| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,726,004 | G→A | intergenic (‑84/‑19) | ydhL ← / → nemR | DUF1289 family protein/transcriptional repressor for the nemRA‑gloA operon, quinone‑, glyoxal‑, and HOCl‑activated |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,726,004 | 0 | G | A | 100.0% | 105.4 / NA | 37 | intergenic (‑84/‑19) | ydhL/nemR | DUF1289 family protein/transcriptional repressor for the nemRA‑gloA operon, quinone‑, glyoxal‑, and HOCl‑activated |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (24/13); total (24/13) | |||||||||||
AAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGT > NC_000913/1725869‑1726141 | aaaTTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATctacta < 1:206789/143‑1 (MQ=255)aaaTTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATctacta > 1:304741/1‑143 (MQ=255) aaTTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATCtactac > 1:552404/1‑143 (MQ=255) gCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATCTACTACACTCCAACg > 1:861870/1‑143 (MQ=255) cGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATCTACTACACTCCAACGCAt > 1:519486/1‑143 (MQ=255) gACGGGAAAGAACTCTAATTGCTCCGCCACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATctact > 2:661503/1‑120 (MQ=255) gACGGGAAAGAACTCTAATTGCTCCGCCACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATctact < 1:661503/120‑1 (MQ=255) cGGGCAAGCACTCTCATTGCTCCGCCACTTCGCCCTCCTCTGCTACGATTATTACCATTCTTGATGCTGTTCATGTCCATAGTAGCCACTTTGCTTGCACTAGACCGACTGATCTTCTACTCTCCTACGCATGAACAAactca < 2:235288/143‑1 (MQ=255) gggAAAGAACTCTAATTGCTCCGCCACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATCTACTACACTCCAACGCATGAACAAacacac > 2:67535/1‑143 (MQ=255) gAAAGAACTCTAATTGCTCCGCCACTTCGCCGTCCTCAGATAAGATGATTACCATTATTGAAGCTGTGAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATCTACTACACTCCAACGCATGACCAAACCCACCg > 1:602812/1‑143 (MQ=255) aGAACTCTAATTGCTCCGCCACTTCCCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAACGTAGCAACTTTGCTTGCACTAGCCCGACTGATCTACTACACTCCAACGCATGAACAAACACACCGaaa > 2:847268/1‑142 (MQ=255) ctctAATTGCTCCGCCACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATCTACTACACTCCAACGCATGAACAAACACACCGAACATGa < 2:278164/143‑1 (MQ=255) ctctAATTGCTCCGCCACTTCGCCCTCCCCAGTTCAACACACGTCACGGATTGAAGCTGTTAAAGACCAAAGTAGCAACTTCGCTAACAACACACAGACTGATCTACTACACCACAACGCATGAACAAACACACCgcgcacca > 2:842451/1‑136 (MQ=255) tctAATTGCTCCTCCACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATCTACTACACTCCAACGCATGAACAAACACACCGAACATGAt < 2:848883/143‑1 (MQ=255) aTTGCTCCGCCACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTc < 1:289288/143‑1 (MQ=255) tGCTCCGCCACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTcgc < 1:261118/143‑1 (MQ=255) cGCCACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACa > 1:186476/1‑143 (MQ=255) ccACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATCTACTACACTCCAACGCATGAACAAACACACCGAACCGGATAGTCGCGAACAtc > 1:690307/1‑143 (MQ=255) ccACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGAACTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCACACACAtc > 2:129594/1‑143 (MQ=255) cTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGGTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTcc > 1:592926/1‑143 (MQ=255) cGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTgg < 2:111220/143‑1 (MQ=255) gCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGc < 2:552404/143‑1 (MQ=255) tAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATGTACGACACTCCAACGCATGAACACACAAATCGAACATGATACTCTCGAACATCTCCTGACGACCGGCGAGCa > 2:297946/1‑143 (MQ=255) attattACCATTATTGAAGCTGTCAATGTCCAAAGGAGCAACTTTGCTTGCACTAGACCGACTGATCTACTACACTCCCACGCATGTACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGACGGGCGAGCAACtt < 2:444776/143‑1 (MQ=255) attaCCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGACGGGCGAGCAACTTTGc < 2:861870/143‑1 (MQ=255) cATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATCTACTACACTCCAACGCATGAACAAACACACCGAACACGACACTCGCGAACCTCTCCTGGCGACGGGCGAGCAACTTCGCCGGCa > 2:96945/1‑143 (MQ=255) attattGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGACGGGCGAGCAACGTTGCCTGCag > 1:468057/1‑142 (MQ=255) ccAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGACGGGCGAGCAACTTCGCCTGCAACGTGGATTCACCGGGATggg > 2:776170/1‑143 (MQ=255) cAAAGTAGCAACTTTGCTTGCACTAGACCGACTGATCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCCCCGGGATgggg > 1:802353/1‑143 (MQ=255) aaaGTAGCAACTTTGCTTGCACTAGACCGACTGATCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGc > 2:759760/1‑143 (MQ=255) aaaGTAGCAACTTTGCTTGCACTAGACCGACTGATCTACTACACGCCAACGCATGAACAAACACACCGAACATGATACTAGCGAACATCTCCTGGCGCCGAGCGAGCAACTCTGCCTGCAACATGGAGTCAGCGGGATgggga > 2:249323/1‑142 (MQ=255) tttGCTTGCACTAGACCGACTGATCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTa > 1:61697/1‑143 (MQ=255) tttGCTTGCACTAGACCGACTGATCCACTACACTCCAACGCATGAACAAGCACACCGAACATGATACTCGCGAACATCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTa < 1:347712/143‑1 (MQ=255) tAGACCGACTGATCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAACAACCGc > 1:39342/1‑143 (MQ=255) ccGAATGATCTACTACACTGCAACGCATGAACGAACACACCGAACATGATACGCGCGAACATCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGaa < 1:67535/143‑1 (MQ=255) cGACTGATCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAg > 1:488394/1‑143 (MQ=255) gACTGATCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGCTGGGGCTCAGCGCCCTACTCAACACCGCTGAAGt > 1:104585/1‑143 (MQ=255) | AAATTCCCCGGCACGGGCTCTGGACGGGAAAGAACTCTAATTGCTCCGCCACTTCGCCCTCCTCAGATAAGATTATTACCATTATTGAAGCTGTTAATGTCCAAAGTAGCAACTTTGCTTGCACTAGACCGACTGGTCTACTACACTCCAACGCATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGT > NC_000913/1725869‑1726141 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |