New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12078057 (0.100)50 (0.830) 42/250 0.4 88.3% coding (305/630 nt) stfP e14 prophage, uncharacterized protein
?NC_000913 = 1209602 7 (0.120)pseudogene (18/501 nt) stfE pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

AATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAA  >  NC_000913/1209460‑1209743
                                                                                                                                              |                                                                                                                                             
gagcAGGCAATTTAGTGGGCGGATAAGCCTTTGGCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCCTTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCagag                                                                                                                                               <  1:875663/140‑1 (MQ=255)
aagcAGGCAATGTGATTGGTGGATAAGCGTTTGCCAGGTCCGGGGAGTCTGCAGAAGAAAAAGCGGCACCATGGCATTGCAGCCAGGCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCagag                                                                                                                                               <  2:1045202/140‑1 (MQ=255)
 aTCAGGCAATTTAGTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGc                                                                                                                                              >  2:688278‑M2/1‑142 (MQ=255)
  tCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGcc                                                                                                                                             <  2:430961‑M2/143‑3 (MQ=255)
    aGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGcctt                                                                                                                                           <  1:438152‑M2/143‑5 (MQ=255)
    aGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGcctt                                                                                                                                           <  1:435956‑M2/143‑5 (MQ=255)
      gCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttct                                                                                                                                         <  1:510187‑M2/143‑7 (MQ=255)
       ctatttatttgtCGGATAAGCCTTGGCCAGTTCCTGTTATGCTTCAGCAGAAAAAGCGGCACCATTGCATTTCTGCCAGCCGGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctc                                                                                                                                        >  2:631465‑M2/3‑136 (MQ=255)
       cagtgtatttgtgagAGTAGCCTTTGCCACGTCCGGGTATTCATCAGCAGAAGCAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGCCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctc                                                                                                                                        >  2:647153‑M2/6‑136 (MQ=255)
       cAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAACAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctc                                                                                                                                        >  2:711875‑M2/1‑136 (MQ=255)
       cAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctc                                                                                                                                        >  1:1000578‑M2/1‑136 (MQ=255)
         atttatttGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGAAACCAACAGGTAATGCAGAGccttctccc                                                                                                                                      <  1:1032786‑M2/143‑10 (MQ=255)
           ttatttGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACTCGAAAAGGTAATGCAGAGccctctcccaa                                                                                                                                    <  2:545384‑M2/143‑12 (MQ=255)
           ttatttGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGCGACACCAACAGGTAATGCAGAGccttctcccaa                                                                                                                                    <  2:393971‑M2/143‑12 (MQ=255)
           ttatttGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGACACCATTGCTTTTCCGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAACGCAGAGcctgctcccaa                                                                                                                                    <  1:925936‑M2/143‑12 (MQ=255)
            tatttGCCGGGTAAGCCTGTGCCAGTGCCGGGTGTGCCCAAGCCGAGAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaa                                                                                                                                   >  2:245049‑M2/1‑131 (MQ=255)
            tagttGTCGGATAAGCCTCTGCCAGTTCCGGGTATGCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCaaa                                                                                                                                   <  2:747002/140‑1 (MQ=255)
                 gccgtaccagcctgtgcCCGCTCCGGGTATCTTTCAGCGGAAGAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaag                                                                                                                              >  2:1031102‑M2/9‑126 (MQ=255)
                 gTCGGATAAGCCCTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaag                                                                                                                              >  1:819144‑M2/1‑126 (MQ=255)
                 ctcggggaggcctttgccgGTTCCGGGCATCCTGCAGCAGAGAAAGCGGCACCAGTGCATTTCGGCCAGCCTGGTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaag                                                                                                                              >  2:665520‑M2/10‑126 (MQ=255)
                         aGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcga                                                                                                                      >  2:275082‑M2/1‑118 (MQ=255)
                           ccTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACCCCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTCTAtcaca                                                                                                                    >  2:804542/1‑139 (MQ=255)
                             tttGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGaaagt                                                                                                                  >  1:357530/1‑141 (MQ=255)
                                gCCAGTGGCGGGTATTCTTCAGCAGAATGTGGGGCACCATTGCGTTTGAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATgaa                                                                                                               <  2:1090308/143‑1 (MQ=255)
                                    gTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaacaaaggttttcgagagccgtttcc                                                                                                           <  1:1101392‑M2/143‑37 (MQ=255)
                                      tCCTGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATGTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcac                                                                                                         >  1:16162‑M2/1‑105 (MQ=255)
                                      tCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcac                                                                                                         <  1:586881‑M2/143‑39 (MQ=255)
                                        cGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATCTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccccctcccacaccaaggctctcgcgagccgttcgcacag                                                                                                       <  2:848161‑M2/143‑41 (MQ=255)
                                          ggcactcttccgcacAAAAAGCGTCACCACTGCATCTCAGCCAGCCTGTTGGCGGAGTGGCTCAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtg                                                                                                     >  2:117398‑M2/6‑101 (MQ=255)
                                          ggTATTCCTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtg                                                                                                     >  1:643365‑M2/1‑101 (MQ=255)
                                           gTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggctttcgagagccgtttgcacaatgc                                                                                                    <  2:892545‑M2/143‑44 (MQ=255)
                                            tATTCTTCAGCAGAGAGAGCGGCACCATTGCATTTGAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCATCAGGTAATGCAGAGccttctcccaaaccaaggttttcgagggccgtttgcacagtgcc                                                                                                   >  2:1018986‑M2/1‑99 (MQ=255)
                                            tATTCGTCAGCAGACATAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccataccaaggttttcgagagccgtttgcacagtgcc                                                                                                   >  2:552222‑M2/1‑99 (MQ=255)
                                              ttcttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGAAGAGccagctcccaaaccaaggtattcgggagccgtgtgcacagtgccat                                                                                                 <  2:190814‑M2/143‑47 (MQ=255)
                                                 ttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTGATGAACATGAAGAAATAACAAGCAAATg                                                                                              >  2:1004791/1‑143 (MQ=255)
                                                    cgcaggAAAAGTGGCCCCATTGCTTTTCAGCCAGCCTGTGGGCAGAGTGGCTGAAGGCCACGGAACCGGAGCACCAACAGGTAATTCAGAGccttctcccaaaccaatgttttcgagagccgtttgcacagtgccatccgatt                                                                                           >  2:1046363‑M2/2‑91 (MQ=255)
                                                       agAAAAAGCGGCACCATTGCCTTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccgaggttttcgagagccgtttgcacagtgccatccgatttga                                                                                        >  2:256533‑M2/1‑88 (MQ=255)
                                                           aaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatc                                                                                    >  1:430961‑M2/1‑84 (MQ=255)
                                                           aaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatc                                                                                    <  1:28932‑M2/143‑60 (MQ=255)
                                                            aaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcg                                                                                   >  2:438152‑M2/1‑83 (MQ=255)
                                                              gCGGCACCATGGCATTGCGGCCAGCCTGTTGGCGGAGGGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgcc                                                                                 >  2:867011‑M2/1‑81 (MQ=255)
                                                                ggCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaa                                                                               <  1:1028698‑M2/143‑65 (MQ=255)
                                                                  cACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgattgcacagtgccatccgatttgatatcgccaacc                                                                             <  2:801417‑M2/143‑67 (MQ=255)
                                                                     cattgcattgGAGCCAGCCTGTTGGGGGTGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCACAGccttctcccaaaccaaggtttttgagagccgtttgcacagtgccatccgatttgatatcgccaaacgga                                                                          >  2:427430‑M2/1‑74 (MQ=255)
                                                                      aTTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaccggat                                                                         <  1:27640‑M2/143‑71 (MQ=255)
                                                                      aTTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCa                                                                         <  2:965277/143‑1 (MQ=255)
                                                                       ttGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAGTGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacaatgcgatccgattggatatcgccaaacggatt                                                                        <  1:22553‑M2/143‑72 (MQ=255)
                                                                           aTTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttg                                                                    <  1:743600‑M2/143‑76 (MQ=255)
                                                                           aTTGCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttg                                                                    >  2:338769‑M2/1‑68 (MQ=255)
                                                                            tttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcgtgc                                                                   <  1:237449‑M2/143‑77 (MQ=255)
                                                                            tttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaaaggattcttgc                                                                   <  1:239611‑M2/143‑77 (MQ=255)
                                                                                agccagccTGTTGGCGGAGTGGCTGAAGGCAACGGAAGCGGGACACCAACTGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTTCTGCTTTTACCAGGGGGATTTa                                                               >  1:502586/1‑143 (MQ=255)
                                                                                   cagctTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaa                                                            >  1:21682‑M2/1‑60 (MQ=255)
                                                                                   cagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgctatccccagacggattcttgcggcgtaa                                                            <  1:465095‑M2/143‑84 (MQ=255)
                                                                                      ccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccggttgcacagtgccatccgctttgatatcgccaaaaggattcatgcggcttaacag                                                         <  2:332752‑M2/143‑87 (MQ=255)
                                                                                        tGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagca                                                       <  1:240733‑M2/143‑89 (MQ=255)
                                                                                                    ggCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtg                                           >  2:427423‑M2/1‑43 (MQ=255)
                                                                                                     gCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatcgcgccaaacggatacttgccgcttaaacgcagcgcgcgccgtgc                                          <  2:335515‑M2/143‑102 (MQ=255)
                                                                                                     gCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagcgc                                          <  2:68936‑M2/143‑102 (MQ=255)
                                                                                                        gAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccaatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggt                                       <  2:321163‑M2/143‑105 (MQ=255)
                                                                                                            gCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcgtaacagcagcgcgcgaagtgcggtaagg                                   <  1:615537‑M2/143‑109 (MQ=255)
                                                                                                            gCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgacatcgccaacaggattcctgcggctgaacacccgagcgcacagtgccgtaagt                                   <  2:293628‑M2/143‑109 (MQ=255)
                                                                                                             ccACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatcccatttgatatcgccaaacggattcttgcggcttaacaccaccgcgcgaagtgcgctaagtc                                  <  2:208951‑M2/143‑110 (MQ=255)
                                                                                                              ctcggATCCTGGACAACATCAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgctcagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaa                                 >  2:226848‑M2/3‑33 (MQ=255)
                                                                                                              cccagaccagcgatacctacaggTGATGCAGAGccttctcccaaacccaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaagcggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaa                                 >  2:615‑M2/12‑33 (MQ=255)
                                                                                                               aCGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggtatacgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaac                                >  1:991648‑M2/1‑32 (MQ=255)
                                                                                                                 ggAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaatgttttcgagagccgtttgcacagtgccatccgatttgagatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactg                              >  2:457076‑M2/1‑30 (MQ=255)
                                                                                                                       gggACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGCTTTAACATGCTTATTTGCCATGTCCGCGTATcactgactgacc                        >  1:316094/1‑133 (MQ=255)
                                                                                                                        ggACACCAACAGGTATTGCAGCGccttctcccaaaccaaggttttcgagagccgtgtgcacattgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgc                       >  1:594366‑M2/1‑23 (MQ=255)
                                                                                                                              cAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgcccc                 >  1:644646‑M2/1‑17 (MQ=255)
                                                                                                                                     tACTGCAGACccttcccccaaaccagggtgttcgagagccgtttgcacggtgccctacgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgagaagtgcggtaagtaactggtcgtgccgccccttctcca          >  2:22553‑M2/1‑10 (MQ=255)
                                                                                                                                        tGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcataacagcagcgcgcgaagtgcggtaagtaactggtcgtgcctgcccttcgccagga       <  1:1041708‑M2/143‑137 (MQ=255)
                                                                                                                                            gagccttctcccaaacccatcttttcgagggccgtttgcacagtgccatccgatttgatatcgccaaacggattcgtgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggc   >  1:230802‑M2/1‑3 (MQ=255)
                                                                                                                                             agccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccagacggcttcttgcggcctcacagcagcgcgcgaagtgaggtacgtaactggtcgtgccgcccgttgtccaggacgaca  <  2:269338‑M2/143‑142 (MQ=255)
                                                                                                                                              |                                                                                                                                             
AATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAA  >  NC_000913/1209460‑1209743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.