| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 2 (0.030) | 62 (0.800) | 57/280 | 0.2 | 96.9% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 2 (0.030) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
ATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCC > NC_000913/4001505‑4001782 | aTGGATTGATCTTGTCGAACCGGACGACGGCGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGTAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc < 2:1008735‑M1/143‑5 (MQ=255) gATTGATCTTGTGGAGCCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACAGCGAAGCATCGCCTCGTTTCTGTTAAGACGACGACGGCCTGCATctccttc < 2:1287574‑M1/143‑8 (MQ=255) aTCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATGTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATGGAAGCATCGGCACGTTGCGTTGAAGAGGACGACGGCCTGCAGatccttcttggt > 2:285643‑M1/1‑131 (MQ=255) aTCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttctt < 2:859890‑M1/143‑13 (MQ=255) tCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGGCGGCCTGCATctacttcttcttt > 2:949684‑M1/1‑130 (MQ=255) ctggtcgAACCGGACGACGACGAGCGACGGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttct < 2:262505‑M1/140‑15 (MQ=255) tGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttt > 2:902791‑M1/1‑127 (MQ=255) tCGAGCAGGCCGCCGACGGCCGACTGCGCGTACAATCTGACCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttga < 1:1010207‑M1/143‑19 (MQ=255) cGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaa < 2:1064605‑M1/143‑20 (MQ=255) cGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaa < 2:1047921‑M1/143‑20 (MQ=255) gAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGCACTGGAAGACATCGAAGCATCGGCACGATTCTTTGAAGACGGCGACGGCCTGCATctccttcttcttcctttacg > 1:717158‑M1/1‑123 (MQ=255) cGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttctactactttgcaggtgc > 2:92295‑M1/1‑119 (MQ=255) cgacgacgaGCGCCTGCGCGTACAATCTGAACTTGTCTAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaa < 1:845990‑M1/143‑29 (MQ=255) gacgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGCACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGGATctccttcttcttctttgcagatggcgaag > 1:805765‑M1/1‑114 (MQ=255) cgacgaGCGACTGCGCGTACACTCTCAACCTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGGGGCATCGGCACTTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagat < 1:816136‑M1/143‑32 (MQ=255) cgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcac < 2:1150581‑M1/143‑35 (MQ=255) gaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGCACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGATGACGACGACGGCCTGCATctccttcttcttctttgcagaggcgggagagcacg > 2:687246‑M1/1‑108 (MQ=255) tGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaa > 2:1251336‑M1/1‑101 (MQ=255) gcgcGTACCATCTGAACTTGGCAAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCCCGTTTCTTTGAACACGACGACGCCCTGCATctccttcttcttctttgaagatgcggaagctcacgccggtaac < 2:367360‑M1/143‑44 (MQ=255) aCAATCTGCACTTGGCCAGAGCCTTGCGACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccact < 1:240176‑M1/143‑50 (MQ=255) aCAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccact > 2:878908‑M1/1‑94 (MQ=255) aaTCTGAACTTGGCCAGAGCCCGGCAACCCGCCGGGAACTGTAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTTCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgt < 2:87391‑M1/143‑52 (MQ=255) cTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGGGTCTTTGAAGACGACGACGGCCTGCAGctcctccttcttctttgaagatgcggaagagcacgccggtaactccacagtggc > 2:162833‑M1/1‑89 (MQ=255) cTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtgccattta > 2:132868‑M1/1‑84 (MQ=255) ttGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttac > 2:589706‑M1/1‑83 (MQ=255) ccAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatc < 1:700173‑M1/143‑65 (MQ=255) cAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttgccatcc > 2:875365‑M1/1‑78 (MQ=255) gagCCTGGCACCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgt < 2:234392‑M1/143‑68 (MQ=255) ggcCTGGCAACCCGCCCGGAAGTGGAGGACATCGAGGCATCGGCACTTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttggaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtg < 1:1175554‑M1/142‑69 (MQ=255) agCCGGGCACCCCGCCCGGATCTGGAAGACATCGAAGCATCGTCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtg < 1:845082‑M1/143‑69 (MQ=255) gCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtga < 2:646561‑M1/143‑70 (MQ=255) cTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGACGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatg > 2:240746‑M1/1‑72 (MQ=255) cAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtga > 2:876968‑M1/1‑68 (MQ=255) cAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtga < 1:876968‑M1/137‑70 (MQ=255) aaCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgt < 2:1136290‑M1/143‑77 (MQ=255) tccgcccggAGCGGGAAGACATCGAAGCATCGGCACCTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtct < 1:186817‑M1/142‑79 (MQ=255) ctcgcccgGAGCGGGTGGTCATCGGGGCAGCGGCAAGTTTCTTTGAAGCCGTCGACGG‑‑TGCGCAT‑‑‑CTCAGTCTCCTCCTTTGATGATGCGGAAGCTCGCGCCGGTAACTCGACTGGGGCATTTACCATCCGTGATGGGCGTCt < 1:1291798/141‑1 (MQ=255) cccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgttt < 2:940858‑M1/143‑83 (MQ=255) cggggggagatcgaggcatCGGCACGTTTCTGTGAAGACGACGGCCGCCTGCATcccctccgtctgctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgc < 1:282973‑M1/134‑90 (MQ=255) cTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgctggtcgtctgtttactctgc > 2:1094749‑M1/1‑54 (MQ=255) aaGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtga < 2:598481‑M1/143‑94 (MQ=255) gACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagc < 2:1315621‑M1/143‑96 (MQ=255) gACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagc < 2:550776‑M1/143‑96 (MQ=255) cATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttctcctttgcagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgt < 2:474597‑M1/143‑98 (MQ=255) aTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaaatccactgtggcatttaccatccgcgatggccgtctgtttactctgcgcgagcgtg > 1:532248‑M1/1‑45 (MQ=255) tCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcggga > 2:432283‑M1/1‑44 (MQ=255) cGAAGCATCGGGACGTTTCTTTGGAGCCGGCGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtacctccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa < 1:495505‑M1/143‑101 (MQ=255) gAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCCTctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgagtgagcggggac > 1:991466‑M1/1‑42 (MQ=255) gCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttgttctgctttgaagatgcggaagagcacgccggtaaccccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgc < 2:580667‑M1/143‑105 (MQ=255) cATCGGCACGTTTCTGTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcaccccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcc < 2:1044827‑M1/143‑106 (MQ=255) gCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactcccctgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgctt > 1:425985‑M1/1‑33 (MQ=255) gCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgccggttttctctgcgtgagcgtgaactgcccgctt > 1:950545‑M1/1‑33 (MQ=255) tttCTTTGGAGACGTCGTGGCCCTGCACctccgtctgcttcttgggaggtgcggaagatcacgccggtaactccgctgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgt < 1:1218263‑M1/143‑116 (MQ=255) tCTTTGAAGACGACGCCGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtct < 1:949684‑M1/143‑118 (MQ=255) cTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgt > 1:437324‑M1/1‑25 (MQ=255) cTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgt < 2:437324‑M1/116‑92 (MQ=255) tttGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCACCTACAAAAATGCGGAAGATCACGCCGGTAACTCCACTGTAACACACACCAACCATAATCAACGTCTGTTTACTCTCCGTGACCATGAACTGCCCGCTTTTCGTCTGt > 1:896354/1‑143 (MQ=255) acgacgacgGCCTGCATctccttcttcttatttgcagatacggaggatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgagctgcccacttttcgcctgtcgcgtag > 2:258515‑M1/1‑17 (MQ=255) gacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtctgc > 2:1354021‑M1/1‑15 (MQ=255) gacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgc < 2:280845‑M1/143‑129 (MQ=255) gacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtggactgcccgcttttcgtctgtctcgtttgcgtg > 2:644166‑M1/1‑12 (MQ=255) ggCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtaagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgccc < 1:240746‑M1/143‑135 (MQ=255) ccTGCATctccttcttcttctttgaagatgcggaagagcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgt > 2:576099‑M1/1‑7 (MQ=255) gCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagc > 2:186910‑M1/1‑4 (MQ=255) | ATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCC > NC_000913/4001505‑4001782 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |