New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3620749 =NA (NA)3 (0.060) 3/484 NT 5.2% coding (1559/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain, putative neighboring cell growth inhibitor
?NC_000913 3621164 = 55 (1.090)coding (1974/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain, putative neighboring cell growth inhibitor

GTGCACCGCGAGGAAGGGCTGAGTCAGTACCGCGCATACGACAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGT  >  NC_000913/3620877‑3621452
                                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                                
tgtcccgtttctgctgccgtccggggcactgacggcggtcaggtcaccggcgatgttgtattcataccgcgtttcatggccctgcgtgtctttcacggcaattaactgtccacggctgtcgtatgcgcggtactgactcagcccttcctcgcggtgcaccgccgtcatctgcccgaagcggtcatggtcataacgggttacataaccggaacagtcggtgaagcccagcaactgaccgtaacggccccacgccctggtttcccggctcccgctcgcatcttccgttgc                                                                                                                                                                                                                                                                                                  >  1:29971‑M2/288‑288 (MQ=255)
gttcccgtttctgctgccgtccggggcattgacggcggtaaggtcaccggcgatgttatattcataccgcgtttcatggccctgcgtgtctttcccggcaattacctgtccacggctgtcgtatgcgcggtactgactcagcccttcctcgcggtgcaccgccgtcatctgcccgaagcggtcatggtcataacgggttacataaccggaacagtcggtgaagctcagcaactgaccgtaacggctccacgtcatggttttccggctgccggtggcatcttccgttgCg                                                                                                                                                                                                                                                                                                 <  1:127195‑M2/2‑1 (MQ=255)
 ttcccgtttctgtggcgttcgggggaagtgacggcgttcaggtcaccggcgatgttgtattcataccgcgtttcatggccctgcgtgtctttcacggcaattaactgtccacggctgtcgtatgcgcggtactgactcagcccttcctcgcggtgcaccgccgtcatctgcccgaagcggtcatggtcataacgggttacataaccggaacagtcggtgaagctcagcaactgaccgtaacggctccacgtcatggttttccggctgccggtggcatcttccgttgCg                                                                                                                                                                                                                                                                                                 <  2:95629‑M2/2‑1 (MQ=255)
 ttcccgtttctgctgccgtccggggcaatgacggcggtcagttcaccggcgatgttgtattcataccgcgtttcatggccctgcgtgtctttcacggcaattaactgtccacggctgtcttatgcgcggtactgactcagcccttcctcgcggtgcaccgccgtcatctgcccgaagcggtcatggtcataacgggttacataaccggaacagtcggtgaagctcagcaactgaccgtaacggctccacgtcatggttttccggctgccggtggcatcttccgttgCg                                                                                                                                                                                                                                                                                                 <  2:303563‑M2/2‑1 (MQ=255)
 gtcccgtttctgctgccgtccggggcaatgacggcggtcaggtcaccggcgatgttgtattcataccgcgtttcatggccctgcgtgtctttcacggcaattaactgtccacggctgtcgtatgcgcggtactgactcagcccttcctcgcggtgcaccgccgtcatctgcccgaagcggtcatggtcataacgggttacataaccggaaccgtcggtgaagctcagcaactgaccgtaacggctccacgtcatggttttccggctgccggtggcatcttccgttgCg                                                                                                                                                                                                                                                                                                 >  2:127195‑M2/287‑288 (MQ=255)
 gtcccgtttctgctgccgtccggggcaatgacggcggtcaggtcaccggcgatgttgtattcataccgcgtttcatggccctgcgtgtctttcacggcaattaactgtccacggctgtcgtatgcgcggtactgactcagcccttcctcgcggtgcaccgccgtcatctgcccgaagcggtcatggtcataacgggttacataaccggaacagtcggtgaagctcagcaactgaccgtaacggctccacgtcatggttttccggctgccggtggcatcttccgttgCg                                                                                                                                                                                                                                                                                                 <  2:454041‑M2/2‑1 (MQ=255)
 gtcccgtttctgctgccgtccggggcaatgacggcggtcaggtcaccggcgatgttgtattcataccgcgtttcatggccctgcgtgtctttcacggcaattaactgtccacggctgtcgtatgcgcggtactgactcagcccttcctcgcggtgcaccgccgtcatctgcccgaagcggtcatggtcataacgggttacataaccggaacagtcggtgaagctcagcaactgaccgtaacggctccacgtcatggttttccggctgccggtggcatcttccgttgCg                                                                                                                                                                                                                                                                                                 <  2:464679‑M2/2‑1 (MQ=255)
 gtcccgtttctgctgccgtccggggcaatgacggcggtcaggtcaccggcgatgttgtattcataccgcgtttcatggccctgcgtgtctttcacggcaattaactgtccacggctgtcgtatgcgcggtactgactcagcccttcctcacggtgcaccgccgtcatctgcccgaagcggtcatggtcataacgggttacataaccggaacagtcggtgaagctcagcaactgaccgtaacggctccacgtcatggttttccggctgccggtggcatcttccgttgCg                                                                                                                                                                                                                                                                                                 <  2:88805‑M2/2‑1 (MQ=255)
 gtcccgtttctgcggccgtccggggcaatgacggcggtcaggtcaccggcgatgttgtattcataccgcgtttcatggccctgcgtgtctttcacggcaattaactgtccacggctgtcgtatgcgcggtactgactcagcccttcctcgcggtgcaccgccgtcatctgcccgaagcggtcatggtcataacgggttacataaccggaacagtcggtgaagctcagcaactgaccgtaacggctccacgtcatggttttccggctgccggtggcatcttccgttgCg                                                                                                                                                                                                                                                                                                 <  2:99369‑M2/2‑1 (MQ=255)
 ggccgatttctgcgcccgaccggggcaaggacggcgggcaggtcaccggcgatgttgttttcataccgcgtttcatggccctgcgtgtctttcacggcaattaactgtccacggctgtcgtatgcgcgggactgactcagcccttcctcgcggtgcaccgccgtcatctgcccgaagcggtcatggtcataacgggttacataaccggaacagtcggtgaagctcagcaactgaccgtaacggctccacgtcatggttttccggctgccggtggcatcttccgttgCg                                                                                                                                                                                                                                                                                                 <  1:126844‑M2/2‑1 (MQ=255)
           ggagtggCTGGGGCAGTACCGGGGATACGACAGCCATGGACAGTTAATTGCTGTGAAAGACACGCAGGGCCATGGAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCAGTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGa                                                                                                                                                                                                                                                                                       <  1:174247/283‑1 (MQ=11)
           ggAAGGGCTGAGTCAGTACCGCGCATACGACAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGa                                                                                                                                                                                                                                                                                       <  2:28524/288‑1 (MQ=31)
           ggAAGGGCTGAGTCAGTACCGCGCATACGACAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGa                                                                                                                                                                                                                                                                                       <  1:144570/288‑1 (MQ=31)
           ggAAGGGCGGGGTCAGTACCGCGGAAACGACAGCCGTGGGAAGTTAATTGCCGGGAAAGACACGCAGGGCCAGGAAACGGGGTATGAATAAAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGGTGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGa                                                                                                                                                                                                                                                                                       <  1:425684/288‑1 (MQ=11)
                     aGTCAGTACCGCGCATACGACAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATa                                                                                                                                                                                                                                                                             >  2:262029/1‑288 (MQ=31)
                                cgcATACGACAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGAGACAGGAAAACgg                                                                                                                                                                                                                                                                  >  2:250903/1‑288 (MQ=14)
                                     aCGACAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGa                                                                                                                                                                                                                                                            <  2:281975/289‑1 (MQ=31)
                                          aGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTTACCGGCTGGTACAGGAAACCGGCTCTGCCGGc                                                                                                                                                                                                                                                        >  1:305237/1‑288 (MQ=14)
                                           gCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGcc                                                                                                                                                                                                                                                       >  1:117846/1‑288 (MQ=31)
                                            ccGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACCGGACACCGGCCTTGCCGGcag                                                                                                                                                                                                                                                      >  1:364794/1‑286 (MQ=14)
                                               tggacgttaaaTAGCCGTGAGAGACCCGCAGGGCCATGAAAGGCGGTATGAATACAACAGCTGCGGGGCCCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGAGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGcac                                                                                                                                                                                                                                                   <  1:163621/279‑1 (MQ=11)
                                                 gACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGcacac                                                                                                                                                                                                                                                 <  1:277677/288‑1 (MQ=31)
                                                      ttAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGAGGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCAAAGAGCGtt                                                                                                                                                                                                                                           >  2:135970/1‑289 (MQ=14)
                                                           tGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGGACACAGCGGTATca                                                                                                                                                                                                                                       >  2:8810/1‑288 (MQ=14)
                                                                tGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATTACGGAAACCGGCCTTGACGGCCGCCCACAGCGTTATCCCCACg                                                                                                                                                                                                                                  >  1:406543/1‑288 (MQ=9)
                                                                         cGCAGGGCCATGAACAGCAGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGTACGGCAGCAGAAACGGGACAGAGTACGATGCGTGTGGAAAGGCCGTCCGTACCACGCAGGGCTGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTAAAAACGTCAGCCACACCACCGTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCgg                                                                                                                                                                                                                        <  2:454389/289‑1 (MQ=11)
                                                                         cGCAGGGCCATCAAAGGCGGTATGAAGACAACAACGCCGGTGACCTGCCCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGTAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCgg                                                                                                                                                                                                                        <  1:135970/289‑1 (MQ=9)
                                                                                  aTGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGcacaca                                                                                                                                                                                                                                                <  2:70342/256‑1 (MQ=31)
                                                                                  aTGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGcacaca                                                                                                                                                                                                                                                >  1:70342/1‑256 (MQ=31)
                                                                                          cgGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGACGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACCGCCGCACACAGCGTCATCCCCCCGACCTTACCGGCAAACTTTACCGCAGCg                                                                                                                                                                                                       >  1:26256/1‑289 (MQ=9)
                                                                                           ggTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGa                                                                                                                                                                                                      <  2:117846/289‑1 (MQ=31)
                                                                                             gaTGAATACAAAAGCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGa                                                                                                                                                                                                                                                            <  2:253680/232‑1 (MQ=14)
                                                                                                gcatccaacaCCGCCGGTGACCTGACCGCCGTCCTTGCCCCGGCCGGCCACAGCAACGGAACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATg                                                                                                                                                                                                 <  1:230124/284‑1 (MQ=255)
                                                                                                     caacaTCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGAAGAGGGt                                                                                                                                                                                            >  2:230124/1‑289 (MQ=14)
                                                                                                       acaTCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCCGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGCCGGGTCATCCGCCTGACCAGTGACAACGGCAGCCACACCACCTTCCGTTCCGATGTACTTGACCGGCTTATACCGGACACCGGCTTTGACGGCCGcccc                                                                                                                                                                                                                                                  >  1:253680/1‑230 (MQ=11)
                                                                                                       acaTCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTCTCCGCAGCGAGGATGAggg                                                                                                                                                                                             >  2:57796/1‑286 (MQ=14)
                                                                                                       acaTCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAggg                                                                                                                                                                                             >  2:301195/1‑286 (MQ=31)
                                                                                                       acaTCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCCCCGCCAGGATGAggg                                                                                                                                                                                             >  1:11393/1‑286 (MQ=14)
                                                                                                       acaTCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGCTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGAACAAAGCGTTATCACCACGCCCTGACCGGCACACTTATCCGCAGCGCGGATGCGGGtat                                                                                                                                                                                          >  1:288423/1‑287 (MQ=9)
                                                                                                           cGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGt                                                                                                                                                                                       >  2:229035/1‑288 (MQ=31)
                                                                                                           cGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGGACTTGACCGGTCGATACAGGAAACCGGCTTCGACGGCCCCACCCCGCGTTAACACCACGGACCGACCGGACAACTTTACCGACGCGAGGACGAGGGTCTGGt                                                                                                                                                                                       >  1:318446/1‑288 (MQ=11)
                                                                                                                        cccgccctgcgtggtacGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCCCACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACt                                                                                                                                                                         >  1:36755/17‑289 (MQ=9)
                                                                                                                           gccgTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATg                                                                                                                                                                      <  1:60032/289‑1 (MQ=31)
                                                                                                                                       acGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGa                                                                                                                                                                                                                                                                                       >  1:306598/2‑164 (MQ=14)
                                                                                                                                       acGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGa                                                                                                                                                                                                                                                                                       <  2:306598/163‑1 (MQ=14)
                                                                                                                                       acGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGAcc                                                                                                                                                          <  2:36755/288‑1 (MQ=14)
                                                                                                                                        ctcagcccttcctcgcggtgcaccgccgtcatctgcccgaagcggtcatggtcataacgggttacataaccggaacagtcggtgaagctcagcaactgaccgtaacggctccacgtcatggttttccggctgccggtggcatcttccgttgCGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGAcc                                                                                                                                                          <  2:66731‑M2/137‑1 (MQ=255)
                                                                                                                                          gACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGAACTATGACGAAGCAGACCGc                                                                                                                                                        >  1:193596/1‑288 (MQ=14)
                                                                                                                                           aCGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGcc                                                                                                                                                       <  2:406543/288‑1 (MQ=31)
                                                                                                                                               cagcagAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCTTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCAGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCAc                                                                                                                                                   >  2:5817/1‑288 (MQ=14)
                                                                                                                                               cagcagAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTAACCGCAGCGAGGATGGGGGTCTGGTCACCCACTGGCCCTATGACGCAGCAGTCCGCCCCAc                                                                                                                                                   >  2:465664/1‑288 (MQ=9)
                                                                                                                                                      aaCGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCAcgcaccgc                                                                                                                                            <  2:487346/288‑1 (MQ=31)
                                                                                                                                                            acacAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCAc                                                                                                                                                                          <  2:291858/252‑1 (MQ=31)
                                                                                                                                                            acacAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCAc                                                                                                                                                                          >  1:291858/1‑252 (MQ=31)
                                                                                                                                                            acacAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTg                                                                                                                                      <  2:11393/288‑1 (MQ=31)
                                                                                                                                                                  tACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATg                                                                                                                                                                      >  1:135635/1‑250 (MQ=31)
                                                                                                                                                                  tACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATg                                                                                                                                                                      <  2:135635/250‑1 (MQ=31)
                                                                                                                                                                    tcatctgcccgaagcggtcatggtcataacgggttacataaccggaacagtcggtgaagctcagcaactgaccgtaacggctccacgtcatggttttccggctgccggtggcatcttccgttgCGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCAc                                                                                                                                                                          <  2:257243‑M2/121‑1 (MQ=255)
                                                                                                                                                                    tcatctgcccgaagcggtcatggtcataacgggttacataaccggaacagtcggtgaagctcagcaactgaccgtaacggctccacgtcatggttttccggctgccggtggcatcttccgttgCGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCAc                                                                                                                                                                          >  1:257243‑M2/124‑244 (MQ=255)
                                                                                                                                                                          gTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCa                                                                                                                                                                                                                      <  1:377179/194‑1 (MQ=31)
                                                                                                                                                                          gTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCa                                                                                                                                                                                                                      >  2:377179/1‑194 (MQ=31)
                                                                                                                                                                                 aaGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCagag                                                                                                                    <  2:406443/285‑1 (MQ=31)
                                                                                                                                                                                 aaGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCagag                                                                                                                    >  1:406443/1‑285 (MQ=31)
                                                                                                                                                                                               cACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTGACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGaa                                                                                                  <  1:229035/289‑1 (MQ=14)
                                                                                                                                                                                                  gCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGAACGt                                                                                               <  2:193596/289‑1 (MQ=31)
                                                                                                                                                                                                      ggcgggcTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTc                                                                                                                                                     <  2:307167/231‑1 (MQ=31)
                                                                                                                                                                                                      ggcgggcTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTc                                                                                                                                                     >  1:307167/1‑231 (MQ=31)
                                                                                                                                                                                                              gACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGGATGACGAACGTGGCTGGCTgaca                                                                                   >  2:150577/1‑289 (MQ=11)
                                                                                                                                                                                                                                                                                               CGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATg                                                                                                       >  2:111153‑M2/1‑188 (MQ=255)
                                                                                                                                                                                                                                                                                               CGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATg                                                                                                       <  1:111153‑M2/188‑1 (MQ=255)
                                                                                                                                                                                                                                                                                               CGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCg   >  1:415884‑M2/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                               CGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGGGAGCGt  >  1:464094‑M2/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                                
GTGCACCGCGAGGAAGGGCTGAGTCAGTACCGCGCATACGACAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGT  >  NC_000913/3620877‑3621452

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.