New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3222461 =	39 (0.960)	3 (0.080)	3/258	5.9	7.7%	intergenic (+12/‑172)	ebgR/ebgA	transcriptional repressor/evolved beta‑D‑galactosidase, alpha subunit
	?	NC_000913	3222493 =	37 (1.000)					intergenic (+44/‑140)	ebgR/ebgA	transcriptional repressor/evolved beta‑D‑galactosidase, alpha subunit
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GAGATGATGGGAAGTCAGGGCGTTAACCTGGTGTATGAAAAAGCCCGCGATGGTCGCGCGCTGCCGCTGTTAGTCTTCGTTCCCAGCAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAATTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATG  >  NC_000913/3222333‑3222603                                                                                                                                 |                                                                                                                                               gagaTGTTGGGAAGTCTGGGCGTTAACCTGGTGTATGAAAAAGCCCGCGATGGTCGCGCGCTGCCGCTGTTAGTCTTCGTTCCCAGCAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATc                                                                                                                                  <  1:367667/143‑1 (MQ=255)         gggAAGTCAGGGCGTTAACCTGGTGTATGAAAAAGCCCGCGATGGTCGCGCGCTGCCGCTGTTAGTCTTCGTTCCCAGCAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACCCTGTCCGGCACTCGGTTTTGc                                                                                                                          >  1:486711/1‑143 (MQ=255)         gggAAGTCAGGGCGTTAACCTGGTGTATGAAAAAGCCCGCGATGGTCGCGCGCTGCCGCTGTTAGTCTTCGTTCCCAGCAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGc                                                                                                                          >  1:206021/1‑143 (MQ=255)           gAAGTCAGGGCGTTAACCTGGTGTATGAAAAAGCCCGCGATGGTCGCGCGCTGCCGCTGTTAGTCTTCGTTCCCAGCAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCg                                                                                                                        >  1:292020/1‑143 (MQ=255)               tCAGGGCGTGAACCTGGTGTATTAAAAAGCCCGCGATGGTCGCGCGCTGCCGCTGTTAGTCTTCGTTCCCAGCAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACa                                                                                                                    <  2:100531/143‑1 (MQ=255)               tCAGGGCGGTAACCTGGTGTATGAAAAAGCACGCGATGGTCGCGCGCTGGCGCTGCTAGACTTCCTTCCCAGCCACTTAAAACTGCGCGCCACGACCCGTTAAAGCCCCTTACACACTGTCCGGCAATCGCCTTAGCCgcagg                                                                                                                    >  2:76124/1‑139 (MQ=255)                      gTTAACCTGGTGTATGAAAAAGCCCGCGATGGTCGCGCGCTGCCGCTGTTAGTCTTCGTTCCCAGCAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGtgctgc                                                                                                             >  1:141063/1‑143 (MQ=255)                      gTTAACCTGCTGTATGAAACAGCCCGCGATGGTCGCGCGCTGCCGCTGTTAGTCTTCGTTCCCAGCAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGtgctgc                                                                                                             <  2:460702/143‑1 (MQ=255)                           ccTGGTGTATGAAACAGCCCGCGATGGTCGCGCGCTGCCGCTGTTAGTCTTCGTTCCCAGCAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGttt                                                                                                        <  2:167967/143‑1 (MQ=255)                                    tGAAAAAGCCCGCGATGGTCGCGCGCTGCCGCTGTTAGTCTTCGTTCCCAGCAAATTAAGACTGCGCGGCACGACCCGTTGAATCTCCTTCCACACTGGCGGGCGACCGTTTTTGCCGGAGAGTGCGGCCGGTTATATTcaag                                                                                               >  2:24373/1‑140 (MQ=255)                                         aaGCCCGCGATGGTCGCGCGCTGCCCCTGTTAGTCTGCGTTCCCAGCAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCa                                                                                          <  2:475207/143‑1 (MQ=255)                                            cccGCGATGGTCGCGCGCTGCCGCTGTTAGTCTTCGTTCCCAGCAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGtt                                                                                       >  1:272978/1‑143 (MQ=255)                                               gcgATGGTCGCGCGCTGCCGCTGTTAGTCTTCGTTCCCAGCAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTaaa                                                                                    <  1:323802/143‑1 (MQ=255)                                               gcgATGGTCGCGCGCTGCCGCTGTTAGTCTTCGTTCCCAGCAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTCATCCCGTTaac                                                                                    >  1:553982/1‑142 (MQ=255)                                               gcgATGGTCGCGCGCTGCCGCTGTTAGTCTTCGTTCCCAGCAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTGTCGTGATCCAGTTaaa                                                                                    >  2:635274/1‑143 (MQ=255)                                               gcgATGGTCGCGCCCTGCCGCTGTTAGTCTTCGTTCCCAGCAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGTTGCCGTTTATTTTCGTGATCCAGTTaaa                                                                                    <  1:379736/143‑1 (MQ=255)                                                         cgcgcTGCCGCTGTTAGTCTTCGTTCCCAGCAAATGAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGGTTTTGCGGGGCAGTGCTGCCGTTTATGTTCGGGATCCAGTTAAAGTGAATGCaa                                                                          >  1:462717/1‑142 (MQ=255)                                                              tGCCGCTGTTAGTCTTCGTTCCCAGCAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTCCACCCTGTCCGGCAATCGTTTTTGCCGGACAGTGCGGCCTTTTATTTTCCTGATCCATTTAACGTAAATACATTTccc                                                                     >  1:260130/1‑143 (MQ=255)                                                                        agccTTCGTGCCCAGCAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTCCACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACtttt                                                           <  2:594610/140‑1 (MQ=255)                                                                        aGTCTGCGTGCCCAGCAAATTAAAGCTGCGCGGCACGACTCGTTAAATCTCCTTTCTCACTTTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACtttt                                                           <  2:553982/143‑1 (MQ=255)                                                                          tCTTCGTTCCCCGCACATTAAACCTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTa                                                         <  2:459511/143‑1 (MQ=255)                                                                          tCTTCGTTCCCAGCAAATTAAAACTGCGCGGCACAACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTa                                                         <  1:133506/143‑1 (MQ=255)                                                                          tCTTCGTTCCCACATTATTAAATCTGCGCGTCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTa                                                         <  2:2707/143‑1 (MQ=255)                                                                                    cagagaaTTAAGGCTGCGCGGCACGACCCGTTGAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAAttt                                               <  2:506413/138‑1 (MQ=255)                                                                                     aGCAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGCCTTTGCCGGACAGTGCTGCCATTCCTTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAATAAAAAttat                                              >  2:153746/1‑141 (MQ=255)                                                                                      gCAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAATTTTa                                             <  2:292020/143‑1 (MQ=255)                                                                                       cAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACCCACTGTCCGGCACTCGTTTTTGCCGGCCCGTGCTGCCGCTTATTTTCGTGATCCAGTTAAAGTAACTGCCTTTACCTGCCACTTTTTCCTAAACATCTTAc                                            >  2:620666/1‑143 (MQ=255)                                                                                        aaaTTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAATTTTACt                                           >  1:470499/1‑143 (MQ=255)                                                                                              gaaCGGCGAGGCACAACCCATTAAATCCCCATACACACCGGCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAATTTTACTAAACTc                                     <  1:73632/142‑1 (MQ=255)                                                                                                  tGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAATTTTACTAAACTCCCCa                                 <  2:523568/143‑1 (MQ=255)                                                                                                   gcgcGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGCCAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTCAATGCATTTACCTGCTACTTTTTAGTAAAAATTTTACTAAACTCCCCAg                                >  2:91868/1‑143 (MQ=255)                                                                                                               ccGTTAAATCCCCTTACACACTGTCCGGCAATCGGTGGTTCCGGACACTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGCAAATGCATGTACCTGCTACTTTTTAGTAAAAATTTTACTAAACTCCCCAGCAATTACACaaa                    >  2:295706/1‑143 (MQ=255)                                                                                                                cGTTAAATCCCCCTACACCCTGCCCCTCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAATTTTACTAAACTCCCCAGCAATTACACAAAc                   <  2:475409/143‑1 (MQ=255)                                                                                                                    aaaTCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAATTTTACTAAACTCCCCAGCAATTACACAAACTAcc               >  1:549997/1‑143 (MQ=255)                                                                                                                       tCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAATTTTACTAAACTCCCCAGCAATTACACAAACTACCATc            >  1:417973/1‑143 (MQ=255)                                                                                                                       tCCCCTTACACACTGTCCGGCAAGCGTTTTTGGCGGCCGTTACGTCCGGTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAATTTTACTAAACTCCCCAGCAATTACACAAACTACCATc            <  2:152151/143‑1 (MQ=255)                                                                                                                        ccccTTACACACTGTCCGGCAATCGTTTTTTTTTTTCTTTGCTGCCGTTTATTTCCTTGATCCATTTAAAGTGAATGCATGTACCTGCTAGTTTTTATTCAAAATTTTACTTAACTCCCCTGCAATTACACATACTACCATct           >  2:245338/1‑142 (MQ=255)                                                                                                                           cTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTCTTTTCGTGATCCAGTTAGCGTAAATGCATTTACCTGCTACTTTTTAGTAAAAATTTTACTAAACTCCCCAGCACTTACACAAACTACCATCACCa        >  2:323475/1‑143 (MQ=255)                                                                                                                           cTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAATTTTACTCAACTCCCCAGCCATTACCCAAACTACCCTCACCa        >  2:703878/1‑143 (MQ=255)                                                                                                                                 cacTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAACTTTACTAAATTCCTCTCCATTTACACAAACTACCATCACCAACAATg  >  2:150974/1‑143 (MQ=255)                                                                                                                                 |                                                                                                                                               GAGATGATGGGAAGTCAGGGCGTTAACCTGGTGTATGAAAAAGCCCGCGATGGTCGCGCGCTGCCGCTGTTAGTCTTCGTTCCCAGCAAATTAAAACTGCGCGGCACGACCCGTTAAATCCCCTTACACACTGTCCGGCAATCGTTTTTGCCGGACAGTGCTGCCGTTTATTTTCGTGATCCAGTTAAAGTAAATGCATTTACCTGCTACTTTTTAGTAAAAATTTTACTAAACTCCCCAGCAATTACACAAACTACCATCACCATGAATG  >  NC_000913/3222333‑3222603

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.