New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3270068 =29 (0.670)4 (0.100) 3/262 6.2 12.3% intergenic (+468/+146) yhaC/rnpB pentapetide repeats‑related protein/RNase P, M1 RNA component
?NC_000913 3270092 = 30 (0.750)intergenic (+492/+122) yhaC/rnpB pentapetide repeats‑related protein/RNase P, M1 RNA component
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAG  >  NC_000913/3269950‑3270233
                                                                                                                                              |                                                                                                                                             
aaaGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTa                                                                                                                                               <  2:723999/143‑1 (MQ=38)
   gTAAAAACCCGCTTCGGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTACTCTTCCCGCCCCTTCCTGACCTTTATCGCGCCCAAGCGGGATTTTACGt                                                                                                                                            >  2:281492/1‑143 (MQ=2)
      aaaaCCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCCCCAAAAGCAAAAACCCGCCGCAGCGGGGGTTTACGtcga                                                                                                                                         >  1:278954/1‑140 (MQ=11)
          cccGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAccgg                                                                                                                                     >  2:58964/1‑141 (MQ=37)
           ccgccgAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGTCCAGTCATTCATCCTTCTGCCCCTCCAAGAGCACAAACCCGCCGAAGCGGGTGTTTACGTAAACCAgg                                                                                                                                    >  1:560183/1‑143 (MQ=11)
                         ttttACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGAt                                                                                                                      >  2:132367/1‑143 (MQ=39)
                               gTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCCTTCATCTTTCTGCCACTCCAAAAGCAAAAACCCGCCGAAGCGGCAGTTTACGGAAACCAGGCGAAACTGACCCATGAGcgg                                                                                                                >  1:522364/1‑141 (MQ=11)
                               gTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCg                                                                                                                <  2:338162/143‑1 (MQ=38)
                                         taaaaCTGTCCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTg                                                                                                      <  1:70604/141‑1 (MQ=17)
                                          gaaacctcccGATAATCCGCTTTCTTTTTGGTATAGTGTCGTCGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTgg                                                                                                     <  1:631506/135‑1 (MQ=11)
                                          gAAACTGACCGAGATGCCGCATGCTGTTGGGTATGGTGTCGCGGACAGCCATTCATCTTACTGCCCCTCCAAAAGCAGAAACCCGCCGGAGCGGGTTTTTACGTACACCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTgg                                                                                                     <  1:417112/143‑1 (MQ=11)
                                              atggtcccgccgtcGCTGTCTTGTGGGTGTGGTTGCGTGGACAGTCAGTGTTCTTTCTGCCCCTCCAAAGGGTAAAACCCGCCGAAGCGGGTTGTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGtat                                                                                                 <  1:559723/130‑1 (MQ=11)
                                                  ccGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGcg                                                                                             <  2:445078/143‑1 (MQ=38)
                                                  acGACAAGCCGCTATCTTTTGAGTATAATGTCGTGGACAGTCATTCATCTTTCTGCCACTCCAAAAGCAAAAACCCGCCGAAGCGGGTTATTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGcg                                                                                             <  2:61416/142‑1 (MQ=11)
                                                                  ttttGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGtcattc                                                                             >  2:304007/1‑143 (MQ=38)
                                                                       ggTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTTGGGATAGCGTCGTGGATAGGCATTCATCtt                                                                        >  2:717016/1‑143 (MQ=255)
                                                                              ggtCGTGGACAGTCGTTCATCTTTCGGCCCCTCCAAAAACAAACCCGCCAGGAATCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCCGccc                                                                 <  2:207498/142‑1 (MQ=11)
                                                                                    ggACAGTCATTCCTCTTTCTGCCCCGCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCaa                                                           <  2:258567/143‑1 (MQ=255)
                                                                                        tattgatcatCTATCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGc                                                       <  2:21161/137‑1 (MQ=255)
                                                                                                        gCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCACAAACCCGCCGAAGc                                       >  2:298136/1‑143 (MQ=255)
                                                                                                          cccTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCCTCGTGGACAGTCATTCATCCTTCTACCCCCCCAAAACCACAAACCCGCCGCAGCgc                                     >  2:66511/1‑142 (MQ=14)
                                                                                                              ccAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAAc                                                 <  1:709231/127‑1 (MQ=39)
                                                                                                              ccAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAAc                                                 >  2:709231/1‑127 (MQ=40)
                                                                                                                 aaaGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGGTTTTa                              >  2:327146/1‑143 (MQ=38)
                                                                                                                  aaccAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGTGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTAc                             <  1:315361/140‑1 (MQ=25)
                                                                                                                          aCCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCgg                                     <  1:520170/127‑1 (MQ=35)
                                                                                                                           cccGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAg                    <  1:568672/143‑1 (MQ=21)
                                                                                                                              gccgAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAgggg                 >  2:300102/1‑141 (MQ=38)
                                                                                                                              gccgAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCCAAGCCGCATCTTACGTAAACCacaac                 >  1:366682/1‑139 (MQ=11)
                                                                                                                                 gAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGtca                                                                                <  2:561567/77‑1 (MQ=255)
                                                                                                                                             tACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAACGCAAAACCCCGCCGAAGCGGGTTTCTACAGCAATCCGGTCACCCTGCGCGATAAg  >  2:275606/1‑143 (MQ=11)
                                                                                                                                              |                                                                                                                                             
AAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAG  >  NC_000913/3269950‑3270233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.