New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 120780511 (0.180)38 (0.710) 27/250 1.2 75.4% coding (305/630 nt) stfP e14 prophage, uncharacterized protein
?NC_000913 = 1209602 15 (0.280)pseudogene (18/501 nt) stfE pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

GGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGG  >  NC_000913/1207663‑1207946
                                                                                                                                              |                                                                                                                                             
cattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAgg                                                                                                                                               >  2:893943‑M1/128‑143 (MQ=255)
 gTGCGAGCCGGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGGAAGAGTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGa                                                                                                                                              <  1:22278/143‑1 (MQ=255)
    cccgcccGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctct                                                                                                                                           <  1:1005191‑M1/140‑5 (MQ=255)
    ccAGCCTGGCGAAGGGGCGGCACGACCAGTTACTTACCGCGCTTCGCGCGCCGATGTTAAGCCGCGAGAATCCGTTTGGCGATATCGAATCGGATGGCACTGCGCACGCGCCTCTCGACAACCGAGGGATGGGGGAAggcgga                                                                                                                                           >  1:184963/1‑139 (MQ=17)
    ccAGCCTGGAGACGGGGCGGCACTACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCTGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctct                                                                                                                                           <  2:422525‑M1/143‑5 (MQ=255)
      aGCCTGGGGGAGGGGCGGCACGACCAGGTACTTACCGCACGTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgc                                                                                                                                         <  1:300003‑M1/143‑7 (MQ=255)
      aGCCTGGAGAAGGGGCGGCACGACCAGTTACGTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGACTCTCGAAAACCTTGGTTTGGGAGAAGGctctgc                                                                                                                                         <  2:368336‑M1/143‑7 (MQ=255)
      aGCCGGGAGAAGGGGCGGCACGAGCCGTTACGTACCGCACTTCGCACGCGGCGGTTAAGCCGCAAGAATCCGGTGGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCaaa                                                                                                                                         <  1:674054/143‑1 (MQ=18)
       ttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaagccccctgggaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCaaaa                                                                                                                                        >  2:905663‑M1/121‑143 (MQ=255)
       ggctcgcgacgcggccgcACGACCAGTGACTTACCGCACTCCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCaaaa                                                                                                                                        <  1:363155/131‑1 (MQ=18)
       gCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCGCTCGAAAGCCTGGGTTTGGGAGAAGGcggcgga                                                                                                                                        >  1:1062066‑M1/1‑136 (MQ=255)
        ccTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGACAACCTTGGTTTGGGAGAAGGctctgcat                                                                                                                                       >  2:662092‑M1/1‑135 (MQ=255)
        ccTGGACAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcat                                                                                                                                       <  2:175251‑M1/143‑9 (MQ=255)
         gtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACt                                                                                                                                      >  2:306450‑M1/119‑143 (MQ=255)
          tagatctgtgttctggtcatttgttgatgcgcgtacatagccaataagcatgttaaatccccctggtaggagccggaatgatgccctttgcttgttatttcttcattttcatatacgGTGGTTTGGGGGGAGGAGCAAaacac                                                                                                                                     <  1:431138‑M1/26‑3 (MQ=255)
          tagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTc                                                                                                                                     <  1:385928‑M1/26‑1 (MQ=255)
          tGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAACTCGGACCGCACTGCGCAAACGGCTCTAGAGTAGTACAGGTTGGGAGACGCAGCAAAACTc                                                                                                                                     >  1:1024285/1‑143 (MQ=17)
          tGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatta                                                                                                                                     >  2:778147‑M1/1‑133 (MQ=255)
           ggAGAAGGGGCGGAACGACCAGCTACTGACCGCACTGCGCGCGCGGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattac                                                                                                                                    <  2:523424‑M1/143‑12 (MQ=255)
            gatctgtgttctggtcatttgttgatacgcgtacatcgccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                                                                                   >  2:5819‑M1/116‑143 (MQ=255)
            gatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                                                                                   >  2:1031545‑M1/116‑143 (MQ=255)
            gatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                                                                                   >  2:1024579‑M1/116‑143 (MQ=255)
              tctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGGTTGGGAGGAGGAGCAAAACTCAATg                                                                                                                                 <  2:320184‑M1/30‑1 (MQ=255)
               ctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGGAGGAGCAAAACTCAATgc                                                                                                                                <  2:62560‑M1/31‑1 (MQ=255)
                tgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgca                                                                                                                               <  2:758337‑M1/32‑1 (MQ=255)
                 ggggCGGCATGTCCGGTTAGGTACCGCACGGCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                              <  1:308440‑M1/143‑18 (MQ=255)
                 ggggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                              <  1:817368‑M1/143‑18 (MQ=255)
                 ggggCGGCACGACCAGTGACTTACCGCATGTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAAGCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                              <  2:770702‑M1/143‑18 (MQ=255)
                 ggggCGCCACGACCCGTTACTTACCTCGCGTCCCGGGCGGCGTCTATGCCGCAAGAATCCGTTTGGCGTTATCAAATCGGATGGCACTGTGCAAACTGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                              <  1:974691‑M1/143‑18 (MQ=255)
                    gcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgctggtg                                                                                                                           >  1:827879‑M1/1‑123 (MQ=255)
                    gcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCaa                                                                                                                           >  2:591146/1‑143 (MQ=255)
                      ggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGAAACg                                                                                                                         >  2:716020/1‑143 (MQ=255)
                       gcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAACTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcc                                                                                                                        >  2:756967‑M1/1‑120 (MQ=255)
                       gcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCACACGGCTCTCGAACACCTCGGTCTGGGAGAAGGccctgcattccacgttggagccc                                                                                                                        >  1:714109‑M1/1‑120 (MQ=255)
                        cACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtccc                                                                                                                       <  1:1025780‑M1/143‑25 (MQ=255)
                         aCGACCAGTTACTTACCGCACTTCGCGCGCTGCTCTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccg                                                                                                                      <  2:826269‑M1/143‑26 (MQ=255)
                          cGACCAGTTACTTGCCGCTCTTCGCGCGGTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccgg                                                                                                                     <  1:29646‑M1/143‑27 (MQ=255)
                                gttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAg                                                                                                               >  2:790871‑M1/96‑143 (MQ=255)
                                gTTACTTACCGCACTTCGCGCGCTGCTGTTGCGCCGCGTGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAg                                                                                                               <  1:220277/143‑1 (MQ=255)
                                        gcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTCGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAcc                                                                                                       <  1:233490‑M1/56‑1 (MQ=255)
                                        ccGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttca                                                                                                       <  1:1037478‑M1/143‑41 (MQ=255)
                                        ccGCACTCCGCGCGCTGGTGTTAAGCCGCAAGAATCCGCTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttca                                                                                                       <  1:175973‑M1/143‑41 (MQ=255)
                                         cGCCCTGCGCGGGCTGGGCTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccctcag                                                                                                      <  1:761941‑M1/143‑42 (MQ=255)
                                          gCACTTCGCGCGCTGCGGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagc                                                                                                     <  2:295727‑M1/143‑43 (MQ=255)
                                             cTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggctgaaggccac                                                                                                  <  2:939104‑M1/143‑46 (MQ=255)
                                                 gcgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggctgaaggccacggaa                                                                                              <  1:662092‑M1/143‑50 (MQ=255)
                                                 gccgataagcatgtgaaatcccgctgggaaaagcaggagtgatgccatttgcttgttatttcttcattttcataaacgTTGGGTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa                                                                                              >  1:483994‑M1/79‑143 (MQ=255)
                                                    actcagcatgttacatcaccctggtaaaagcaggaatgaggtcatttgcttgttatttgtgcatgttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCt                                                                                           >  1:386246‑M1/76‑143 (MQ=255)
                                                     ataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCta                                                                                          <  2:402547‑M1/69‑1 (MQ=255)
                                                          catgttaaatccccctggtaaaagcaggaatgatgcaatttgcttgttatttcttcatgttcataaaggTTGGTGGGGGAGAAGGAGCAAAACTCAATGCGGCAACGGGTACGTTAGGACGCGCGGGGTGCATAGCTATACCg                                                                                     <  2:689718‑M1/74‑1 (MQ=255)
                                                           gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggct                                                                                    >  2:834098‑M1/1‑84 (MQ=255)
                                                           gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggct                                                                                    <  2:92978‑M1/143‑60 (MQ=255)
                                                             tAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTTCATTTGGACGCACCGGTTTCATAGTTATACCGGtt                                                                                  >  2:339710/1‑143 (MQ=255)
                                                             gttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGtt                                                                                  <  1:270321‑M1/77‑1 (MQ=255)
                                                             gtgaaacccccattgtaaacgcaggaatgatgtcattttcttgttatttctttattttcataaacgTTGGTTTTGGAGAAGGAGCAACACTCAATGCAGCAACGGCTTCATTAGGACGCACCGGTTTCATAGCTATACCGGtt                                                                                  >  1:508661‑M1/67‑143 (MQ=255)
                                                              ttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACACAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCCTAGCTATACCCGTTa                                                                                 <  2:81587‑M1/78‑1 (MQ=255)
                                                               aGCCGCACGAACCCGTGTGGCGATCTGAACGCGGATGGCACTGTGCAAACGGCTCTCGAAAACCCTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTAt                                                                                <  1:794369/143‑1 (MQ=255)
                                                                  cGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttccgccactccgccaacaggccggctgaa                                                                             >  1:847736‑M1/1‑77 (MQ=255)
                                                                      ccctggtaaaagcaggaatgatgtcatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                                         >  2:51224‑M1/58‑143 (MQ=255)
                                                                      ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCCCCGGCTCCTCAATCACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                                         >  2:1011427‑M1/58‑143 (MQ=255)
                                                                           gtagtagcaggaatgatgtcatttgcgtgttatttcttcatcttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTATGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAt                                                                    >  1:369426‑M1/53‑143 (MQ=255)
                                                                           gtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCCAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATCCCGGTTATGATTGGTGGTAt                                                                    <  1:685550‑M1/91‑1 (MQ=255)
                                                                              aaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                                 >  1:676667‑M1/50‑143 (MQ=255)
                                                                                    gATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggcaagctgtaactgaatggtgcggcctt                                                           >  1:504913‑M1/1‑59 (MQ=255)
                                                                                       gcgatcccttttgctggttatttcttcttttgcctaaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGt                                                        >  2:431138‑M1/41‑143 (MQ=255)
                                                                                          atgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAGTAGGACGCACAGGTTTCATAGCTATACCGTGTATGATTGATGGTATTGAGCAATGAGTAAt                                                     <  1:823459‑M1/106‑1 (MQ=255)
                                                                                             tCGGATGGCCCTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctga                                                  <  2:482794‑M1/143‑94 (MQ=255)
                                                                                              cggcgggcactgTGCCAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcgttacctgttggtgtcccggttccgtggccttcagccactccgccaacaggcgggctgaaatgcaatggtgcggctttttctgctgaa                                                 <  1:897051‑M1/138‑95 (MQ=255)
                                                                                              catttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAtt                                                 >  2:61421‑M1/34‑143 (MQ=255)
                                                                                              cGGAGGGCACTGTCGAGACGGCTGTCGAAAGCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcccctccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaa                                                 <  1:104732‑M1/143‑95 (MQ=255)
                                                                                                tttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACAGCCACATTAGGACGCACCGGTTTCATACCTATCCCGGATATGATTGGTGGTATTGGGCGATCAGTAATCATtct                                               <  1:319780‑M1/112‑2 (MQ=255)
                                                                                                 aTGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaa                                              >  1:1017757‑M1/1‑46 (MQ=255)
                                                                                                   gcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTg                                            >  2:884031‑M1/29‑143 (MQ=255)
                                                                                                      tgttatttcttcatttgcataaaccTTGGTTTGGGAGAAGGAGCAAAACTCACTGCAGCAACGGCTAAATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTAGGGGTATTGAGCAATCAGTAATCATTCAGTgggg                                         >  1:129311‑M1/26‑143 (MQ=255)
                                                                                                      aCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGCGGTATTGAGCAACCAGTAATCATTCAGTgggg                                         >  2:997387/1‑143 (MQ=255)
                                                                                                         tatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTg                                      >  2:636539‑M1/23‑143 (MQ=255)
                                                                                                             aaaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactg                                  >  2:625521‑M1/1‑34 (MQ=255)
                                                                                                               ttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGc                                >  2:270321‑M1/17‑143 (MQ=255)
                                                                                                               ttcattgtcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGc                                >  2:534005‑M1/17‑143 (MQ=255)
                                                                                                                  attttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACAGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGc                             <  1:817290‑M1/130‑1 (MQ=255)
                                                                                                                    tctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcgaggg                           >  2:205735‑M1/1‑27 (MQ=255)
                                                                                                                    tctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaagg                           >  2:284090‑M1/1‑27 (MQ=255)
                                                                                                                             cgTTGGTTTGGCGGAAGGAGCAAAACTTAATGCAGCAACTGCTACATTAGGACGCACCGGTTTCATGGCTATATCGGTTATGATTGGTGGTATTGAACATTTATTCTTCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTg                  >  1:758337‑M1/3‑143 (MQ=255)
                                                                                                                             ccTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccga                  <  1:284090‑M1/143‑126 (MQ=255)
                                                                                                                              cTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctggagaatacccggaactggcaaaggcttatccggc                 >  2:626219‑M1/1‑17 (MQ=255)
                                                                                                                                tGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaa               >  2:57673‑M1/1‑15 (MQ=255)
                                                                                                                                   taTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTAAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTg            <  2:352763‑M1/141‑1 (MQ=255)
                                                                                                                                   TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTg            <  2:443700‑M1/143‑1 (MQ=255)
                                                                                                                                      gggTGAAGGctcggcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaat         <  1:263542‑M1/143‑135 (MQ=255)
                                                                                                                                       ggAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaatt        <  2:949926‑M1/143‑136 (MQ=255)
                                                                                                                                        GAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgggggg       <  1:1003314‑M1/143‑1 (MQ=255)
                                                                                                                                         AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGCTTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggggggg      <  2:440403‑M1/143‑1 (MQ=255)
                                                                                                                                         AGAAAGAGCAGTACTCAATGCAGCAGCGGCTACATTAGGACGCACCGGTTTCATGTCTATACTGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggggggg      >  1:351167‑M1/1‑143 (MQ=255)
                                                                                                                                           aatgAGCAAAACTCAATGCGGCACCGGTTCCATGAGGACGCACCGGTTTCATAGCTATACCGGTGATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGAt    <  2:891931/140‑1 (MQ=255)
                                                                                                                                             ggctctgcattacctgttggtgtcccgggtccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctga  <  2:162459‑M1/143‑142 (MQ=255)
                                                                                                                                             GGAGCAAATGTCGATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTTTACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTATGGGGGGTATgg  >  1:991275‑M1/1‑143 (MQ=255)
                                                                                                                                              |                                                                                                                                             
GGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGG  >  NC_000913/1207663‑1207946

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.