| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,693,326 | C→G | 100% | R637R (CGG→CGC) | bcsA ← | cellulose synthase, catalytic subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,693,326 | 0 | C | G | 100.0% | 207.3 / ‑6.7 | 59 | R637R (CGG→CGC) | bcsA | cellulose synthase, catalytic subunit |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (28/29); minor base T (0/2); total (28/31) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
TGCGCCGCCAAGAACAATCAGGTTGTAGAACACCCACACCATACTGACGACCACGGTGAGCATCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGCCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCGGTGGTGCGATATACCACGCCAGCACCGTTTCGTAGATTTCAC > NC_000913/3693182‑3693468 | tGCGCCGCCAAGAACAATCAGGTTGTAGAACACCCACACCATACTGACGACCACGCTGAGCATCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGgcgc > 3:275968/1‑148 (MQ=255) cgccgcCAAGAACAATCAGGTTGTAGAACACCCACACCATACTGACGACCACGGTGAGCATCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCga < 2:12422/148‑1 (MQ=255) aaGAACAATCAGGTTGTAGAACACCCACACCATACTGACGACCACGGTGAGCATCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCAcc > 8:368339/1‑148 (MQ=255) aGAACAATCAGGTTGTAGAACACCCACACCATACTGACGACCACGGTGAGCATCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCa < 7:368339/149‑1 (MQ=255) aaTCAGGTTGTAGAACACCCACACCATACTGACGACCACGGTGAGCATCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGa > 6:350015/1‑149 (MQ=255) aTCAGGTTGTAGAACACCCACACCATACTGACGACCACGGTGAGCATCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGATAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGAc < 8:71527/149‑1 (MQ=255) ggTTGTAGAACACCCACACCATACTGACGACCACGGTGAGCATCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTAc < 3:220961/149‑1 (MQ=255) gTTGTAGAACACCCACACCATACTGACGACCACGGTGAGCATCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTAct > 6:261211/1‑149 (MQ=255) ttGTAGATCACCCACACCATACTGACGACCACGGTGAGCATCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTActc < 4:315747/149‑1 (MQ=255) gAACACCCACACCATACTGACGACCACTGTGAGCATCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTcttctt < 4:131570/149‑1 (MQ=255) gAACACCCACACCATACTGACGACCACGGTGAGCATCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACtcttct < 1:8865/148‑1 (MQ=255) gAACACCCACACCATACTGACGACCACGGTGAGCATCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTcttctt > 8:37366/1‑149 (MQ=255) cacCCACACCATACTGACGACCACGGTGAGCATCTCGGTTTGCGGGCCATATAAGTAGCGCCAGATGCCTACCGCAACGACCACCATGTTGAGCAGGACAATGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTcca < 5:255266/149‑1 (MQ=255) acCCACACCATACTGACGACCACGGTGAGCATCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTccac < 5:350015/149‑1 (MQ=255) acCATACTGACGACCACGGTGAGCATCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTcc > 8:112983/1‑149 (MQ=255) ccATACTGACGACCACGGTGAGCATCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCGGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCa > 7:165064/1‑149 (MQ=255) cTGACGACCACGGTGAGCATCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCttt < 7:58639/149‑1 (MQ=255) tGACGACCACGGTGAGCATCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTg > 7:175986/1‑149 (MQ=255) cACGGTGAGCATCTCGGTTGTCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGAGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGCTGa > 4:97926/1‑149 (MQ=255) aCGGTGAGCATCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGAc < 5:261211/149‑1 (MQ=255) gTGAGCATCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGtt < 4:275968/149‑1 (MQ=255) aTCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAAttt > 2:224929/1‑149 (MQ=255) tcGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCACCGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGcc > 2:248705/1‑149 (MQ=255) ggTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACTGCCACCAGGTTGATCAGGACAAGGAAGATTTAGGTGAGCGAGAGCACCCAGTCGACGTACTGTTCATCCACCAGTCAACCTTTGCCGGTGACGTTAAATTTGc < 2:113674/146‑1 (MQ=255) ggTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCt < 8:62827/148‑1 (MQ=255) cGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCg < 8:175986/149‑1 (MQ=255) cATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGCGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGGTAAATTTGCCTTTGTGCGGGtt > 1:205120/1‑148 (MQ=255) aTAGAAGTAGCGCCAGATTCCTACAGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATTAAGGGGCGCGAGATCACCCAGTAGACGTACTCTTCTTCCACCAGTCAAACTTTGGCGCTTACGAAAAATATTCCTTTGTGCGGGTTaa > 8:187691/1‑149 (MQ=255) gTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAgcg > 7:111481/1‑149 (MQ=255) gcgcCAGATGCCTTCCGCAACGCGCACCAGGTTGAGCATGAGAAGGACTATGTCGGCGCGCGAGATCACCGAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAATTATGCCTTTGTTCGGGTTAATCAGCGcca < 8:355776/149‑1 (MQ=255) ccTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCgg > 7:61664/1‑149 (MQ=255) cTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCttt < 2:307512/118‑1 (MQ=255) cTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCttt > 1:307512/1‑118 (MQ=255) cTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCggt > 8:1058/1‑149 (MQ=255) tACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAAGTTGCCTTTGTGCGGGGTAATCAGCGCCACCAGCGTCggtg > 1:35027/1‑149 (MQ=255) cAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCGGTGGTGCg < 1:224929/149‑1 (MQ=255) cAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCGGGGGTGCg < 1:128655/149‑1 (MQ=255) aCGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCGGTGGTGCGat < 2:24616/149‑1 (MQ=255) gCCCACCAGTTTGAGCAGGACAAGGAAGCTGTAGGGGCGCGAGATCACCCAGGCGACGTACTCTTCTTCCACCCGTCCACCTTTGGCGGGGACGTTAACTTTGCCTTTGTGCGGGTTAATCAGCGCCACCCGCGGCGGTGGTGCGatat < 2:205120/149‑1 (MQ=255) caccaGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCGGTGGTGCGATATAc > 1:87323/1‑148 (MQ=255) caccaGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCGGTGGTGCGATATAc > 5:115923/1‑148 (MQ=255) accaGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCggtgg < 8:81880/137‑1 (MQ=255) accaGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCggtgg > 7:81880/1‑137 (MQ=255) caGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCGGTGGTGCGATATACCACg > 7:335466/1‑149 (MQ=255) aGGTTGAGCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCGGTGGTGCGATATACCACGc < 8:61664/149‑1 (MQ=255) aGCAGTAAAAGTAAGATTTAGGGTCTCGATATATACCAGTCGAATTACTCTTCTTCCACCAGTACACATTTGGCGGTGACGTTAAATTTTCCTTTTTTCGGGTTAATCAGCGCCAGCAGCGTAGGTGGTGCTATATACCACTCCAGCa < 2:35027/148‑1 (MQ=255) gCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCgg < 7:34929/100‑1 (MQ=255) gCAGGACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCgg > 8:34929/1‑100 (MQ=255) ggACAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCGGTGGTGCGATATACCACGCCAGCACCGtt > 2:38393/1‑149 (MQ=255) aCAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCGGTGGTGCGATATACCACGCCAGCACCGTTTc < 8:165064/149‑1 (MQ=255) cAAGGAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCGGTGGTGCGATATACCACGCCAGCACCGTTTCg > 3:194035/1‑149 (MQ=255) ggAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCGGTGGTGCGATATACCACGCCAGCACCGTTTCg > 4:231868/1‑146 (MQ=255) ggAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCGGTGGTGCGATATACCACGCCAGCACCGTTTCGTAg < 7:112983/149‑1 (MQ=255) gAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCGGTGGTGCGATATACCACGCCAGCACCGTTTCg > 6:6800/1‑145 (MQ=255) gAAGATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCGGTGGTGCGATATACCACGCCAGCACCGTTTCGTAGa < 4:194035/149‑1 (MQ=255) gAAGATGTAGGGGCGCGAGATCACCAAGTAGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCGGTTGTGCGATATACCACGCCAGCACCGTTTCGTAGa < 3:97926/149‑1 (MQ=255) gATGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCGGTGGTGCGATATACCACGCCAGCACCGTTTCGTAGAttt > 2:234533/1‑149 (MQ=255) aTGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCCCCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCGGTGGTGCGATATACCACGCCAGCACCGTTTCGTAGATTTc > 4:179914/1‑149 (MQ=255) tGTAGGGGCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCGGTGGTGCGATATACCACGCCAGCACCGTTTCGTAGATTTCa < 7:37366/149‑1 (MQ=255) tAGGGTCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCTCCACCAGCGTCGGTGGTGCGATATACCACGCCAGCACCGTTTCGTAGATTTCAc < 4:242443/148‑1 (MQ=255) | TGCGCCGCCAAGAACAATCAGGTTGTAGAACACCCACACCATACTGACGACCACGGTGAGCATCTCGGTTGGCGGGCCATAGAAGTAGCGCCAGATGCCTACCGCAACGCCCACCAGGTTGAGCAGGACAAGGAAGATGTAGGGCCGCGAGATCACCCAGTCGACGTACTCTTCTTCCACCAGTCCACCTTTGGCGGTGACGTTAAATTTGCCTTTGTGCGGGTTAATCAGCGCCACCAGCGTCGGTGGTGCGATATACCACGCCAGCACCGTTTCGTAGATTTCAC > NC_000913/3693182‑3693468 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |