New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4584202 =	28 (0.670)	3 (0.070)	3/272	6.2	9.4%	coding (2561/3513 nt)	hsdR	endonuclease R Type I restriction enzyme
	?	NC_000913	4584216 =	31 (0.770)					coding (2547/3513 nt)	hsdR	endonuclease R Type I restriction enzyme
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGCGGCCATCCGCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGA  >  NC_000913/4584095‑4584340                                                                                                            |                                                                                                                                           tGCGGCCATCCGCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACCCGCGCCACCGCGCTGTAGATATCGACACAGTCa                                                                                                         >  1:514173/1‑143 (MQ=255)      ccATCCGCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTCCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAAt                                                                                                    <  2:556131/143‑1 (MQ=255)       cagacGCTTCGGTGATTCTATAGGTTGCTGAATCGGTAATTTCAGTGACCAGCGTGTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATc                                                                                                   <  2:53397/139‑1 (MQ=255)        aTCCGCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTTCAGTTCCACCTTCGGGCGCACCACCACCGGGCGCATGGTGTCGACGCTCTCCAGCGTGCTGTGGATATCGACACAGTCAAACATCt                                                                                                  >  2:17083/1‑143 (MQ=255)        aTCCGCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGATGTCGCCGCTCTCCATCGTGCTGTTGATAGAGTACCAGTCAAAAATcg                                                                                                  >  1:164064/1‑142 (MQ=255)         tCCGCTTCAGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCtt                                                                                                 <  2:42548/143‑1 (MQ=255)                cGGTGATTTTATAGGTTTCTGAACCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTg                                                                                          <  2:131265/143‑1 (MQ=255)                     aTTTTATCGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGtttt                                                                                     <  2:523147/143‑1 (MQ=255)                        ttATAGGTGTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTAtt                                                                                  <  1:96726/143‑1 (MQ=255)                              gTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGCCGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTCAAGCTGGTTTTCTTCGCCTc                                                                            >  2:364473/1‑143 (MQ=255)                              gTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCCTGGTGTCGCCGCCAATCTGCGGGCTGTCGAGCTCGACGCAGTCAAAACGCCGCAAGCTGGttgttagcagcgc                                                                            >  1:255246/1‑132 (MQ=255)                                ttCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACCGTCAAACATCTTAAAGCTGGTTTTATTCACCTCCg                                                                          >  2:489478/1‑143 (MQ=255)                                          gTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGGCGCATGGTGTCCACGCTCTCCAGCGTGCGGTGGATACCGACACAGTCACGCCTCTTAAACCTGGTGTCAACCACACCCGGGCATacccc                                                                >  1:56451/1‑139 (MQ=255)                                          gTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAcgcg                                                                >  1:679248/1‑143 (MQ=255)                                                  aTTGACCAGCGTTTGCATCTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGgcgc                                                        <  2:46732/143‑1 (MQ=255)                                                   ttGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCCCCGGACGCATGGTGTCGACGCTCTCCAGCGGGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCCTACGCGCGTGGcgcg                                                       >  2:78970/1‑143 (MQ=255)                                                   ttGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATGAGCGCGTGGcgcg                                                       >  2:388235/1‑143 (MQ=255)                                                          gCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAACTCTTAAAGCTGGTTTTCTGCACCGCCGTGCATCAGCGCGTGGCGCGGCCTTTc                                                >  2:304011/1‑143 (MQ=255)                                                            gTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCAt                                              <  2:423910/143‑1 (MQ=255)                                                                  aGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCGAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTc                                        <  2:594964/143‑1 (MQ=255)                                                                  aGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTTTCCGCTGGGGATAGGGGCGAGGCGCGGCCTTTCTTCTGTTc                                        >  2:455444/1‑143 (MQ=255)                                                                  aGTTCCACCTGCGGGCGCGCCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTc                                        <  2:499839/143‑1 (MQ=255)                                                                    ttCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGCCGCTCTCCAGCGTGCTGTAGATATCGCCAGAGGCAAAAACCTCGACGCCGGTTTGATTCACCTCCGCGCATAAGGGGGTGGCGCGGCCtcccggcagtacgt                                      >  1:398393/1‑130 (MQ=255)                                                                               ggCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCgg                           <  2:560808/143‑1 (MQ=255)                                                                                   caccaccacCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGc                       <  2:630175/143‑1 (MQ=255)                                                                                          accGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACttt                <  1:337919/143‑1 (MQ=255)                                                                                             ggACGCAGGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACg             <  2:277443/143‑1 (MQ=255)                                                                                                        gccGACGCGCGCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTGTTATTCACCTCCGGGCCTAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGAGTACTTGACGCAGGAACACGa  <  1:262001/141‑1 (MQ=255)                                                                                                            |                                                                                                                                           TGCGGCCATCCGCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGA  >  NC_000913/4584095‑4584340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.