New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 1571552 = | 49 (0.330) | 3 (0.020) | 3/474 | NT | 4.9% | coding (494/1401 nt) | gadB | glutamate decarboxylase B, PLP‑dependent |
? | NC_000913 | = 3667082 | 67 (0.450) | coding (498/1401 nt) | gadA | glutamate decarboxylase A, PLP‑dependent |
ATCCGGGGCGACGAACGGTGCCAGGAAGCCACCGCTGGCAGCGTCGATGTGCATGTCGATGTCGATACCGGTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAATCCATCAATTT > NC_000913/1571275‑1571826 | gatatccggggcgacgaacggtgccaggaagccaccgctggcagcgtcgatgtgcatgtcgatgtcgataccggtgtcggcctggaatttatccagcgcatcgtgcagcggttgtgggaactcatagttaccggtgtaggtcacgccgaaagtcggcaccacgccgatggtgttttcgtcacaggcttcaatcatgcgtttcgggtccataaacaactgaccggggcgcatagggatctcacgcagctccacatcccagtagcgggcgaatttatgcCAg > 1:478797‑M1/278‑280 (MQ=255) cgcGGGGCGACGAAGGGGGACAGAAGTCAACCGCGAGCGGGGTAGAGGGGCGTGTCGATGTCGATACCGGTATCGGCCTGGAATTTATCCGGAGCATCGTGCAGCGGTTGTGGGAACGCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCAGGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑At < 2:32039/279‑1 (MQ=11) cGGGGGGACGAACGGTGCCAGGAGACCACCGCGGGCAGTGTCGATGGTCATGTCGATGTGGGTACCGGTATCGGCCTGGAATTTATCCGGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTGCCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑At < 2:408838/279‑1 (MQ=11) gacgaACGGTGCCAGGAAGCCACCGCTGGCAGCGTCGATGTGCATGTCGATGTCGATACCGGTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCgg > 1:294526/1‑282 (MQ=32) cgaACGGTGCCAGGAAGCCACCGCTGGCAGCGTCGATGTGCATGTCGATGTCGATACCGGTATCGGCCTGGAATTTATCCAGCGCATCGAGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCTCCGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCTGGCAGCTCAACACCCCAGCAGCGGGCGACTTTATGCCCACCG‑‑‑ATTTGTACCGGa > 2:890290/1‑281 (MQ=11) gacgaacggtgccaggaagccaccgctggcagcgtcgatgtgcatgtcgatgtcgataccggtgtcggcctggaatttatccagcgcatcgtgcagcggttgtgggaactcatagttaccggtgcaggtcacgccgaaagtcggcaccacgccgctggtgttttagtcacaggcttaaatcatgcctttcgggttcataaacaactgaccggggcgcattgggatctcacgcagtccccccacccagtagcgggcaaatttgtgccagtcgtcttttaccg < 2:1306694‑M1/16‑14 (MQ=255) acgaacggtgccaggaagccaccgctggcagcgtcgatgtgcatgtcgatgtcgataccggtgtcggcctggaatttaaccagcgcatcgtgcagcggttgtgggaactcatagttaccggtgtaggtcacgccgaaagtcggcaccacgccgatggtgttttcgtcacaggctgcaatcatgcgtttcgggtcaataaacaactgaccggggctcatagggatctcacgcagctccacatcccagtagcgggcgaatttatgccctgtctcttatcccca < 1:867310‑M1/17‑17 (MQ=255) aGCCACCGCTGGCAGCGTCGATGTGCATGTCGATGTCGATACCGGTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAggttt > 2:685001/1‑281 (MQ=32) ccACCGCTGGCAGCGTCGATGTGCATGTCGATGTCGATACCGGTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTATCAGTGTAGGTAACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGAATAGGGATCTCACGCAGCTCCACATCCCAGTAACGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGAACACCAggttgggt > 1:402589/1‑282 (MQ=12) ccACCGCTGGCAGCGTCGATGTGCATGTCGATGTCGATACCGGTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGCTCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTAcctgtctcttatacctatctcct > 1:926524/1‑261 (MQ=255) gTCGATGTGCATGTCGATGTCGATACCGGTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCACAGGGATCTCACGCAGCTCCAACTCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGttt > 1:885262/1‑282 (MQ=17) cATGTCGATGTCGATACCGGTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAg > 2:405628/1‑281 (MQ=32) agttgggttggcatACCGGCAACTGCATCGAAGTTAGCCAGCGCATCGTGCAGTGGTTGTGGGCACTTATAGTTACGCGTGTAGGTCACGCCAAAAGGAGGCACCACGCCGAAGATCTTTGCGTCACAGGCTTCACTCATGCGGTTCGCGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCGTGCAG‑‑‑ATTGGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGc < 2:691847/269‑1 (MQ=11) caacggcgatACCGGTATGGGCGTTGAAGTTCTGCTGCGGATCGTGCAGCGTGTGTGGGACCTCTTATTTACCAGTTTATGGCACCACGAAAATCGGCACCTCTCGGATGGTGATTACGTCACAGGCTTCAATCATGCGCTTCGGAGCGATAAACAACTGACCGGGGAGCATAGGGATCTAAAGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCa < 2:745301/276‑1 (MQ=11) tgtcgatACCGGTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTCCCGGACCGCACACCCGGTTTGGTTTATCCGTTGGTTTTCCTTCACCTTCCCTa > 2:249000/1‑281 (MQ=12) ggTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGcc < 1:1180670/281‑1 (MQ=32) ggTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGGTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGcc < 1:890290/281‑1 (MQ=17) tATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTg > 1:174548/1‑214 (MQ=32) tCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGACACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGTGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTCTGTTTTTTCCGTTGGTTTGCCTGCAGc > 1:754337/1‑260 (MQ=9) ttATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGcc < 1:405628/282‑1 (MQ=31) aTCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCAt > 1:142121/1‑282 (MQ=31) gcgcATCGTGCAGCGGTTGTGGGAACTCATAGTTAACAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCCCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCTCACACCAGGTTTGGTTTTACCGTTGGTTTGCCTGCCGCTCCCATACGCTTGCTCCAACGCCCTTCCATcccctctcccc > 2:1565914/1‑275 (MQ=11) cgcATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGGCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCccgcc < 1:1247052/282‑1 (MQ=14) cttcggccAGCGGTTGTGGGAACGCAGAGTTACCAGTGTAGGGCACGCCGAAAGTCGGCACAAAGCCGATGGTTTTTTGGTACCAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCACAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACTCCATTTCATCGCCATCCCGCCGa < 2:885262/275‑1 (MQ=11) cGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGc < 2:89939/235‑1 (MQ=31) cGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGc > 1:89939/1‑235 (MQ=31) gCAGCGGTTGTGGGAACTCATTGTTACCAGTGGAGGTGACGCCGAAAGTCGGCCCCACGCTGATTGTTTTTTCGTCACAGGCTTCAATCCTGCGTTTCGGCTCCATAAACAACTGACCGGGGCGCATAGGGTTCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATa < 2:402589/281‑1 (MQ=11) gCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATa < 1:249000/281‑1 (MQ=31) gCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCCGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATa < 1:733016/281‑1 (MQ=14) aGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACTCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACa < 1:1565914/281‑1 (MQ=14) gtgGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCgg > 1:431034/1‑282 (MQ=31) gtgGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAACTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTAACCGTTGGTTTGCCTGCCGTTTCCAGAAGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGCGCATCCAGGACTCgg > 2:136285/1‑282 (MQ=255) gtgGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGACGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCCTACAGGCCTCgg > 1:1421972/1‑282 (MQ=14) ggAACTCATAGTTACCAGTGTAGGTCAGGCCGAAAGTCGGCACAACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGga < 1:1391920/280‑1 (MQ=14) cTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGCCGCATAGGGATCTCACGCAGCTCCACATCACAGTAGCGGGCGAATTTATGCCTGCAG‑‑‑CTTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCCTACCCTTGCGCCAACGCCCTTCCCTCGCCATACCGCCGAGCATACCGGCCCTGGACGAAcc > 2:751091/1‑282 (MQ=11) tCATCGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTCCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTTGTTTGCCTGCAGCTTCCATACGCTTGCGACAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGCACCa > 1:1402434/1‑282 (MQ=9) cATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCa < 1:685001/281‑1 (MQ=31) gtgtaggtcacgccgaaagtcggcaccacgccgatggtgttttcgtcacaggcttcaatcatgcgtttcgggtccataaacaactgaccggggcgcatagggatctcacgcagctccacatcccagtagcgggcgaatttatgcCAg > 2:1173098‑M1/145‑147 (MQ=255) gtgtaggtcacgccgaaagtcggcaccacgccgatggtgttttcgtcacaggcttcaatcatgcgtttcgggtccataaacaactgaccggggcgcatagggatctcacgcagctccacatcccagtagcgggcgaatttatgcCAg < 1:1173098‑M1/3‑1 (MQ=255) gtaggtcacgccgaaagtcggcaccacgccgatggtgttttcgtcacaggcttcaatcatgcgtttcgggtccataaacaactgaccggggcgcatagggatctcacgcagctccacatcccagtagcgggcgaatttatgcCAg < 2:1366589‑M1/3‑1 (MQ=255) gtaggtcacgccgaaagtcggcaccacgccgatggtgttttcgtcacaggcttcaatcatgcgtttcgggtccataaacaactgaccggggcgcatagggatctcacgcagctccacatcccagtagcgggcgaatttatgcCAg > 1:1366589‑M1/143‑145 (MQ=255) caccacgccgatggtgttttcgtcacaggcttcaatcatgcgtttcgggtccataaacaactgaccggggcgcatagggatctcacgcagctccacatcccagtagcgggcgaatttatgcCAG‑‑‑ATTTGTACCGGACCGCACCCCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCCTTTCATCGCCATCCCGCCGAGCATACAGGCCCCGGAAGAACCAATGGTGTGCGGGCCAACGGCCGGACCATTTTGCggcgc < 2:460709‑M1/161‑1 (MQ=255) tgcgtttcgggtccataaacaactgaccggggcgcatagggatctcacgcagctccacatcccagtagcgggcgaatttatgcCAGCAGAGTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCACTGGTGTTGTTTCCCACGGTCGTACCAtttttcggccccggcgcctgccacaatccggccaccnannttnccc < 2:1069777‑M1/199‑22 (MQ=255) cgggtccataaacaactgaccggggcgcatagggatctcacgcagctccacatcccagtagcgggcgaatttatgcCAg < 2:1349117‑M1/3‑1 (MQ=255) cgggtccataaacaactgaccggggcgcatagggatctcacgcagctccacatcccagtagcgggcgaatttatgcCAg > 1:1349117‑M1/77‑79 (MQ=255) actgaccggggcgcatatggatctcacgcagctccacatcccagtagcgggcgaatttatgcCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCGGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCtgcggatt > 1:460709‑M1/63‑282 (MQ=255) cccAGTAGCGGGCGAATTTATGCCAGTGA‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTa < 2:443885/281‑1 (MQ=14) cccAGGGGCGGGCGAATTTTTGCCAGCGG‑‑‑ATTTGCACCCGACCGCACCCCAGGTTTGGTTTATCCGTTGCGTTGCCTGCAGCTTCCAGACGCTTGCGCCACCGCCATTTCACCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTa < 2:711507/281‑1 (MQ=11) cAGTAGCGGGCGAATTTATGCCAGCCG‑‑‑ATATGTACCGGACCGCAAACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCACACCGCTGAGCATCCAGTCCTCGGGAGAACCACTGGTGTTGGTGCCAACGGCCCGATCTATTTTCGGCGCAGGCCCAACCAACCATTCGGCAACCATACTTACACCACGCTGGTAGCTGGCTACTGGTTGCGGCTACTCTTATTTGTCGCACCAGTTTGTGTTaagg > 2:642070/1‑280 (MQ=11) cAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTa < 1:312120/279‑1 (MQ=31) cAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTa > 2:312120/1‑279 (MQ=31) cAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAAt > 1:683943/1‑281 (MQ=32) aGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATg > 1:1520281/1‑281 (MQ=32) aGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGGTTTTGTTAATg > 1:443885/1‑281 (MQ=17) tggCGGGCGAATTTTTGCCAGCAG‑‑‑ATTGGTACCGGACCGACAACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGAt < 2:142121/280‑1 (MQ=16) tagttggCGAATTTATGCCCGCAT‑‑‑GTTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCCGCAGCTTCCATACGCTTGCCCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGTTCCAGTTTTTGTTAATGGAt < 1:880287/277‑1 (MQ=255) gCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGAt < 1:50199/280‑1 (MQ=33) ggCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGGCGATGGATGCGGATTGCGGATATTCTTCTTTGTCGACCCCGTTTTTGTTAATGGATCAATc > 2:20488/1‑282 (MQ=19) ggCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCAAGGATCGGCAACAATATTTACCCAACGCGGGGCGATGCGTGGGGCTTGCGGAGACCTTTTTTTGCCGATCCATTTTTTGTTTATggcaaactc > 2:477805/1‑275 (MQ=11) ggCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGAATGCCACAGATCGGCCACCATATTTACGCAACGCAGGTCGCTGGCTGCGGAGTGGGGATATTCTTTTTTTTCGGTCCAGTTTTTGTTATTGGGAAAAt > 2:50199/1‑281 (MQ=11) ggCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGCGTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCCTACAGGCCTCGGAAGAAACAATGGTGTTGGTGCCCACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCCACCAAATTTACGCAACGCCAGTCCATGGCTGCCGATTGCGGAAATTCTTCTTTGTCAATCCGCTTTTTGTTATAGGATAAATc > 2:2955/1‑282 (MQ=11) aatgtttGCCTGCAG‑‑‑ATTTGGACCTGACCCAACACCAGGTTTGTTTTATCCGTGGGTTAGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCGTCTCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTAACGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGTCTGCGGATTGCGGATATTCTTCGTTGTCGATCCAGTTTTTGTTAATGGATAAATCCAt < 2:397835/275‑1 (MQ=11) aTGCCAGCAG‑‑‑ATTTGTACCAGCCCGCACACCCGGGTTTGTTTACCCTTTGGTTTTCCCGCAGCTTCCCTACCCTTGCGCAAACGCCATTTCATCGCCATCCCACCGAGCATACAGGCCTCGCAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCCTACTTACGCAACGCATGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTCATGGATAAATCCATCAAttt < 2:325530/282‑1 (MQ=11) | ATCCGGGGCGACGAACGGTGCCAGGAAGCCACCGCTGGCAGCGTCGATGTGCATGTCGATGTCGATACCGGTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAATCCATCAATTT > NC_000913/1571275‑1571826 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |