| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 395,476 | G→T | S271Y (TCT→TAT) | ampH ← | D‑alanyl‑D‑alanine‑ carboxypeptidase/endopeptidase; penicillin‑binding protein; weak beta‑lactamase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 395,476 | 0 | G | T | 98.4% | 396.5 / ‑2.3 | 126 | S271Y (TCT→TAT) | ampH | D‑alanyl‑D‑alanine‑ carboxypeptidase/endopeptidase; penicillin‑binding protein; weak beta‑lactamase |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base T (64/60); total (65/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.06e-01 | |||||||||||
Only 100 of 126 total aligned reads displayed.
TCGGGGCCATATATACCCAACCTAAACCAAGCGCATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCAGATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGCAACCATTAAACGGCGGCACTGATCCGGTGAGGGGGT > NC_000913/395336‑395621 | tCGGTGCCATATATACCAAACCTAAACCAAGCGCATCCGCTTTTCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCTCTTATAACTCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGAc < 1:272514/146‑1 (MQ=255)tCGGGGCCATATATACCCAACCTAAACCAAGCGCATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGAc < 8:225293/146‑1 (MQ=255) gggCCATATATACCCAACCTAAACCAAGCGCATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATAc > 4:259844/1‑149 (MQ=255) gCCATATATACCCAACCTAAACCAAGCGCATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATActg < 4:233459/149‑1 (MQ=255) ccATATATACCCAACCTAAACCAAGCGAATCCGCTTTTCCTGGGACATACATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGATGATAAAAATCATATGACAAATActgc > 8:216484/1‑149 (MQ=255) cATATATACCCAACCTAAACCAAGCGCATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATActgct > 7:277847/1‑149 (MQ=255) atatatACCCAACCTAAACCAAGCGCATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCCACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATActgctg > 1:258460/1‑149 (MQ=255) atatatACCCAACCTAAACCAAGCGCATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATActgctg > 5:52800/1‑149 (MQ=255) atatatACCCAACCTAAAACAAGCGCATCCGCTTTGCCGGGGACATCCATGCCAATCACTATCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATActgctg > 5:380267/1‑149 (MQ=255) tatataCCCAACCTAAACCAAGCGCATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACtgctgc < 4:135046/149‑1 (MQ=255) tataCCCAACCTAAACCAAGCGCATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATActg < 8:341994/143‑1 (MQ=255) tataCCCAACCTAAACCAAGCGCATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATActg > 7:341994/1‑143 (MQ=255) cccAACCTAAACCAAGCGCATCCGCTTTGCCGGGGACCTCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAg > 2:165635/1‑149 (MQ=255) ccAACCTAAACCAAGCGCATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAgc > 5:254485/1‑149 (MQ=255) ccAACCTAAACCAAGCGCATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAgc < 8:277847/149‑1 (MQ=255) ccAACCTAAACCAAGCGCATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAgc > 7:164692/1‑149 (MQ=255) aaCCTAAACCAAGCGCATCCGCTTTGCCGGGGACATCCATGCCAATCATTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAccgc < 8:131899/149‑1 (MQ=255) aaCCTAAACCAAGCGCATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAgcg > 8:303823/1‑148 (MQ=255) ccAAGCGCATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATc > 3:239581/1‑149 (MQ=255) aGCGCATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATActgc > 5:317088/1‑126 (MQ=255) aGCGCATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGcc < 6:166582/149‑1 (MQ=255) gcgcATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCa < 8:182718/149‑1 (MQ=255) cgcATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCTCGCGCTGATAAATCAACGTCTGCATTCGATATGCCTGGTTACTGAGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATAATATCGCCAg < 6:392739/149‑1 (MQ=255) cgcATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAg > 6:111065/1‑149 (MQ=255) cgcATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAg < 1:369398/149‑1 (MQ=255) cgcATCCGATTTGCCGGGTACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACCTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGAAAAATACTGCTGCATCCAGCGCATCATATCGCCAg < 7:188478/149‑1 (MQ=255) cGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTg < 6:254485/148‑1 (MQ=255) gCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTgg > 4:111733/1‑148 (MQ=255) atttGCCGTTGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGAGATCTGCCTTGTTACTGCGCTGATAAAAATCATATTACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGaa < 6:87284/148‑1 (MQ=255) tttGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTACTGCATCCAGCGCATCATATCGCCAGGCGTGGaa > 1:138713/1‑148 (MQ=255) ttGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCAAGCGcatc < 7:368252/129‑1 (MQ=255) ccGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCTCATCATATCGCCAGGCGTGGAATAGAc < 1:6032/149‑1 (MQ=255) ccGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGAc > 4:360086/1‑149 (MQ=255) cGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAg > 8:388759/1‑135 (MQ=255) ggggACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGa > 2:27353/1‑141 (MQ=255) ggggACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGa < 1:27353/141‑1 (MQ=255) gACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGAcgccgc < 8:164692/149‑1 (MQ=255) aCATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGAcgccgcc > 1:56066/1‑149 (MQ=255) aTCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCAGATGACAAATGCTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGAcgccgccgc > 1:94963/1‑149 (MQ=255) ccATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGTCGCTg > 7:338073/1‑149 (MQ=255) ccATGCCAATCACTTTCGTAAACTGCGCGAGCTGATAAATCAACGTCTGCATCCGATCTGCCTGTTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCATCGcatca > 5:401261/1‑117 (MQ=255) cATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTTCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCAAGGCGTGGAATAGACGCCGCCGCTg < 5:162909/148‑1 (MQ=255) cATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGc < 4:235500/149‑1 (MQ=255) cATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGc > 5:214607/1‑149 (MQ=255) aTGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGc > 3:347840/1‑148 (MQ=255) tGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGcc < 6:340991/148‑1 (MQ=255) gCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGAATCATATCGCAAGGCGTGGAATAGACGACGCCGCTGCCaa > 1:120225/1‑149 (MQ=255) aaTCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTg > 5:301992/1‑149 (MQ=255) aTCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACaaa > 3:102422/1‑87 (MQ=255) aTCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACaaa < 4:102422/87‑1 (MQ=255) tCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTgcc < 6:52800/149‑1 (MQ=255) cACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTgccg > 1:100831/1‑149 (MQ=255) aCTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTgccgc > 1:128535/1‑149 (MQ=255) tttCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGCCTCCGCCGCTGCCAATTgccgc > 6:158064/1‑147 (MQ=255) tCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGc > 8:65478/1‑149 (MQ=255) cGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTACTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGc < 2:138713/148‑1 (MQ=255) gTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCgt > 2:410803/1‑149 (MQ=255) cTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTAt < 5:52177/149‑1 (MQ=255) cTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTAt > 2:293367/1‑149 (MQ=255) tGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGAc < 1:87869/69‑1 (MQ=255) tGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTAtt > 4:348600/1‑149 (MQ=255) cgcgcgcTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTgccgc > 7:323823/1‑135 (MQ=255) cgcgcgcTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTAtt < 2:56066/147‑1 (MQ=255) cgcgcgcTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTg > 3:160621/1‑148 (MQ=255) cgcgcgcTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGc < 3:360086/149‑1 (MQ=255) gcTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGa > 8:293360/1‑149 (MQ=255) gcTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGa > 8:353610/1‑149 (MQ=255) cTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGAc < 1:410803/149‑1 (MQ=255) cTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGAc < 2:128535/149‑1 (MQ=255) tGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACt > 8:41713/1‑149 (MQ=255) gATAAAACAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATCACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATACACGCCGCCCCTGCCAATTGTCGCCAGCGTCTTATTGCACGGACTg > 6:108305/1‑149 (MQ=255) aTAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCTGCGCATCATTTCGCCAGGCGTGGAATATACGCCGACGCTGCAAATTGCCGACAGCGTGTTATTGAACGGACt < 6:380267/147‑1 (MQ=255) aTAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTgg < 6:301992/149‑1 (MQ=255) aaTCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCa < 4:347840/148‑1 (MQ=255) aTCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGTACTGGCAcc > 3:37110/1‑149 (MQ=255) cAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTgg < 2:53159/143‑1 (MQ=255) tCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCTCTCa < 7:16625/149‑1 (MQ=255) cATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGCaa < 2:258460/149‑1 (MQ=255) cATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCAGATGACAAATGCTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGc < 2:94963/147‑1 (MQ=255) aTGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGTACTGGCACCGCGCTCAGCAAc < 4:37110/149‑1 (MQ=255) aTGCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCAAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGCAAc > 8:118664/1‑149 (MQ=255) gCGATCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGCAACCa > 3:765/1‑149 (MQ=255) aTCTGCCTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGCAACCAtt > 2:158435/1‑148 (MQ=255) ccTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGCAACCATTAAAcgg < 3:111733/149‑1 (MQ=255) ccTGGTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGCAACCATTAAAcgg > 8:363949/1‑149 (MQ=255) gTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGTCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGCAACCATTAAAcggcg < 8:338073/147‑1 (MQ=255) gTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGCAACCATTAAAcggcgg < 1:376830/148‑1 (MQ=255) gTTACTGCGCTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGCAACCATTAAAcggcgg < 7:41713/148‑1 (MQ=255) cgcTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGCAACCATTAAACGGCGGCACTGAt < 6:214607/148‑1 (MQ=255) gcTGATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGCAACCATTAAACGGCGGCACTGATcc < 7:65478/149‑1 (MQ=255) gATAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGCAACCATTAAACGGCGGCACTGCTCCGGt > 6:293621/1‑149 (MQ=255) aTAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCTCCGCTGCCAATTGCCGCCATCGTGTTATTGCACGGACTGGCAcc < 1:339070/111‑1 (MQ=255) aTAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGCAACCATTAAACGGCGGCACTGATCCgg < 7:293360/147‑1 (MQ=255) aTAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGCAACCATTAAACGGCGGCACTGATCCGGTg < 5:102406/149‑1 (MQ=255) aTAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCAGCCGCTGCCAATTGCCGCAAGCGTGTTATTGCACGGACTGTCAcc > 2:339070/1‑111 (MQ=255) tAAAAATCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGCAACCATTAAACGGCGGCACTGATCCGGt > 8:284069/1‑147 (MQ=255) aaaaTCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGCAACCATTAAACGGCGGCACTGATCCGGTGAgg < 6:363721/149‑1 (MQ=255) aaaTCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGCAACCATTAAACGGCGGCACTGATCCGGTGAggg > 4:186554/1‑149 (MQ=255) aaTCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGCAACCATTAAACGGCGGCACTGATCCGGTGAgggg > 1:273569/1‑149 (MQ=255) aaTCATATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGCAACCATTAAACGGCGGCACTGATCCGGTGAgggg < 4:765/149‑1 (MQ=255) | TCGGGGCCATATATACCCAACCTAAACCAAGCGCATCCGCTTTGCCGGGGACATCCATGCCAATCACTTTCGTAAACTGCGCGCGCTGATAAATCAACGTCTGCATGCGATCTGCCTGGTTACTGCGCTGATAAAAATCAGATGACAAATACTGCTGCATCCAGCGCATCATATCGCCAGGCGTGGAATAGACGCCGCCGCTGCCAATTGCCGCCAGCGTGTTATTGCACGGACTGGCACCGCGCTCAGCAACCATTAAACGGCGGCACTGATCCGGTGAGGGGGT > NC_000913/395336‑395621 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |