           >  1:190748‑M1/1‑45 (MQ=255)

                                                                                                    cgtgtggcagatcACACAAAACACTCTATTACTTAACATAAATGtataagtcattcttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataagcgaaatgggatgttgcgc                                          <  2:1188430‑M1/143‑106 (MQ=255)

                                                                                                     gTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgca                                         <  1:920000‑M1/149‑107 (MQ=255)

                                                                                                       gttgcACATCACATAAAACACTCAATTACTTACCATAAATGtattagtcataattttgttttgtgtctttttcaatccgttaaaacgtttgtcgttacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcaca                                       <  2:12664‑M1/147‑109 (MQ=255)

                                                                                                       gaaggagatcaCACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcaca                                       >  2:1879987‑M1/6‑41 (MQ=255)

                                                                                                             gATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaa                                 <  2:2144141‑M1/149‑115 (MQ=255)

                                                                                                             gATAACACAAATCTCTCAATTACTTAACATCAATGtataagtcatacttttgttttgggtggatttcaatctgttaaaaagtttttcgcgacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaa                                 <  2:2490395‑M1/149‑115 (MQ=255)

                                                                                                              gtcACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttgaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaa                                <  2:2257920‑M1/148‑116 (MQ=255)

                                                                                                                  cacaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataac                            >  2:1528921‑M1/1‑30 (MQ=255)

                                                                                                                  caaaaaacccTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataac                            <  1:766212‑M1/146‑120 (MQ=255)

                                                                                                                   acaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataact                           >  1:2614621‑M1/1‑29 (MQ=255)

                                                                                                                   acaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataact                           <  1:729782‑M1/149‑121 (MQ=255)

                                                                                                                   acaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgcatagggtggatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataact                           <  1:850837‑M1/149‑121 (MQ=255)

                                                                                                                    caAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgc                                          >  2:103371‑M1/1‑28 (MQ=255)

                                                                                                                    caAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgc                                          <  1:103371‑M1/133‑106 (MQ=255)

                                                                                                                     aaaaCACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactca                         >  1:1635857‑M1/1‑27 (MQ=255)

                                                                                                                          acTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcagaataactcaccgta                    >  1:44035‑M1/1‑22 (MQ=255)

                                                                                                                          acTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgta                    >  2:2181491‑M1/1‑22 (MQ=255)

                                                                                                                           cTCAATTACTTAACATAAATGtattagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaa                   <  2:1947234‑M1/149‑129 (MQ=255)

                                                                                                                           cTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaa                   >  2:354569‑M1/1‑21 (MQ=255)

                                                                                                                            tCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaa                  <  2:2368034‑M1/149‑130 (MQ=255)

                                                                                                                            tCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaaaaggaataatcgaaatgggatgttgggcacagtcaaaataacgcaccgtaac                  >  1:2341427‑M1/1‑20 (MQ=255)

                                                                                                                              aaTTACTTAACATATATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaata                <  2:2045290‑M1/149‑132 (MQ=255)

                                                                                                                              aaTTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaata                >  2:2123824‑M1/1‑18 (MQ=255)

                                                                                                                              aaTTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcacc                       >  1:35994‑M1/1‑18 (MQ=255)

                                                                                                                              aaTTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaataggattttgcgcacagttaaaataactcaccgtaaata                >  1:2058024‑M1/1‑18 (MQ=255)

                                                                                                                                   cTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataatcat           <  2:1282665‑M1/149‑137 (MQ=255)

                                                                                                                                    ttAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataatcatc          >  1:2929891‑M1/1‑12 (MQ=255)

                                                                                                                                     tAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataatcatct         >  1:2883032‑M1/1‑11 (MQ=255)

                                                                                                                                         aTAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataatcatctgcta     <  2:2723491‑M1/149‑143 (MQ=255)

                                                                                                                                         aTAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataatcatctgcta     >  2:254502‑M1/1‑7 (MQ=255)

                                                                                                                                         aTAAATGtataagtcatacttttgttttgcgtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgtggcgcacagtcaaaagaactcaccggaaataagcatctgcta     >  1:2130319‑M1/1‑7 (MQ=255)

                                                                                                                                          tAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataatcatctgctat    <  1:2506084‑M1/149‑144 (MQ=255)

                                                                                                                                           aaaTGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataatcatctgctata   <  1:158056‑M1/149‑145 (MQ=255)

                                                                                                                                            aaTGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataatcatctgctataa  <  2:164728‑M1/149‑146 (MQ=255)

ATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCA  >  NC_000913/1978359‑1978647

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`