| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 273955 = | NA (NA) | 43 (1.110) | 35/284 | 0.1 | 95.6% | intergenic (+1/+146) | ykfC/insH1 | CP4‑6 prophage, conserved protein,Phage or Prophage Related/IS5 transposase and trans‑activator |
| ? | NC_000913 | 618513 = | 2 (0.050) | coding (260/1134 nt) | fepE | regulator of length of O‑antigen component of lipopolysaccharide chains | |||||
AAAAAACGGTCATGGCGGTCGTTTTTGCGTTTGCCTGCGCAGGCTTGCTGATCTCTTTCATCCTGCCGCAAAAATGGACCAGCGCGGCGGTTGTCACGCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCAAGAAGTTTCAGTCGGTTAGCTTGCTGGAAGAGTACCTGCGTTCATCACCTTATGTGATGGACCAATTAAAAGAGGCG > NC_000913/618372‑618655 | tgggctcactccttaaatgtcgaagacacggtctaaagaggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatcactgactcagccgagaagaatttccccgcttattcgcaccttccCt < 1:52259‑M2/2‑1 (MQ=255) ggcataaccacttaaatggcgaagacacggtctaaacaggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa < 2:662925‑M2/3‑1 (MQ=255) aaaaaCGGTCATGGCGGTCGTTTTTGCGTTTGCCTGCGCAGGCTTGCTGATCTCTTTCATCCTGCCGCAAAAATGGACCAGCGCGGCGGTTGTCACCCCTCCCGAACCCGTTCAGTGGCCAGCGCTGGAGCAATCATTCAcca > 1:133728/1‑141 (MQ=255) aaaaCGGTCATGGCGGTCGTTTTTGCGTTTGCCTGCGCAGGCTTGCTGATCTCTTTCATCCTGCCGCAAAAATGGACCAGCGCGGCGGTTGTCACGCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTaa < 1:282660/143‑1 (MQ=255) aTGGCGGTCGTTTTTGCGTTTGCCTGCGCAGGCTTGCTGATCTCTTTCATCCTGCCGCAAAAATGGACCAGCGCGGCGGTTGTCACGCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgc < 1:372948‑M2/143‑9 (MQ=255) tGGCGGTCGTTTTTGCGTTTGCCTGCGCAGGCTTGCTGATCTCTTTCATCCTGCCGCAAAAATGGACCAGCGCGGCGGTTGTCACGCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcg > 1:440850‑M2/1‑134 (MQ=255) aaggaacgggcgaaatgggcgggtgcgaggcatgtacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagcagcatttcaccgtttattcgcaccttccCTAAGCTTCGTGTGctggatctgg < 2:461683‑M2/24‑1 (MQ=255) aagaaacggtctaaataggctgcttcaaggcatttacgggagaaacaatcggctcaaacatgaagaaatgaaatgactgcgtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCTTCGTGTGctggatctgg < 2:271561‑M2/24‑1 (MQ=255) aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgctaattcgcaccgtccACAAGCTTCGTGTGcgggatctgg > 1:475620‑M2/120‑143 (MQ=255) aagaaacggtcgaaataggctggttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgggtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCTTCGTGTGctggatctgg < 1:119356‑M2/24‑1 (MQ=255) gCGTTTGCCTGCGCAGGCTTGCTGATCTCTTTCATCCTGCCGCAAAAATGGACCAGCGCGGCGGTTATCACGCCTCCAGAACATGTTCAGTGGCAAGAGTAGGAGAAATAATTCACTAAGgcaggtgcgaacaagtccctaat < 2:300402‑M2/143‑24 (MQ=255) gTTTGCCTGCGCAGGCTTGCTGATCTCTTTCATCCTGCCGCAAAAATGGACCAGCGCGGCGGTTGTCACGCCTCCAGAACCTGTTCCGTGGCAAGAGTTGGCGCCTTCATTCACTAAGgaaggtgcgaacaagtacctgatat < 2:162188‑M2/143‑26 (MQ=255) ttGCCTGCGCAGGCTTGCTGATCTCTTTCATCCTGCCGCAAAAATGGACCAGCGCGGCGGTTGTCACGCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatga > 1:217099‑M2/1‑116 (MQ=255) ctccgccgcgggcttgCTGAGCTCTTGCATCCTGCCGCAAAAATGGACCAGCGCGGCGGTTGTCACCCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATGCACTAAGgaaggtgcgaacaagtccctgatatgag > 2:528704‑M2/7‑115 (MQ=255) aataggctgattcaaggcatttacgggagaaaaaaacggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGatatcaaactcga > 1:540683‑M2/107‑138 (MQ=255) ataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGAt < 2:333928‑M2/38‑1 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttacCTAAGCGTAGTGTGCTGGGTCTGGCTACCCAAAGCGAtcgca > 1:637263‑M2/102‑141 (MQ=255) aGGCTTTCTGATCTCCTTCATCCCGCCGCAAACATGGACCAGCGCGGCGGTTGTCACGCCTCCAGAACCGGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgttt > 1:363446‑M2/1‑106 (MQ=255) aGGCTTGCTGATCTCTTTCATCCTGCCGCAAAAATGGACCAGCGCGGCGGTTGTCACGCCTCCAGAACCTGTTCAGTGGCGAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagctcatgttt < 2:559046‑M2/143‑38 (MQ=255) ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgcgtcggccgagaaggatttccccgcttattcgcaccttccCTACGCTTCGTGTGCTGGATCTGGATATCAGAATTGATcgtcc > 2:77630‑M2/101‑141 (MQ=255) gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcggccgagaagaatttccccgcttattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAg > 2:438761‑M2/99‑143 (MQ=255) ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGaa < 2:436844‑M2/47‑1 (MQ=255) tGCTGATCTCTTTCATCCTGCCGCAAAAATGGAGCAGCGCGGCGGTTATCACGCCTCCAGAACCTGTTCAGTGGCAAGAGGTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcat > 2:318813‑M2/1‑101 (MQ=255) tGCTGATCTCTTTCATCCTGCCGCAAAAATGGACCAGCGCGGCGGTTGTCACGCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcat < 1:674831‑M2/143‑43 (MQ=255) aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgacatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTACGCTTCGTGTGCTGGATCTGGATATCAAAACTGATCGCACAGAAGcaa > 1:127789‑M2/93‑142 (MQ=255) aTCTCTTTCATCCTGCCGCAAAAATGGACCAGCGCGGCGGTTGTCACGCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagaccatgtttgtcatctgga < 1:232585‑M2/143‑48 (MQ=255) tctcTTTCATCCTGCCGAAAAAAGGGACCAGCGCGGCGGTTGTCACGCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag > 1:525655‑M2/1‑95 (MQ=255) atttacgggagaaaaaaacggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTaa < 2:411835‑M2/55‑1 (MQ=255) tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAAc > 2:581112‑M2/88‑143 (MQ=255) tttCATCCTGCCGCAAAAATGGACCAGCGCGGCGGTTGTCACGCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat > 1:133287‑M2/1‑91 (MQ=255) ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAAcc < 2:309814‑M2/57‑1 (MQ=255) cgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCTTCGTGTGAACAGCCTTAAGAGCAAAATTGATCGTACAGAAGCATTTAACCTGt > 1:652386‑M2/84‑143 (MQ=255) gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccATAAGCTTCGTGTGATGGATCTGGATATCAAACTTGAACGTGTAGAAGCAGTTAACATGtt > 1:538968‑M2/83‑143 (MQ=255) tGCCGCAAAAATGGCCCCTCGCGGCGGTTGTCACGCCTCCAGAACCTGTCCAGCGGAAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg > 2:59680‑M2/1‑83 (MQ=255) gCCGCAAAAATGGACCAGCGCGGCGGTTGTCACGCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 2:646454‑M2/1‑82 (MQ=255) aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCaa < 1:607890‑M2/67‑1 (MQ=255) aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCaa < 2:24594‑M2/67‑1 (MQ=255) aatgggctgaaagctgaagagatggactgactgagtcagccgagaagaatttccccggttattcgcacctaccCTAAGCTTCGGGGGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATGTAACCTGTGTATCaagaa < 1:25810‑M2/70‑1 (MQ=255) atcggctcaatcatgaagaaatgaaattactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCaagaag < 1:207409‑M2/71‑1 (MQ=255) atcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttactcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCaagaag < 2:28899‑M2/71‑1 (MQ=255) aaaaTGGACCAGGGCGGCGGTTGGCACGCCTCCAGAACCGGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaagaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatt > 1:642878‑M2/1‑76 (MQ=255) ggctcaaacatgaagaactgaaaggactgagtcagccgagaagactttccccgctgattcgcaccttcgCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCAAGAAGttt < 1:192420‑M2/74‑1 (MQ=255) aaTGGACCAGCGCGGCGGTTGTCACGCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat > 2:389181‑M2/1‑74 (MQ=255) aaTGGACCAGCGCGGCGGTTGTCACGCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgattgtcatctggagccatagaacagggttgctcat < 2:159105‑M2/143‑70 (MQ=255) aaTGGACCAGCGCGGCGGTTGTCACGCCTCCAGAACCTGTTCAGTGGCAAGAGGTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat < 2:62889‑M2/143‑70 (MQ=255) tGGACCAGCGCGGCGGTTGTCACGCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga > 2:428641‑M2/1‑72 (MQ=255) tGGACCAGCGCGGCGGTTGTCACGCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga > 2:372948‑M2/1‑72 (MQ=255) ctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCAAGAAGTTTCa < 1:281615‑M2/76‑1 (MQ=255) aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCACAATTGATCGTACAGAAGCATTTAACCGGGTTCTCCAGAAGTTGCAgtg > 1:438208‑M2/65‑142 (MQ=255) aCCAGCGCGGCGGTTGTCACGCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAGATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc > 1:605650‑M2/1‑69 (MQ=255) catgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCAAGAAGTTTCAGTCGGt < 2:229462‑M2/82‑1 (MQ=255) atgaagagatgaaatgactgagtcagccgagaagactttccccgcttattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCAAGAAGTTTCAGTCGGtt < 2:213919‑M2/83‑1 (MQ=255) gtgggttgTCACGCCTCCAGAACCTGTTGAGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt > 1:362426‑M2/4‑61 (MQ=255) cggTTGTCACGCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac < 1:441373‑M2/143‑85 (MQ=255) ttGTCACGCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt > 2:674831‑M2/1‑56 (MQ=255) atgactgggtgagcagaggaggatttccccgcttgttcgcaccttccGTAAGCGTCGTGTGCTGGATCTGGATATCAAAATTGATCGGACAGAAGCATTTAACCTGTTTATCAAGAAGTTTCAGTCGGTTAGCTTGCTGGAag < 1:430774‑M2/96‑1 (MQ=255) atgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCAAGAAGTTTCAGTCGGTTAGCTTGCTGGAag > 2:327756‑M2/48‑143 (MQ=255) aCGCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccg < 1:618831‑M2/143‑93 (MQ=255) tgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATCGCTCGTACAGAAGCATTTAACCTGTTTATCAAGAAGTCTCAgacgattcgcctgaggccaacgtac > 1:618254‑M2/43‑131 (MQ=255) tcagccgagaagaatttccccgcttattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCAAGAAGTTTCAGTCGGTTAGCTTGCTGGAAGAGTACCTGc > 2:9293‑M2/39‑143 (MQ=255) aGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagcgaa < 1:529041‑M2/143‑101 (MQ=255) aGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacgtcccttcgccgacagcgaa < 1:426011‑M2/143‑101 (MQ=255) agccgagaagaatttccccgcttattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCAAGAAGTTTCAGTCGGTTAGCTTGCTGGAAGAGTACCTGCGt < 1:152752‑M2/107‑1 (MQ=255) cTGTTTAGTGGCAAGAGTTGGAGAAATCATTCTCTAATgaaggtgcgaacaagtccctgacatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag > 1:654550‑M2/1‑38 (MQ=255) cTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgccatctggatccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag > 2:252549‑M2/1‑38 (MQ=255) agaagtatttccccgcgtattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCAAGAAGTTTCAGTCGGTTAGCTTGCTGGAAGAGTACCTGCGTtcatc < 2:88521‑M2/112‑1 (MQ=255) agaagaattgccccgcttattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCAAGAAGTTTCAGTCGGTTAGCTTGCTGGAAGAGTACCTGCGTtcatc < 1:94264‑M2/112‑1 (MQ=255) gaacagtttccccgcctattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACACAAGCATTTAACCTGTTTATCAAGAAGTTTCAGTCGGTTAGCTTGCTGGAAGAGTACCTGCGTtcatca < 1:136592‑M2/113‑1 (MQ=255) tagGGGCGAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagta > 1:315855‑M2/2‑33 (MQ=255) gaatttccccgcttattcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCAAGAAGTTCCATTCGGTTAGCTTGCTGGAAGAGTACCTGCGTTCATCACCt > 2:213451‑M2/28‑143 (MQ=255) aGTGGCAAGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaa < 2:277580‑M2/143‑112 (MQ=255) ttgccccgcttagtcgcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCAAGAAGTTTCAGTCGGTTAGCTTGCTGGAAGAGTACCTGCGTTCATCACCTTAt < 1:122125‑M2/119‑1 (MQ=255) ggCAAGGGTGGGAGAAAGCAGGCACGAAGgaaggtgcgaacaagtccctgatatgagagcatgtttgtaatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcg > 2:133728‑M2/1‑29 (MQ=255) aaGAGTTGGAGAAATCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccg < 1:516818‑M2/143‑118 (MQ=255) ggattattcgcaccttctCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACATGTTTATCAAGAAGTTTCAGTCGGTTAGCTTGCTGGAAGAGTACCTGCGTTCATCACCTTATGTGATg < 1:306573‑M2/125‑1 (MQ=255) gagaAATCATTCACTAAGgaaggtgcgaacaagtccctgagatgagatcatgtttgtcatctcgagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacca > 2:338732‑M2/1‑18 (MQ=255) ttcgcaccttccCTAAGCTTCGTGTGCTGGATTTGTTTACCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCAAGAAGTTTCAGTCGGTTAGCTTGCTGGAAGAGTACCTGCGTTCATCACCTTATGTGATGGACCaa > 1:370823‑M2/13‑143 (MQ=255) cgcaccttcccTAAGCTTCGTGTGCTGGATCTGCATTTCAAAATTGATCGTAAACCTTCAGCAAACCAATCAAAGAAGAAGTTTCAGTCGGTTAAGTTGCTGGAAGAGTACCTGCGTTCATCACCTTATGTGATGGACCAAtt > 1:656299/11‑143 (MQ=255) aaaTCATTCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgccagtgaattcagcagtaagcgccgtcagaccagaa < 1:267274‑M2/143‑129 (MQ=255) gcaccttccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCAAGAAGTTTCAGTCGGTTAGCTTGCTGGAAGAGTACCTGCGTTCATCACCTTCTGTTATGGCCCACTTa > 2:365117‑M2/10‑143 (MQ=255) ttCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacgcgacaagaga < 2:32440‑M2/143‑135 (MQ=255) ttCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaga > 2:356392‑M2/1‑9 (MQ=255) tgccCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCAAGAAGTTTCAGTCGGTTAGCTTGCTGGAAGAGTACCTGCGTTCATCACCTTATGTGATGGACCAATTAAAaga < 1:500683‑M2/139‑1 (MQ=255) tCACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagcacgcgccgtcagatcagaaaagagat < 1:261517‑M2/143‑136 (MQ=255) cACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaacgagatt < 1:355703‑M2/143‑137 (MQ=255) cCTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCAAGAAGTTTCAGTCGGTTAGCTTGCTGGAAGAGTACCTGCGTTCATCACCTTATGTGATGGACCAATTAAAAGAGGc > 1:450047‑M2/2‑143 (MQ=255) cTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCAAGAAGTTTCAGTCGGTTAGCTTGCTGGAAGAGTACCTGCGTTCATCACCTTATGTGATGGACCAATTAAAAGAGGCg > 2:368734/1‑143 (MQ=255) | AAAAAACGGTCATGGCGGTCGTTTTTGCGTTTGCCTGCGCAGGCTTGCTGATCTCTTTCATCCTGCCGCAAAAATGGACCAGCGCGGCGGTTGTCACGCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCAAGAAGTTTCAGTCGGTTAGCTTGCTGGAAGAGTACCTGCGTTCATCACCTTATGTGATGGACCAATTAAAAGAGGCG > NC_000913/618372‑618655 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |