| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 702,066 | G→C | P229R (CCT→CGT) | nagA ← | N‑acetylglucosamine‑6‑phosphate deacetylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 702,066 | 0 | G | C | 100.0% | 47.4 / NA | 16 | P229R (CCT→CGT) | nagA | N‑acetylglucosamine‑6‑phosphate deacetylase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (10/6); total (10/6) | |||||||||||
TGGCGTCAGTAACCAGACACAGTTTGTCGCCTTTCAGACGTTTAGCGTTGCGAATGTTGGCGTAATCAACATGCAGGCCATCAGCAATAATACCGCAATAAATGTCAGCTTCGTCGAGGATCGCGCCCGCCAGGCCAGGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCA > NC_000913/701929‑702201 | tGGCGGCAGTAACCAGACACAGTTGGTCGCCTTTCAGACGTTTAGCGTTGCGAATGTTGGCGTAATCAACATGCAGGCCATCAGCAATAATACCGCAATAAATGTCAGCTTCGTCGAGGATCGCGCCCGCCAGGCCACGTTCa < 2:85338/143‑1 (MQ=255) tCGCCTTTCAGACGTTTAGCGTTGCGAATGTTGGCGTACTCACCATGCAGGCCATCAGCAATAATACCGCAATAAATGTCCGCTTCGTCGAGGATCGCGCCCGCCAGGCCACGTTCACGCCCGGTAATATACGGCCTCGCGta > 2:351554/1‑142 (MQ=255) gcgtgtCAGCCGTGTAGCGTTGCGAATGTTGGCGCAATCAACATGCAGGCCATCAGCAATAATACCGCAATCAATGTCAGCTTCGTCGAGGATCGCGCCCGCCAGGCCACGTTCACGACCGGTAATATACGGCATCGCGTTGt < 1:189220/138‑1 (MQ=255) aCGTTTAGCGTTGCGAATGTTGGCGTAATCAACATGCAGGCCATCAGCAATAATACCGCAATAAATGTCAGCTTCGTCGAGGATCGCGCCCGCCAGGCCACGTTAGCGACCGGTAATATACGGCATCGCGGTGTGCAGCTggg > 1:27772/1‑143 (MQ=255) aCGTTTAGCGTTGCGAATGTTGGCGTAATCAACATGCAGGCCATCAGCAATAATACCGCAATAAATGTCAGCTTCGTCGAGGATCGCGCCCGCCAGGCCACGTACACGACCGGTAATATACGGCATCGAGTTGTAGAGAgggg > 1:77435/1‑143 (MQ=255) cGTTGATCGTTGCGAATGTTGGCGTAATCAACATGCAGGCCATCAGCAATAATACCGCAATAAATGTCAGCTTCGTCGAGGCTCGCGCCCGCCAGGCTACGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGt < 2:326656/143‑1 (MQ=255) gCGAATGTTGGCGTAATCAACATGCAGGCCATCAGCAATAATACCGCAATAAATGTCAGCTTCGTCGAGGATCGCGCCCGCCAGGCCACGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTaa < 2:502325/143‑1 (MQ=255) cGAATGTTGGCTTAATCAACATGCAGGCCATCAGCAATAATACCGCAATAAATGTCAGCTTCGTCGAGGATCGCGCCCGCCAGGCCACGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAAt < 1:236556/143‑1 (MQ=255) aCATGCAGGCCATCAGCAATAATACCGCAATAAATGTCAGCTTCGTCGAGGATCGCGCCCGCCAGGCCACGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGGTGGGTGGCCAAGGTAATCCCCGCGCGGAAACCGGc > 1:70261/1‑143 (MQ=255) cAGGCCATCAGCAATAATACCGCAATAAAGGTCAGCTTCGTCGAGGATCGCGCCCGCCAGGCCACGTTCAAGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAAGCCCCGCGCGGGAACCGGCTtgtg > 1:121677/1‑143 (MQ=255) cAGCAACAATACCGCAATAAATGTCAGCTTCGTCGAGGTTCGCGCCCGCCAGGCCACGTTCACGACCGGTAAGATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTc < 1:443728/143‑1 (MQ=255) cGCAATAAATGTCAGCTTCGTCGAGGATCGCGCCCGCCAGGCCACGTTCACGACCGGTAATATACGGCATCGCGTTGTCCAGCTGGGTGGCAACGGCACTCCCCGCGCGGAAACCGGCTTCTGCTGCTTTCACCGTCGCGttc > 2:297040/1‑142 (MQ=255) tGTCAGCTTCGTCGAGGATCGCGCCCGCCAGGCCACGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCg > 1:489279/1‑143 (MQ=255) tCAGCTTCGTCGAGGATCGCGCCCGCCAGGCCACGTTCACGACCGGTAATATACGGCATCGCGATGTACAGATGGGTGGTAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCCTCTTGCAACGGCGCGGTGGAGGGAcacgc > 1:506964/1‑139 (MQ=255) ttCGTCGAGGATCGCGCCCGCCAGGCCACGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGaaa > 1:156070/1‑143 (MQ=255) tCGCGCCCGCCAGGCCACGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCCACCTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCg > 2:375945/1‑143 (MQ=255) gccgggccacGTTCACGACCGGTAATATTCGCCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTGGGTTTGGGTTTACCTACAAAAACCACAATCCCGGCATTTGc < 2:288208/143‑1 (MQ=255) ccggccacgTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCa < 2:251872/141‑1 (MQ=255) | TGGCGTCAGTAACCAGACACAGTTTGTCGCCTTTCAGACGTTTAGCGTTGCGAATGTTGGCGTAATCAACATGCAGGCCATCAGCAATAATACCGCAATAAATGTCAGCTTCGTCGAGGATCGCGCCCGCCAGGCCAGGTTCACGACCGGTAATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCA > NC_000913/701929‑702201 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |