New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1267118 =	36 (0.890)	3 (0.080)	3/272	6.1	8.2%	coding (195/393 nt)	ychQ	SIRB family inner membrane protein
	?	NC_000913	1267138 =	33 (0.850)					coding (215/393 nt)	ychQ	SIRB family inner membrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGCTACGTTATCAGAAGCATCCACAGGCATTTGCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCACTCGATTATCGTCGTATGCACAGTCAGCAGGCGCGCATTATTGCCTTCCCGCTGGCGTTGGTGGTGCT  >  NC_000913/1267003‑1267267                                                                                                                                        |                                                                                                                                  gtcTACGTTATCAGAAGCATCCACAGGCATTTTCTCGCTGGACGCGCATTGTGCCGGCGGTTGTCGATAACCTGTAACTGTTAGGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTACGGGCAGGcaccctgc                                                                                                                            >  2:96079/3‑138 (MQ=255) ggCCACGTTATCAGAAGCATCCACAGGCATTTGCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTgg                                                                                                                            >  2:95979/1‑143 (MQ=255)  gCTACGTTATCAGAAGCATCCACAGGCATTTGCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGc                                                                                                                           >  2:116930/1‑143 (MQ=255)     aCGTTATCAGAAGCATCCACAGGCATTTGCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGctga                                                                                                                        <  1:488686/143‑1 (MQ=255)       gTTATCAGAAGCATCCACAGGCATGTGCTCGCTGGACGCTCATTGTGCCGCCGGTTGTCGAGCCGCTGTTACGGTGAAGCGGCATTGCGTCGATGGCCAGAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGctgact                                                                                                                      <  2:334575/143‑1 (MQ=255)            cAGAACCATCCACTGGCATTTGCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGACGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGaaaa                                                                                                                 <  1:477776/143‑1 (MQ=255)                  cATCCACCGCCAGTTGCTCGCTCGACGCGCATCGTGCCGACGGTTGTCTATCCGCTCTTACTTTTAAGCGGCATTGCGTTGATGGGTAAAGCGAAAATCCCGCCAACTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGtt                                                                                                           <  1:697167/143‑1 (MQ=255)                   aTCCACAGGCATGTGCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGttt                                                                                                          <  1:587356/143‑1 (MQ=255)                     ccACAGGCATTTGCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTGCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTGTgg                                                                                                        >  1:589353/1‑143 (MQ=255)                             aTTTGCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCa                                                                                                <  2:269298/143‑1 (MQ=255)                                 gCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTta                                                                                            <  1:266603/143‑1 (MQ=255)                                  cTCGCTGCACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCCGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCACTtat                                                                                           >  2:654612/1‑143 (MQ=255)                                   tCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTtata                                                                                          >  1:321032/1‑143 (MQ=255)                                            gcgcATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGAGTGAAAAGCTGTTTGGAGGTGTCGTTGATATCGTTTTgg                                                                                 >  1:72146/1‑143 (MQ=255)                                            gcgcATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTGTGGAGTTATCATTTATATCGTTTTgg                                                                                 >  2:456072/1‑143 (MQ=255)                                                aTTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCCCATCCTGCCATTTTCAGGGCAGGCACAGTGGCTGACTGTAAAGCTGTTTGGCGTTATCATTTGTATCGTTTTggggtg                                                                             >  1:259603/1‑140 (MQ=255)                                                  tgtgCCGCTGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTa                                                                           <  1:180307/143‑1 (MQ=255)                                                       cgccgGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCa                                                                      >  1:18820/1‑143 (MQ=255)                                                                    tACGCTGTTACTGTTAAGGGGCATTGCGTTGGTGGCGCTACCCCACAGCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCACTCGATTAtcgtc                                                         <  2:516008/143‑1 (MQ=255)                                                                           ttactgttaAGCGGCATTGCGTTGATGGCTAGAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCACTCGATTATCGTCGTATGca                                                  <  2:128981/143‑1 (MQ=255)                                                                                 tgaaGCGGCATTGCGTTGATGGCTAAAGCGCACAGCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCACTCGATTATCGTCGTATGCACAGTca                                            <  1:160176/141‑1 (MQ=255)                                                                                  taAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCAGTCGATTATCGTCGTATGCACAGTcag                                           >  1:724613/1‑143 (MQ=255)                                                                                        gCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAACAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCACTCGATTATCGTCGTATCCACAGTCAGCAGgcg                                     >  1:640522/1‑143 (MQ=255)                                                                                         cATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTGATATCGTTTTGGGTTTTATTGCACTAGATTATAGTAGTATGCACAGTCAGCAGgcgc                                    >  2:5081/1‑143 (MQ=255)                                                                                          aTTGCCTTGATCGCTAAACAGGACCTCCTGCCATTTTCCGGGCAGGCACACTGGCTGACTGAAAAGCTTTTTGGAGTTATCATTTATACCGTTGTGGGTTTCATTGCTCTCGATTATCGTCGTATGCACAGTCAGCAGgcgcg                                   <  2:213767/143‑1 (MQ=255)                                                                                                     ggCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAACAGCTGTTTGGAGCTATCATTTATATCGTTTTGGGTTTTATTGCACTCGACGACCGTCGTATGCGCAGTCAGCAGGCGCGCcttatgcgct                        >  2:374471/1‑138 (MQ=255)                                                                                                      gCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATGTATATCGTTTTGGGTTTTATTGCACTCGAGTATCGTCGTATGCACAGTCAGCAGGCGCGCATTATTGCCtt                       >  1:195929/1‑143 (MQ=255)                                                                                                        tAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATCTCGTTTTGGGTCTTATTGCACTCGCTTATCGTCGTATGCACAGTCAGCAGGCGCGCATTATTGCCttgc                     >  2:369525/1‑141 (MQ=255)                                                                                                         aaaGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCACTCGATTATCGTCGTATGCACAGTCAGCAGGCGCGCATTCTTGCCTTccc                    >  1:241061/1‑143 (MQ=255)                                                                                                         aaaGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATATATATCGTTTTGGGTTTTATTGCACTCGATTATCGTCGTATGCACAGTCAGCAGGCGCGCATTATTGCCTTccc                    >  1:638550/1‑143 (MQ=255)                                                                                                            gcgcACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCACTCGATTATCGTCGTATGCACAGTCAGCAGGCGCGCATTATTGCCTTCCCGCt                 >  1:358167/1‑143 (MQ=255)                                                                                                             cgcACTTCCTGCCATCTTCCGCGCAAGCACAGGGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCCCTCGATTATCGTCGTATGCACAGTCAGCAGGCGCGCATTATTGCCTTCCCGCTg                <  2:149394/143‑1 (MQ=255)                                                                                                                acaGCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCGCTCGATTATCGTCGTATGCACAGTCAGCAGGCGCGCATTATTGCCTTCCCGCTGGCg             <  2:507297/143‑1 (MQ=255)                                                                                                                           ttttCCGGGCAGACACAGTGGCTGACTGTGAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTAGTGCACTCGATTATCGTCGTATGCACAGTCAGCAGGCGCGCATTATTGCCTTCCCGCTGGCGTTGGTGGTGCt  <  2:696013/143‑1 (MQ=255)                                                                                                                                        |                                                                                                                                  GGCTACGTTATCAGAAGCATCCACAGGCATTTGCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCACTCGATTATCGTCGTATGCACAGTCAGCAGGCGCGCATTATTGCCTTCCCGCTGGCGTTGGTGGTGCT  >  NC_000913/1267003‑1267267

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.