New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2024158	2 (0.030)	53 (0.770)	44/284	0.5	96.4%	coding (191/624 nt)	rcsA	transcriptional regulator of colanic acid capsular biosynthesis
	?	NC_000913	= 2290111	NA (NA)					intergenic (‑32/+1)	insH1/yejO	IS5 transposase and trans‑activator/pseudogene, autotransporter outer membrane homology,putative transport, Not classified, putative ATP‑binding component of a transport system

AAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACC  >  NC_000913/2289970‑2290249                                                                                                                                              |                                                                                                                                            aagaagATCGCTCTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCa                                                                                                                                            <  2:561610/143‑1 (MQ=2)   gAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGATGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTCCCAtc                                                                                                                                          >  1:791608/1‑142 (MQ=14)    ataaTGTCTTTTCTGGTCTTACGGCGATTACGGGGGAATGCACTGGCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATaa                                                                                                                                         <  2:763668/141‑1 (MQ=11)          tctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGt                                                                                                                                   <  2:425002/143‑1 (MQ=38)           ctgttCTGGTCTGACGGCGCTTGCTACTGGATGCTCTGTCGGCGATGGTAAGTTGATGACTCATGATGAACGCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTa                                                                                                                                  <  1:11048/140‑1 (MQ=11)           ctTTTCTGGTCTGACGTCGCTGACTGCTGAGTTCACCGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGTTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTa                                                                                                                                  <  1:309196/143‑1 (MQ=11)           ctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTa                                                                                                                                  <  2:733228/143‑1 (MQ=38)           ctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTa                                                                                                                                  <  2:694247/143‑1 (MQ=38)            ttttCTGGTCTGACGGCGCGTACTGCTGAATTCACTGTCGGCGAAGGTAGGTTGATGACTCATGGTGAACCCTGTTCTATGGCTCCAGCTGGCAAACATGATCTCATATCAGGGACTAGTTCAGGCTTTCCCTCACGCAGTAg                                                                                                                                 >  1:1132106/1‑143 (MQ=1)              ttCTGTTCTTACGTCGCTTACTGCTCAATTCACGGTCGGCGAAGGTAACTTCAACACCCAGGATGAACCCTGTTCTATGACTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGcc                                                                                                                               <  1:138429/143‑1 (MQ=14)                cTGGTCTGGCGGCGCTTACTGCTGCATGCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGccac                                                                                                                             <  1:337847/143‑1 (MQ=255)                   gTCTGCCGGCTCGTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCCTATCAGGGACTTGTTCGCACCTTCCATAACACTCTAGCCACCAg                                                                                                                          >  1:593637/1‑143 (MQ=14)                   gTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAg                                                                                                                          <  1:556476/143‑1 (MQ=255)                     cTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGaa                                                                                                                        <  2:878553/143‑1 (MQ=255)                        aCGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACTTGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAg                                                                                                                     <  2:879412/143‑1 (MQ=255)                                tACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCg                                                                                                             <  2:1177619/143‑1 (MQ=255)                                   tgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGaa                                                                                                          >  2:905783/1‑143 (MQ=255)                                   tgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCAGGATGAACCCTGTTCTATGGCTCCAGATGACAAACGTGATCTCATATCAGGGACTTGTTCGCACCTGCCGTAAGGCGGTAGGCAGAAGAACAGAGATTGGGGaa                                                                                                          >  2:844680/1‑143 (MQ=11)                                    gctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAAc                                                                                                         <  2:1019701/143‑1 (MQ=255)                                    gctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAAc                                                                                                         <  1:95765/143‑1 (MQ=255)                                        aaTTCGCTGGCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACa                                                                                                     <  1:705639/143‑1 (MQ=255)                                          ttCACTGTCGTCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACaaa                                                                                                   <  1:328670/143‑1 (MQ=255)                                           tCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAag                                                                                                  >  2:988675/1‑143 (MQ=255)                                             aCTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACCGGTATTGCGGAACGACAAcgag                                                                                                >  2:879342/1‑143 (MQ=255)                                                gTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGa‑aa                                                                                            <  1:410580/143‑1 (MQ=255)                                                gTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGa‑aa                                                                                            >  2:568450/1‑143 (MQ=255)                                                    gCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAgc                                                                                        >  1:681950/1‑142 (MQ=255)                                                            aaGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑ACCAGAATCAAAtc                                                                                >  1:464488/1‑142 (MQ=255)                                                            aaGTGGATGACTCATGATGAACCCTGTTCGATGGCTCCAGATCACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGAtt                                                                                <  1:255864/143‑1 (MQ=255)                                                                tgatgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATg                                                                            >  2:1083882/1‑143 (MQ=255)                                                                  atgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCa                                                                          >  1:374960/1‑143 (MQ=255)                                                                  atgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCCCCTAACAGGGACGTGTTCGCACCTTCCATAACGCTGTCGCCACCAGAACCGATATTGCGGAACGACACAGACT‑AACAGAACCAGACTGagcac                                                                          >  1:244375/1‑139 (MQ=18)                                                                    gaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCAtt                                                                        <  1:935649/143‑1 (MQ=255)                                                                      cTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGa                                                                      <  2:183317/143‑1 (MQ=255)                                                                       tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGACG‑AACAGAACCAGATTGATGCAATGAg                                                                     >  1:1082517/1‑143 (MQ=255)                                                                        cATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGc                                                                    >  2:796741/1‑143 (MQ=255)                                                                          tgatgaACCCAGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCtt                                                                  <  1:346769/143‑1 (MQ=255)                                                                            atgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTCGCCAACAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACGACACTGATGCATTgcccttcc                                                                >  1:14255/1‑136 (MQ=21)                                                                               gcgccTGTTCTATGGGTCCAGATGACGAACCTGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATc                                                             <  1:776444/140‑1 (MQ=255)                                                                               atcacggtgcTATGGCTGCAGATGACAAACATGATCGCATATCAGGGACTCGTTCGCACCTTCCATAACGCGGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATc                                                             <  2:623923/134‑1 (MQ=255)                                                                               aaCCCTGTTCTATGCCTCGAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATc                                                             <  1:19002/143‑1 (MQ=255)                                                                                  ccTGTTCTATGGCTCCAGATGACAAACATGATCTCAGATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTa                                                          >  2:943901/1‑143 (MQ=255)                                                                                      ttCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGCACGACAAAGAGA‑AACAGAACCAGACTGATGCATTGAGCTTTCATCCTATGaa                                                      >  1:122593/1‑143 (MQ=255)                                                                                         tATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGCAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATCGATGCATTGAGCTTTCATCCTATGAaatt                                                   >  2:25525/1‑143 (MQ=255)                                                                                          aTGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAaatta                                                  <  2:372155/143‑1 (MQ=255)                                                                                           tGGGTCCGGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAaattaa                                                 <  2:434532/143‑1 (MQ=255)                                                                                           tGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAaattaa                                                 <  2:1118188/143‑1 (MQ=255)                                                                                              cgccaaatgcaaatcATGATATCATATCCGTGACGTCTGCTGACCTTCCATAACGCTGTAGCCACCAGAACAGATATAGCGTAACGACAAAGAGT‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTg                                              <  1:126230/129‑1 (MQ=255)                                                                                               tCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACATTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGCCAAAGAGA‑AACAGGACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGc                                             >  2:306455/1‑143 (MQ=255)                                                                                                ccAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCt                                            >  1:1182473/1‑143 (MQ=255)                                                                                                   gATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGtt                                         <  2:372527/143‑1 (MQ=255)                                                                                                   gATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCGATGAAATTAATTGCTGtt                                         >  2:358389/1‑143 (MQ=255)                                                                                                       aCAAACATGAGCTCAGATCAGGGACGTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTaaaa                                     <  2:155215/143‑1 (MQ=255)                                                                                                         aaaCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGACAACAGAGGTTAATAG‑TTCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGc                                   >  1:851878/1‑143 (MQ=37)                                                                                                         aaaCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGc                                   >  1:38982/1‑143 (MQ=255)                                                                                                         aaaCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGc                                   >  1:762583/1‑143 (MQ=255)                                                                                                           aCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGATTTTAAAAgaaa                                 >  2:194491/1‑140 (MQ=255)                                                                                                             aTGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTg                               <  1:568450/143‑1 (MQ=255)                                                                                                             aTGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTg                               <  2:763045/143‑1 (MQ=255)                                                                                                              tGATCTCATATCAGGGACTTGTACGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATCGCGGAACGACAAAGAGA‑AACAGAACAAGATTGATGCCTTGAGCTTCAATCCTATGAAGTCAATTAATGTTAAAGGCATTgc                              >  1:524387/1‑142 (MQ=255)                                                                                                               gATGTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATGGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTggg                             <  1:978978/143‑1 (MQ=255)                                                                                                                  ctcATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTAc                          >  2:331917/1‑143 (MQ=255)                                                                                                                  ctcATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTGTCATCCTATGAAATTAATTGAGGTTAAAAGCATTGGGGAc                          >  1:746050/1‑143 (MQ=255)                                                                                                                   tcATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACa                         >  2:792174/1‑143 (MQ=255)                                                                                                                   tcATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTAGGTACa                         >  1:87507/1‑143 (MQ=255)                                                                                                                           gggACTTGTTCGCATCTTCCATAACTCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATAc                 <  1:1038226/143‑1 (MQ=255)                                                                                                                           gggACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAAAACAGATATTGCGGCACGACAAAAAAA‑AACAGAACGAGAATGATGCATTCACCTATCATCCTATCAACATAATCGCAGTCAGAACCAATGGGAACCGaaacaac                 >  1:395714/1‑139 (MQ=255)                                                                                                                           gggACTGGTTCGCACCTGCCATAACGCGGTAGCCCGCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATAc                 <  1:844680/143‑1 (MQ=255)                                                                                                                            ggACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATAcc                >  1:1058387/1‑143 (MQ=255)                                                                                                                                   ttCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGATAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAGAGCATTGGGTACAGAAAATACCCATAGCt         >  1:330310/1‑143 (MQ=255)                                                                                                                                   ttCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAACAGCATTGGGGACAGAGAATACCCATAGCt         >  2:998145/1‑143 (MQ=255)                                                                                                                                    tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGTATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTc        <  1:604005/143‑1 (MQ=255)                                                                                                                                    tCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTc        <  1:796741/143‑1 (MQ=255)                                                                                                                                      gCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCATATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCa      >  1:584680/1‑143 (MQ=255)                                                                                                                                      gCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCa      >  2:1059369/1‑143 (MQ=255)                                                                                                                                          cTTCCATAACGCTGTAGCCACCAGAACAGATATTGTGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATAcc  >  2:141813/1‑143 (MQ=255)                                                                                                                                              |                                                                                                                                            AAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGA‑AACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACC  >  NC_000913/2289970‑2290249

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.