| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4485078 | 55 (1.090) | 4 (0.080) | 3/478 | NT | 6.4% | coding (875/1512 nt) | pepA | multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor |
| ? | NC_000913 | = 4485155 | 63 (1.270) | coding (798/1512 nt) | pepA | multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
ACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTCAGCGTCGGTGTTCAGCACTTCAACGGTTTGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4484786‑4485078‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgtGCTGGTGGGTAAAGGTTTAACCTTCGACTCCGGCGGTATCTCGATCAAGCCTTCAGAAGGCATGGATGAGATGAAGTACGATATGTGCGGTGCGGCAGCGGTTTACGGCGTGATGCGGATGGTCGCGGAGCTACAACTGCCGATTAACGTTATCGGCGTGTTGGCAGGCTGCGAAAACATGCCTGGCGGACGAGCCTATCGTCCGGGCGATGTGTTAACCACCATGTCCGGTCAAACCGTTGAAGTGCTGAACACCGACGCTGAAGGCCGCCTGGTACTGTGCG < NC_000913/4485155‑4484872 ACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTCAGCGTCGGTGTTCAGCACTTCAACGGTTTGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACCTA > 2:229249/1‑289ACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTCAGCGTCGGTGTTCAGCACTTCAACGGTTTGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATA > 2:292513/1‑289ACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTCAGCGTCGGTGTTCAGCACTTCAACGGTTTGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATA > 2:408871/1‑289ACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTCAGCGTCGGTGTTCAGCACTTCAACGGTTTGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATA > 2:45909/1‑289 CAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTCAGCGTCGGTGTTCAGCACTTCAACGGTTTGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCG < 2:330337/289‑1 CGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTCAGCGTCGGTGTTCAGCACTTCCACGGTTTGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCCTCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGT > 2:497018/1‑287 CGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTCAGCGTCGGTGTTCAGCACTTCAACGGTTTGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGT > 2:466394/1‑287 TCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTCAGCGCCGGTGTTCAGCACTTCCACGGTTTGACCGGACATGGTGGTTAAAACATCGCCCGGACGATACGCCCGTCCGCCAGGCCTGTTTTCGCCGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAACTCCGCGACCATCCGCATCACGCCGTCAACACCTGCCGCACCGTCCATATCctccttca > 1:431923/1‑280 GCACAGTACCAGGCGGCCTTCAGCGTCGGTGTTCAGCACTTCAACGGTTTGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTGCTGGTGGGTAAAGGTTTAACCTTCGACTCCGGCGGTATCTCGATCAAGCCTTCAGAAGGCATGGA > 1:100112/1‑272 GCACAGTACCAGGCGGCCTTCAGCGTCGGTGTTCAGCACTTCAACGGTTTGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTGCTGGTGGGTAAAGGTTTAACCTTCGACTCCGGCGGTATCTCGATCAAGCCTTCAGAAGGCATGGA < 2:100112/272‑1 CGGTGTTCAGCACTTCAACGGTTTGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTGCTGGTGGGTAAAGGTTTAACCTTCGACTCCGGCGGTATCTCGATCAAGCCTTCAGAAGGCATGGA < 1:225365/246‑1 CGGTGTTCAGCACTTCAACGGTTTGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTGCTGGTGGGTAAAGGTTTAACCTTCGACTCCGGCGGTATCTCGATCAAGCCTTCAGAAGGCATGGA > 2:225365/1‑246 ATCGTGCTGGTGGGTAAAGGTTTAACCTTCGACTCCGGCGGTATCTCGATCAAGCCTTCAGAAGGCATGGATGAGATGAAGTACGATATGTGCGGTGCGGCAGCGGGTTACGGCGTGATGCGGATGGTCGCGGAGCTACAACTGCCGATTAACGTTATCGGCGTGTTGGCAGGCTGCGAAAACATGCCTGGCGGACGAGCCTATCGTCCGGGCGATGTGTTAACCACCATGTCCGGTCAAACCGTTGAAGTGCTGAACACCGACGCTGAAGGCCGCCTGGTACTGTGCG > 2:126137/1‑289 ACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTCAGCGTCGGTGTTCAGCACTTCAACGGTTTGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4484786‑4485078‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgtGCTGGTGGGTAAAGGTTTAACCTTCGACTCCGGCGGTATCTCGATCAAGCCTTCAGAAGGCATGGATGAGATGAAGTACGATATGTGCGGTGCGGCAGCGGTTTACGGCGTGATGCGGATGGTCGCGGAGCTACAACTGCCGATTAACGTTATCGGCGTGTTGGCAGGCTGCGAAAACATGCCTGGCGGACGAGCCTATCGTCCGGGCGATGTGTTAACCACCATGTCCGGTCAAACCGTTGAAGTGCTGAACACCGACGCTGAAGGCCGCCTGGTACTGTGCG < NC_000913/4485155‑4484872 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |