| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2290110 | NA (NA) | 42 (0.780) | 32/280 | 0.7 | 95.5% | intergenic (‑31/+2) | insH1/yejO | IS5 transposase and trans‑activator/pseudogene, autotransporter outer membrane homology,putative transport, Not classified, putative ATP‑binding component of a transport system |
| ? | NC_000913 | = 3526451 | 2 (0.040) | intergenic (‑304/‑16) | nudE/yrfF | adenosine nucleotide hydrolase, Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein | |||||
CAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2289969‑2290110‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTTGGCTATCGGCAAGCGTGGAGTTTAACTTGAGCATCATTAAGCACATCACAGTAACCGCTGATCATAGCAAACCCTCTGAAGGCGGAA < NC_000913/3526451‑3526310 CAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 2:937049/143‑1CAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 2:254539/143‑1CAAGAAAAGCTCTGGGCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGCCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:12996/143‑1 gcggaagTCTCTTGTCTGGTCTGTCGGCGCTTACTGCTGCGTTCACTGGCTGCGAACGTAAGTTGATGACTGGGGAGGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT < 2:401063/136‑1 CTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGCCCCATGAACTATGTTGTTTGATGGCTACAGCGGACAATCATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCA < 2:701240/143‑1 TTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAAGTAAGTTGATGACTCCTGATGAAGCCTGTTCTATGGCTCCAGATGACGAACATGATCTCATCTCCAGGACTGGATCGCGCCTTCCccaggcaccatc > 2:222909/1‑131 ACGGCGCTTACTGCTGAATTCTATTTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTC < 1:729440/143‑1 CTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCG < 2:930481/143‑1 TGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCATGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGAGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACgc > 2:200821/1‑141 GAAATCACTGTCGGCGAAGGTAAGGTGACGACTCAGGATGAACCCTGTTCTATGGCTCCAGACGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATA < 2:483074/143‑1 CACCGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGA < 1:57898/143‑1 TCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTG < 2:524638/143‑1 caatgtagtTTGTTGACTCATGATGATCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCTTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTT < 1:178341/134‑1 GAAGGTAAGTTGGTGACTCATTGTGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGGTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTT < 1:400531/143‑1 GTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTCGTCTGTCATGCGCAGTCAGTCGCACCACACAAAAAACATGAATCTGCGaattgct > 2:273946/1‑136 GTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTTGGCT > 1:300439/1‑143 GTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACATTCCTTAGTCTATCAAGCGAGGTAAGTCGCACCGAACAAAATCCTCGACTCTGCGGTTGGCT > 2:479082/1‑143 agtgactaccCATGGTGAGCGCTGTTCTATGCCTGCATCTGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATTATTCTGCGGTTGGCTATCG < 1:266564/133‑1 ATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTTGGCTATCGGCAA < 2:316110/143‑1 ATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTTGGCTAGCGGCAA > 1:506410/1‑143 TCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTTGGCTAGCGGCAAGCGTG > 2:40564/1‑143 CATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTTGGCTATAGGCGAGCGTGG > 1:76618/1‑143 ATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTTGGCTATCGGCAAGCGTGGAGTT < 1:350368/143‑1 AACCCTGTTCTATGGCTCCAGATGACAAACATGATCCCCTATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTTGGCCATCGGCACGCGAGGAGCTTAA > 1:220915/1‑143 cCCCTGTGCTATGGCTCCAGAGGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTTGATTGGTTGTGGTCAGTCGCACCGGACACAATACATGAGCCTGCTGTTGGCTATCGGCAAGCGTGGAGTTTAAC < 1:776516/142‑1 CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACCTGATTCTGCGGTTGGCTATCGGCAAGCGTGGAGTTTAACT > 2:933346/1‑143 CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCCGTTGGCTATCGGCAACCCTGGCGTTTtatt > 2:434875/1‑139 CTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACCTGCTTCTGCGGTCGGCTCTCGCCAAGCGGGGCGCTCAGCTTGAGCAT > 1:905523/1‑143 gctcctgtgtgCAAGCATGCTCTCATATCAGGTATTTGTTTGCGTCTTCCTTAGTCTGTCAGGCGTGGTCAGTGTCTCCGGACACAATACATGATTCTGCGGTTGGCTATCGGCAAGCGTGGAGTTTAACTTGAGCATCATTA < 1:358023/132‑1 CTCCAGATGACAAACGTGAGCGCAGACCAGGGACTTGGTCGCACCTGCCTTAGTCGGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTTGGCTATCGGCAAGCGTGGAGTTTAACTTGAGCATCATTAA < 2:191380/143‑1 GATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTTGGCTATCGGCAAGCGTGGAGTTTAACTTGAGCATCATTACGCACA > 2:95749/1‑143 GATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTTGGCTATCGGCAAGCGTGGAGTTTAACTCGCGCCTCATCAAGCccc > 1:42076/1‑140 AAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTTGGCTATCGGCAAGCGTGGAGTTTAACTTGAGCATCATTAAGCACATCACAG > 2:910124/1‑143 ACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTTGGCTATCGGCAAGCGTGGAGTTTAACTTGAGCATCATTAAGCACATCACAGTA > 1:273621/1‑143 tctTCTCATCTCGGGGACTTGTTCGCACCTTCCTTCGTCTGTCAGGCGTCGTCAGTCGCACCGGACACAATACATGATTCTGCGGTTGGCTATCTGCAAGCTTGGAGTTTAACTTGAGCATCATTAAGCACATCACAGTAACC < 1:270170/140‑1 gtcctcacagccGGGACTTCTTCGCACCTTCCTAGGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGACTCTGCGGTTGGCTATCGGCCAGCGTGGCGTTTAACTTGAGCATCATTAAGCACATCACAGTAACCG < 1:218884/131‑1 GATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAA > 2:501414/1‑69 GATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAA < 1:501414/69‑1 TCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTTGGCTATCGGCAAGCGTGGAGTTTAACTTGAGCATCATTAAGCACATCACAGTAACCGCT > 1:674233/1‑143 TCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTTGGCTATCGGCAAGCGTGGAGTTTAACTTGAGCATCATTAAGCACATCACAGTAACCGCT < 2:273621/143‑1 TCATATCAGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTAGCACCGGACACAATACATGATTCTGCGGTTGGCTATCGGCAAGCGTGGAGTTAAACTTGAGCATCATTAAGCACATCACAGTAAACGCTGA > 1:37870/1‑143 AGGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTTGGCTATCGGCAAGCGTGGAGTTTAACTTGAGCATCATTAAGCACATCACAGTAACCGCTGATCATAGC > 2:794957/1‑143 GGGACTTGTTCGCACCTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTTGGCTATCGCCAAGCGTGGAGATTAAAGTGAGCATCATTAAGCACATCACAACCACCGATGATCGTAtta > 1:227053/1‑140 CTTCCTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTTGGCTATCGGCAAGCGTGGAGTTTAACTTGAGCATCATTAAGCAAATCACAGCAACCGCTGATCATAGCAAACacacaaaacgaa > 1:265627/1‑131 CTTCCTGAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTTGGCTATCGGCAAGCGTGGAGTTTAACTTGAGCATCATTAAGCACATCACAGTAACCGCTGATCATAGCAAACCCTCTGAAGGCG < 2:208571/143‑1 CCTTAGTTGGTGAGGCGTGGTCAGTCGCACCCGACACAATACATGATTCTGCGGTTGGCTATCGGCAAGCGTGGAGTTTAACTTGAGCATCATTAAGCACATCACAGTAACCGCTGATCATAGCAAACCCTCTGAAGGCGGAA < 1:478221/143‑1 CAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2289969‑2290110‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTAGTCTGTCAGGCGTGGTCAGTCGCACCGGACACAATACATGATTCTGCGGTTGGCTATCGGCAAGCGTGGAGTTTAACTTGAGCATCATTAAGCACATCACAGTAACCGCTGATCATAGCAAACCCTCTGAAGGCGGAA < NC_000913/3526451‑3526310 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |