Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 572,621 IS2 (+) +5 bp coding (156‑160/456 nt) ybcN → DLP12 prophage; uncharacterized protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 381260 =NA (NA)38 (1.030) 34/236 0.2 100% noncoding (1/1331 nt) IS2 repeat region
?NC_000913 = 572625 0 (0.000)coding (160/456 nt) ybcN DLP12 prophage; uncharacterized protein
* ? NC_000913 = 382590NA (NA)37 (1.030) 30/230 0.3 100% noncoding (1331/1331 nt) IS2 repeat region
?NC_000913 572621 = 0 (0.000)coding (156/456 nt) ybcN DLP12 prophage; uncharacterized protein

TTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/381401‑381260
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGCCACGGTTTAAGCACCATGCGAAAGCATTTGCCCTCCTCCAGATAAGGCTGGATCTGCCGACCGATAGCGGTGAAGTTGCC  <  NC_000913/572625‑572502
                                                                                                                                                                                                                                                                          
TTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAC                                                                                                                            <  4:53311/144‑1
                   CTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGA                                                                                                     >  1:101286/1‑148
                        TTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAA                                                                                                    <  8:137288/144‑1
                        TTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAA                                                                                                    >  7:137288/1‑144
                                        ACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGCCAC                                                                               >  2:205761/1‑149
                                         CATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGCCACG                                                                              <  2:101286/149‑1
                                          ATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGCCACGG                                                                             >  1:80051/1‑149
                                            CAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGGCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGCCACGGTT                                                                           >  8:39989/1‑149
                                                      TTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGCCACGGTTTAAGCACCAT                                                                 >  2:188519/1‑149
                                                           CAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGCCACGGTTTAAGCACCATGCGA                                                             >  8:62086/1‑148
                                                                  TAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATT                                                                                                           <  1:100610/95‑1
                                                                  TAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATT                                                                                                           >  2:100610/1‑95
                                                                   AGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGCCACGGTTTAAGCACCATGCGAAAGCATTT                                                     >  8:51216/1‑148
                                                                   AGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGCCACGGTTTAAGCACCATGCGAAAGCATTT                                                     <  7:51216/148‑1
                                                                    GTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGCCACGGTTTAAGCACCATGCGAAAGCATTTGC                                                   >  3:153156/1‑149
                                                                       TAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGCCACGGTTTAAGCACCAAGAGAAAGCATTTGCCCT                                                >  4:20916/1‑149
                                                                          AAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCA                                                                                     >  7:87710/1‑109
                                                                          AAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCA                                                                                     <  8:87710/109‑1
                                                                          AAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTG                                                                                              >  5:132416/1‑100
                                                                          AAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTG                                                                                              <  6:132416/100‑1
                                                                                     AAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGCCACGGTTTAAGCACCATGCGAAAGCATTTGCCCTCCTCCAGATAAGG                                   <  4:153156/148‑1
                                                                                      AGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGCCACGGTTTAAGCACCATGCGAAAGCATTTGCCCTCCTCCAGATAAGGCT                                 <  1:205761/149‑1
                                                                                      AGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGCCACGGTTTAAGCACCATGCGAAAGCATTTGCCCTCCTCCAGATAAGGCT                                 <  2:80051/149‑1
                                                                                         aTATCACTTAAATAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGA                                                                                                 >  3:26075/2‑82
                                                                                         aTATCACTTAAATAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGA                                                                                                 <  4:26075/81‑1
                                                                                               CTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGC                                                                                  >  7:113110/1‑91
                                                                                               CTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGC                                                                                  <  8:113110/91‑1
                                                                                               CTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACT                                                                                               <  6:193857/78‑1
                                                                                               CTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACT                                                                                               >  5:193857/1‑78
                                                                                                  ATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCAC                                                                                    <  7:79781/86‑1
                                                                                                  ATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCAC                                                                                    >  8:79781/1‑86
                                                                                                     TAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGCCAC                                                                               <  7:57124/88‑1
                                                                                                     TAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGCCAC                                                                               >  8:57124/1‑88
                                                                                                       AGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGGAAGACTGCGTTTCTCACGCCACGGTTTAAGCACCATGCGAAAGCATTTGCCCTCCTCCAGATAAGGCTGGATCTGCCGACCGA                  >  4:106358/1‑147
                                                                                                          GATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGCCAGGGTTTAAGCACCATGCGAAAGCATTTGtc                                                  >  4:148932/1‑110
                                                                                                                GGTTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGCCACGGTTTAAGCACCATGCGAAAGCATTTGCCCTCCTCCAGATAAGGCTGGATCTGCCGACCGATAGCGGTGAA        <  7:39989/148‑1
                                                                                                                  TTGTCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGCCACGGTTTAAGCACCATGCGAAAGCATTTGCCCTCCTCCAGATAAGGCTGGATCTGCCGACCGATAGCGGTGAAGTT     >  2:199340/1‑149
                                                                                                                     TCTGGAGATTCAGGGGGCCAGTCTAACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGCCACGGTTTAAGCACCATGCGAAAGCTTTTGCCCTCCTCCAGATAAGGCTGGATCTGCCGACCGATAGCGGTGAAGTTGCC  <  3:20916/149‑1
                                                                                                                                                                                                                                                                          
TTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/381401‑381260
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACATGTGGCTGAGTGCATTCTGGGAAAGACTGCGTTTCTCACGCCACGGTTTAAGCACCATGCGAAAGCATTTGCCCTCCTCCAGATAAGGCTGGATCTGCCGACCGATAGCGGTGAAGTTGCC  <  NC_000913/572625‑572502

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.