| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,661,691 | C→A | A147A (GCG→GCT) | iscR ← | isc operon transcriptional repressor; suf operon transcriptional activator; oxidative stress‑ and iron starvation‑inducible; autorepressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,661,691 | 0 | C | A | 100.0% | 50.8 / NA | 16 | A147A (GCG→GCT) | iscR | isc operon transcriptional repressor; suf operon transcriptional activator; oxidative stress‑ and iron starvation‑inducible; autorepressor |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (9/7); total (9/7) | |||||||||||
CGTACATCACTCAATGCAAGGAATCAGGCTACCGGCTGGATGTACGACCGTGTTTACGGAGTATTTAGCACTCCGGCCTGATTCTGAATTCTTTTTATTAAGCGCGTAACTTAACGTCGATCGCGTCTTGTGTGCGGGTGCGTGGCGCGTCGTGAGTATGCTGACGACCAGACACATCCAGCACTTCCTGGTTATTAACCAGTTCGCCTAAAGTAATGTTGTTGAGAAAACCGGTGAGACGGTCGCTCAAATCACGCCACAGCGCGTGGGTCAGGCATTTATCGCCGCCC > NC_000913/2661546‑2661835 | cGTACATCACTCAATGCAAGGAATCAGGCTACCGGCTGGATGTACGACCGTGTTTACGGAGTATTTAGCACTCCGGCCTGATTCTGAATTCTTTTTATTAAGCGCGTAACTTAACGTCGATCGCGTCTTGTGTGCGGGTGCGTGgagc < 8:50661/148‑1 (MQ=255) tCAATGCAAGGAATCAGGCTACCGGCTGGATGTACGACCGTGTTTACGGAGTATTTAGCACTCCGGCCTGATTCTGAATTCTTTTTATTAAGCGCGTAACTTAACGTCGATCGCGTCTTGTGTGCGGGTGCGTGGAGCGTCGTGAGTAt > 1:43235/1‑149 (MQ=255) tACCGGCTGGATGTACGACCGTGTTTACGGAGTATTTAGCACTCCGGCCTGATTCTGAATTCTTTTTATTAAGCGCGTAACTTAACGTCGATCGCGTCTTGTGTTCGGGTGCGTGGAGATTCGTGAGTAAGCTGACGACCAGACACATc > 3:10557/1‑149 (MQ=255) tACGACCGTGTATACGGAGTATTAAGCACTCCCGCCTGATTCTGAATTCTTTTTATTAAGCGCGTAACTAAACGACGATCGCGTCTTGTGTCCGGGTGCGAGGACCGTCGTGAGTATGCTGCCGACCAGACACATCCAGGACTTCCTg > 8:154379/1‑148 (MQ=255) aCGACCGTGTTTACGGAGTATTTAGCACTCCGGCCTGATTCTGAATTCTTTTTATTAAGCGCGTAACTTAACGTCGATCGCGTCTTGTGTGCGGGTGCGTGGAGCGTCGTGAGTATGCTGACGACCAGACACATCCAGCACTTCCTGGt > 6:32063/1‑149 (MQ=255) cGACCGTGTTTACGGAGTATTTAGCACTCCGGCCTGATTCTGAATTCTTTTTATTAAGCGCGTAACTTAACGTCGATCGCGTCTTGTGTGCGGGTGCGTGGAGCGTCGTGAGTATGCTGACGACCAGACACATCCAGCACTTCCTGGt < 5:32063/148‑1 (MQ=255) aCCGTGTTTACGGAGTATTTAGCACTCCGGCCTGATTCTGAATTCTTTTTATTAAGCGCGTAACTTAACGTCGATCGCGTCTTGTGTGCGGGTGCGTGGAGCGTCGTGa > 6:164266/1‑109 (MQ=255) aCCGTGTTTACGGAGTATTTAGCACTCCGGCCTGATTCCGAATTCTTTTTATTAAGCGCGTAACTTAACGTCGATCGCGTCTTGTGTGCGGGTGCGTGGAGCGTCGTGa < 5:164266/109‑1 (MQ=255) gtTTACGGAGTATTTAGCACTCCGGCCTGATTCTGAATTCTTTTTATTAAGCGCGTAACTTAACGTCGATCGCGTCTTGTGTGCGGGTGCGTGGAGCGTCGTGAGTATGCTGACGACCAGACACATCCAGCACTTCCTGGTTAATAAc > 6:80158/1‑148 (MQ=255) cGGAGTATTTAGCACTCCGGCCTGATTCTGAATTCTTTTTATTAAGCGCGTAACTTAACGTCGATCGCGTCTTGTGTGCGGGTGCGTGGAGCGTCGTGAGTATGCTGACGACCAGACACATCCAGCACTTCCTGGTTATTAACCAGtt < 2:43235/148‑1 (MQ=255) cGGAGTATTTAGCACTCCGGCCTGATTCTGAATTCTTTTTATTAAGCGCGTAACTTAACGTCGATCGCGTCTTGTGTGCGGGTGCGTGGAGCGTCGTGAGTATGCTGACGACCAGACACATCCAGCACTTCCTGGTTAATAACCAggaa < 5:80158/149‑4 (MQ=255) tCCGGCCGGAGTCTGAAGTCTTTTTATTAAGCGCGTAACTTAACGTCGCTCGCGGCTTGTGTGCGGGTGCGTGGAGCGGCGTGAGTATGCTGACGACCAGACACATCCAGCACTTCCTGGTTATTAACCAGtt < 7:30723/133‑1 (MQ=255) aGCGCGTAACTTAACGTCGATCGCGTCTTGTGTGCGGGTGCGTGGAGCGTCGTGAGTATGCTGACGACCAGACACATCCAGCACTTCCTGGTTATTAACCAGTTCGCCTAAAGTAATGTTGTTGAGAAAACCGGTGAGACGGTCGCTc > 5:100400/1‑148 (MQ=255) gcgTAACTTAACGTCGATCGCGTCTTGTGTGCGGGTGCGTGGAGCGTCGTGAGTATGCTGACGACCAGACACATCCAGCACTTCCTGGTTATTAACCAGTTCGCCTAAAGTAATGTTGTTGAGAAAACCGGTGAGAc < 5:9516/137‑1 (MQ=255) gcgTAACTTAACGTCGATCGCGTCTTGTGTGCGGGTGCGTGGAGCGTCGTGAGTATGCTGACGACCAGACACATCCAGCACTTCCTGGTTATTAACCAGTTCGCCTAAAGTAATGTTGTTGAGAAAACCGGTGAGAc > 6:9516/1‑137 (MQ=255) gcgTAACTTAACGTCGATCGCGTCTTGTGTGCGGGTGCGTGGAGCGTCGTGAGTATGCTGACGACCAGACACATCCAGCACTTCCTGGTTATTAACCAGTTCGCCTAAAGTAATGTTGTTGAGAAAACCGGTGAGACGGTCGCTCAAAt < 6:100400/149‑1 (MQ=255) gTGGAGCGTCGTGAGTATGCTGACGACCAGACACATCCAGCACTTCCTGGTTATTAACCAGTTCGCCTAAAGTAATGTTGTTGAGAAAACCGGTGAGACGGTCGCTCAAATCACGCCACAGCGCGTGGGTCAGGCATTTATCGCCGccc > 1:72951/1‑149 (MQ=255) | CGTACATCACTCAATGCAAGGAATCAGGCTACCGGCTGGATGTACGACCGTGTTTACGGAGTATTTAGCACTCCGGCCTGATTCTGAATTCTTTTTATTAAGCGCGTAACTTAACGTCGATCGCGTCTTGTGTGCGGGTGCGTGGCGCGTCGTGAGTATGCTGACGACCAGACACATCCAGCACTTCCTGGTTATTAACCAGTTCGCCTAAAGTAATGTTGTTGAGAAAACCGGTGAGACGGTCGCTCAAATCACGCCACAGCGCGTGGGTCAGGCATTTATCGCCGCCC > NC_000913/2661546‑2661835 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |