New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3790298	38 (0.930)	4 (0.100)	4/266	5.2	10.4%	intergenic (‑218/+21)	waaH/tdh	LPS(HepIII)‑glucuronic acid glycosyltransferase/L‑threonine 3‑dehydrogenase, NAD(P)‑binding
	?	NC_000913	= 3790302	33 (0.860)					intergenic (‑222/+17)	waaH/tdh	LPS(HepIII)‑glucuronic acid glycosyltransferase/L‑threonine 3‑dehydrogenase, NAD(P)‑binding
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATTATTTTTACAGGTGAGAGAGTCACTTCAGGGTAGAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAG  >  NC_000913/3790156‑3790434                                                                                                                                               |                                                                                                                                         attattTTTACAGGTGAGAGAGTCACTTCAGGGTATAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTgg                                                                                                                                          <  1:502569/143‑1 (MQ=255) attattTTTACAGGTGAGAGAGTCACTTCAGGGTAGAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTgg                                                                                                                                          >  2:258658/1‑143 (MQ=255)    attTTTACAGGTGAGAGAGTCACTTCAGGGTAGAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAAt                                                                                                                                       <  2:183118/143‑1 (MQ=255)    attTTTACAGGTGAGAGAGTCACTTCAGGGTAGAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGAATATCCTCAGATAAAAGGGCTGGAAt                                                                                                                                       >  2:67177/1‑143 (MQ=255)      ttttACAGGTGAGAGAGTCACTTCAGCGTAGAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCCTTATTACACTGACAGGATTTTACGTATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATAc                                                                                                                                     >  1:683287/1‑143 (MQ=255)       ttaaCAGGTGAGAGAGTCACTTCAGGGTAAAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATAcc                                                                                                                                    <  2:456793/140‑1 (MQ=255)               tGAGAGAGTCACTTCAGGGTAGAGAGATAATGAGAGCAGCTATCTAGGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTg                                                                                                                            >  2:136092/1‑143 (MQ=255)                 agagagTCACTTCAGGGTAGAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCGCTTAtt                                                                                                                          >  1:319423/1‑143 (MQ=255)                     tgTCACTTCGGGGGAGAGCGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTGTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCgtg                                                                                                                      <  1:553407/142‑1 (MQ=255)                         aCTTCAGGGTAGAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGAAAGGCTTTTACATATTTAACAGATTATCCTCAGATAAAAGCGCCGGAAAACAAGCCCtagcacctgtaaa                                                                                                                  >  1:10630/1‑131 (MQ=255)                          cTTCAGGGTAGAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAAt                                                                                                                 >  2:264400/1‑143 (MQ=255)                             cAGGGTAGAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATccc                                                                                                              <  1:620991/143‑1 (MQ=255)                               ggtgacacacagaaTGAGAGCAGCTATATAAGAGATCAGCATAATTACGATCTCTCTATTACACTCACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGTCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAg                                                                                                            <  2:407258/131‑1 (MQ=255)                                   agagagGTAAGGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCa                                                                                                        <  2:270794/143‑1 (MQ=255)                                   agagagATAATGAGAGCAGCAATATAAGATATCCGCGCCCCTGCGGACTGTGGATGACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCa                                                                                                        <  2:518652/143‑1 (MQ=255)                                               agagCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTcc                                                                                            <  1:715300/143‑1 (MQ=255)                                                   cagcTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACATATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGa                                                                                        <  1:145739/143‑1 (MQ=255)                                                     gcgatataAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCAAAGCTTGCCTTGTTATAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACt                                                                                      <  2:366369/140‑1 (MQ=255)                                                      cTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTg                                                                                     >  2:431420/1‑143 (MQ=255)                                                         tataAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGcc                                                                                  <  2:459439/143‑1 (MQ=255)                                                             agagATCAGCACAATTACGAACTCTTCATTACACTGACAGGATTTCACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGaa                                                                              <  2:438363/143‑1 (MQ=255)                                                                   gaGCACAATTACTAACTCTTTATTACACTGACAGGATTTTACAGATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATa                                                                        <  1:264400/142‑1 (MQ=255)                                                                    aGCACAATTACGAACTCTCTATAACACTGACGCGACCAAACTTCTTTATCAGATTACCCTCAGATCAAAGGGCTCGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAg                                                                       <  2:637606/143‑1 (MQ=255)                                                                               gAACTCTTTATTACACTGACAGGATTTTACATATATAACAGATTAGCCTCAGATAAAAGGGCTGGAATATCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCTGACTGGCCCGAACGCATAGCGTCAAAcccc                                                            >  1:510795/1‑143 (MQ=255)                                                                                           acacTGACAGGATGATACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTCCTGGCAatca                                                >  1:703180/1‑143 (MQ=255)                                                                                              ccgccAGGATTTTACAGATTTAACAGATTATCCTCAGAGAAAAGGGTTGGAATACCAGCCCTTGTTCGTGTTAATTCCAGCTGAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCg                                             <  2:285866/139‑1 (MQ=255)                                                                                                 aaaGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATa                                          <  1:461441/141‑1 (MQ=255)                                                                                                 aCAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATa                                          >  1:41847/1‑143 (MQ=255)                                                                                                             atatTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATgg                              >  2:134012/1‑143 (MQ=255)                                                                                                                 ttAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCCAAGCCCGTCTGGAACTCATCGATAGAGAAACGAAGGGGaa                          >  2:391055/1‑143 (MQ=255)                                                                                                                 ttAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTaa                          <  2:469029/143‑1 (MQ=255)                                                                                                                 ttAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCGGGAAATCATCGATAGAGAAACGAAGGGTaa                          >  1:145966/1‑143 (MQ=255)                                                                                                                             ccTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTCATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGaaa              <  2:558095/143‑1 (MQ=255)                                                                                                                               tCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGCAATGATCGGCGAAAGa            >  1:29120/1‑143 (MQ=255)                                                                                                                                 aGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATc          >  2:619488/1‑143 (MQ=255)                                                                                                                                      aaaGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGc     <  1:431420/143‑1 (MQ=255)                                                                                                                                       aaGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGCTCGGCGAAAGATCGAGGcc    >  1:326049/1‑143 (MQ=255)                                                                                                                                         gggCTGGTATTCCAGCCCTTGTTCGTGTTAATCCCAGCTTAGAATAACTTTCCCGGACTGGCCCGGACGCCTAGCGTCAAAGGCCATCTGGGAATCATCGATAGAGAAACGATGGGTAATGATCGGCGTACGATTGAGGCAAg  >  1:160735/1‑143 (MQ=255)                                                                                                                                          ggCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGAt                      <  2:6113/122‑1 (MQ=255)                                                                                                                                          ggCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGAt                      >  1:6113/1‑122 (MQ=255)                                                                                                                                               |                                                                                                                                         ATTATTTTTACAGGTGAGAGAGTCACTTCAGGGTAGAGAGATAATGAGAGCAGCTATATAAGAGATCAGCACAATTACGAACTCTTTATTACACTGACAGGATTTTACATATTTAACAGATTATCCTCAGATAAAAGGGCTGGAATACCAGCCCTTGTTCGTGTTAATCCCAGCTCAGAATAACTTTCCCGGACTGGCCCGAACGCATAGCGTCAAAGCCCTTCTGGAAATCATCGATAGAGAAACGATGGGTAATGATCGGCGAAAGATCGAGGCCAG  >  NC_000913/3790156‑3790434

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.