Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	3,815,859	Δ82 bp		[rph]–[rph]	[rph], [rph]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3815859	3815940	82	83 [0]	[0] 82	[rph]–[rph]	[rph],[rph]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3815858	0 (0.000)	76 (1.240)	63/262	0.0	100%	pseudogene (24/48 nt)	rph	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH
	?	NC_000913	3815941 =	0 (0.000)					pseudogene (609/669 nt)	rph	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH

AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCT  >  NC_000913/3815801‑3816082                                                                                                                                             |                                                                                                                                              ccctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGt                                                                                                                                             <  2:538022‑M2/3‑1 (MQ=255)  cctgcttgctcagcgcaaattcaataaaccggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTc                                                                                                                                            <  1:333388‑M2/4‑1 (MQ=255)       ttgctaatctcaaattcaatacactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTg                                                                                                                                       <  2:255240‑M2/9‑1 (MQ=255)        tgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGc                                                                                                                                      <  1:485668‑M2/10‑1 (MQ=255)         gctaagcgcaaattcgataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacacacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCa                                                                                                                                     <  1:785296‑M2/11‑1 (MQ=255)         gcgaagcgcaaattcaataaactggagctgatatggtttcatgccctcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCa                                                                                                                                     <  1:790198‑M2/11‑1 (MQ=255)          ctaggcgcaaattcaataaactggcgctgagatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCAc                                                                                                                                    <  2:448061‑M2/12‑1 (MQ=255)           taagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACt                                                                                                                                   >  2:468249‑M2/131‑143 (MQ=255)              gcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcataagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTCGACTtcg                                                                                                                                >  1:1186719‑M2/128‑142 (MQ=255)              gcgcaaagtcaaaaaactggcgctgatatggtgtcatgccttcgctactcatcctacttgtctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCa                                                                                                                                <  2:51402‑M2/16‑1 (MQ=255)               cgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTGCCCTGCACTTcac                                                                                                                               >  1:822832‑M2/127‑142 (MQ=255)                gcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAat                                                                                                                              >  2:624587‑M2/126‑143 (MQ=255)                gcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaagacgactcatcagtcgcattaaaaatcagtttgccggcgccgccttctgcCGTGCCCTGCACTtcact                                                                                                                              >  1:833942‑M2/126‑141 (MQ=255)                    attcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatgatg                                                                                                                          >  1:208197‑M2/122‑143 (MQ=255)                     ttcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATgc                                                                                                                         <  1:419870‑M2/23‑1 (MQ=255)                        aataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGcc                                                                                                                      >  1:418284‑M2/118‑143 (MQ=255)                        aataaactggcgctcatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGcc                                                                                                                      <  1:345943‑M2/26‑1 (MQ=255)                         agaaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacacatataaggtgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGccc                                                                                                                     <  2:1028902‑M2/27‑1 (MQ=255)                          taaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaacaaggcgactcatcagtcgccttaaacatcagtttgccagcgccgccttccgcCGTCCCCTGCCCTTCAATGATGCGCCCg                                                                                                                    >  2:779969‑M2/116‑143 (MQ=255)                              ctggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCtt                                                                                                                >  1:949653‑M2/112‑143 (MQ=255)                              ctggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCtt                                                                                                                <  2:29268‑M2/32‑1 (MQ=255)                                ggcgctgatacggtctcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCg                                                                                                              <  1:212361‑M2/34‑1 (MQ=255)                                   gctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtc                                                                                                           <  2:604458‑M2/37‑1 (MQ=255)                                   gctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGCCCCCTGCACTTCAATGATGCGCCCGGCTCCCGtc                                                                                                           >  2:1130721‑M2/107‑143 (MQ=255)                                   gctgatatggtttcatgccttcgcgccgcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtc                                                                                                           <  2:32999‑M2/37‑1 (MQ=255)                                       atatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtcatca                                                                                                       >  1:30795‑M2/103‑143 (MQ=255)                                         tatggtttcatgccttcgctcctcatcttactgttctacagacaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATCCGCCCGTCTTCGGTCAGCACt                                                                                                     >  2:623727‑M2/101‑143 (MQ=255)                                               tcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTc                                                                                               >  1:1057626‑M2/95‑143 (MQ=255)                                               tcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTc                                                                                               <  1:1104432‑M2/49‑1 (MQ=255)                                               tcatgccttcgctcctcatcttacttgtctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTc                                                                                               <  1:1104862‑M2/49‑1 (MQ=255)                                                 atgccttcgcccctcatcttacttttctacagccaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCAt                                                                                             <  2:1117070‑M2/51‑1 (MQ=255)                                                   gccttcgctcctcctcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGt                                                                                           <  2:1168515‑M2/53‑1 (MQ=255)                                                   gccttccctcctcatcttacttttctacggacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtgtgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGt                                                                                           <  1:205877‑M2/53‑1 (MQ=255)                                                     cttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCg                                                                                         <  1:447906‑M2/55‑1 (MQ=255)                                                          ctcctcatcttacttttctacagacaaaaagaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCCCTGATGCGCCCGTCGTCCGCCACTACTCAGTGCCTGCCGGtctc                                                                                    >  1:1141660‑M2/84‑143 (MQ=255)                                                          ctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCTTGTCGGtctc                                                                                    >  1:282984‑M2/84‑143 (MQ=255)                                                             ctcatcttgcttttctacatacaaaactaaggcgactcctcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTCCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGc                                                                                 <  2:629491‑M2/63‑1 (MQ=255)                                                             cccatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcaccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGc                                                                                 <  1:624587‑M2/63‑1 (MQ=255)                                                                  cttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTTCGGCag                                                                            >  1:533385‑M2/76‑143 (MQ=255)                                                                  cttactctgcaacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCag                                                                            <  1:305157‑M2/68‑1 (MQ=255)                                                                   ttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCaga                                                                           <  1:1025657‑M2/69‑1 (MQ=255)                                                                     acttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTACATGGCGGTCTCTGCGGCAGAGt                                                                         >  2:770538‑M2/73‑143 (MQ=255)                                                                        ttacaccagccacaaaaaaagcgcctcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCtt                                                                      <  1:73545‑M2/74‑1 (MQ=255)                                                                        tgtctacagacaaaaaaaaggcgactcagcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCtt                                                                      <  1:738196‑M2/74‑1 (MQ=255)                                                                           ctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCaa                                                                   <  2:615013‑M2/77‑1 (MQ=255)                                                                            tacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAAc                                                                  >  1:848214‑M2/66‑143 (MQ=255)                                                                            tacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAAc                                                                  >  1:544940‑M2/66‑143 (MQ=255)                                                                             acagacaaaaaaaaggcgactcatcagtcgccataaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCGTCGGGCATCACTACGTTCAGGTCGGTCTCTGCGGCAGAGGCTTCGACg                                                                 >  1:21713‑M2/65‑143 (MQ=255)                                                                               agacaaaaaaaaggcgactcatcattggctctaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGGCATCACTACGCGCATGTCGGTCTCTGCGGCAGCGCCTCCAacgca                                                               >  2:1038878‑M2/63‑141 (MQ=255)                                                                                gacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGGGTCTTCCACCTAt                                                              >  2:663542‑M2/62‑143 (MQ=255)                                                                                 acaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTAtt                                                             >  1:737283‑M2/61‑143 (MQ=255)                                                                                   aaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCCGCACTTCAATGATGCGCCCGCCCTCGCTCAACACTACGTTCAGGTCGGTCTCTGCCGCAGAGCCCTCAACGTATTcc                                                           >  2:355368‑M2/59‑143 (MQ=255)                                                                                     aaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttcggcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGGTCCTGTCGGTCTCTGCGGCAGAGTCTTCAACGTattctac                                                         >  1:622261‑M2/57‑140 (MQ=255)                                                                                      aaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGCTGCGCCCGTCTTCGGTCATCACTACGTTCCTGTCGGTCTCTGCGGCAGCGTCTTCCACGTATTCCAGa                                                        >  1:59504‑M2/56‑143 (MQ=255)                                                                                       aagaggcgactcaccagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGAt                                                       <  2:169321‑M2/89‑1 (MQ=255)                                                                                       aaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGAt                                                       <  1:602298‑M2/89‑1 (MQ=255)                                                                                        aaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATc                                                      <  1:964166‑M2/90‑1 (MQ=255)                                                                                         aaggcgactgatgagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCACCGTCTTCCAGATCg                                                     >  2:3877‑M2/53‑143 (MQ=255)                                                                                           ggcgactgatgagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCCGCGCCTTCAACGTATTCCAGACCGCa                                                   >  2:767974‑M2/51‑143 (MQ=255)                                                                                                 tcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGc                                             <  1:468249‑M2/99‑1 (MQ=255)                                                                                                   atcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCCGAGTCTTCTTCGCAGTCCAGTTCGCAAACagcat                                           >  1:230781‑M2/43‑141 (MQ=255)                                                                                                       gtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTGCATGTCGGTCTCTGCGCCAGAGTCTCCACCGTATTCCAGATCGCACACCGCCTCGcc                                       >  2:314170‑M2/39‑143 (MQ=255)                                                                                                          cccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGtt                                    <  2:858744‑M2/108‑1 (MQ=255)                                                                                                           ccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCCCTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCTCCGTCTTCCAGCTCGCACAGCGCGTCGCcgtaa                                   >  1:73280‑M2/35‑141 (MQ=255)                                                                                                             ttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGGCATCACTCCGTTCATGTCGGTCTCTGCGGCAGAGTCTTCACCGTCTTCCAGATGGCACACCCCTTCGCCGttccc                                 >  2:767483‑M2/33‑141 (MQ=255)                                                                                                                aaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCACACCGCTTAGCCGTTCACAAt                              >  2:439755‑M2/30‑143 (MQ=255)                                                                                                                 aaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAAtt                             <  1:1001362‑M2/115‑1 (MQ=255)                                                                                                                 aaagcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAAtt                             <  2:418284‑M2/115‑1 (MQ=255)                                                                                                                  aatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTc                            >  1:967272‑M2/28‑143 (MQ=255)                                                                                                                  aatcagtctgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTc                            <  2:319611‑M2/116‑1 (MQ=255)                                                                                                                    tcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCg                          >  1:993137‑M2/26‑143 (MQ=255)                                                                                                                     cagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGa                         <  2:30795‑M2/119‑1 (MQ=255)                                                                                                                      agtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGAc                        <  2:208197‑M2/120‑1 (MQ=255)                                                                                                                        tttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCCGATCGCAAACCGCTTCGCCGTTCACAATCGCGACAg                      >  1:584547‑M2/22‑143 (MQ=255)                                                                                                                        tttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATAGGAAACCGCCTCGCCGTTCACCAttccgcccg                      >  2:348299‑M2/22‑139 (MQ=255)                                                                                                                              cgcgccgccttctgcCGTCCCCTGCACTTCAATGATGCTCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTCCCCAATTCCGCCAGAAACTg                >  1:814721‑M2/16‑143 (MQ=255)                                                                                                                                    gccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTa          <  2:1057626‑M2/134‑1 (MQ=255)                                                                                                                                     ccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCAGCAGAGTCTTCAACGTATTCCAGATCGCAACCCGCTTCGCCGTCCACAATTCCGACAGAACCCGCGGCCAc         >  1:1012065‑M2/9‑143 (MQ=255)                                                                                                                                         ctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATc     >  1:765680‑M2/5‑143 (MQ=255)                                                                                                                                         ctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGACGAGCCTTCAACGTATTCCAGATCGCAAACCGCTTCGACGTTCACAATTCCGCCAGAAACTGCAGCTACCATc     >  2:1032649‑M2/5‑143 (MQ=255)                                                                                                                                            cCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTTCGGCAGAGTCTTCAACGAAAAAAAAATCACAAACCGCATCACCGTTCACAATTCCGACAGAAACTACGGCTACCATCCCt  >  1:25135‑M2/2‑143 (MQ=255)                                                                                                                                            cCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTCCACCATTCCGACAGAAACACcggccacccaccgc  >  2:740512‑M2/2‑137 (MQ=255)                                                                                                                                             |                                                                                                                                              AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCT  >  NC_000913/3815801‑3816082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑