New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1571552 =49 (0.330)3 (0.020) 3/474 NT 4.9% coding (494/1401 nt) gadB glutamate decarboxylase B, PLP‑dependent
?NC_000913 = 3667082 67 (0.450)coding (498/1401 nt) gadA glutamate decarboxylase A, PLP‑dependent

ATCCGGGGCGACGAACGGTGCCAGGAAGCCACCGCTGGCAGCGTCGATGTGCATGTCGATGTCGATACCGGTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAATCCATCAATTT  >  NC_000913/1571275‑1571826
                                                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                                     
gatatccggggcgacgaacggtgccaggaagccaccgctggcagcgtcgatgtgcatgtcgatgtcgataccggtgtcggcctggaatttatccagcgcatcgtgcagcggttgtgggaactcatagttaccggtgtaggtcacgccgaaagtcggcaccacgccgatggtgttttcgtcacaggcttcaatcatgcgtttcgggtccataaacaactgaccggggcgcatagggatctcacgcagctccacatcccagtagcgggcgaatttatgcCAg                                                                                                                                                                                                                                                                                     >  1:478797‑M1/278‑280 (MQ=255)
 cgcGGGGCGACGAAGGGGGACAGAAGTCAACCGCGAGCGGGGTAGAGGGGCGTGTCGATGTCGATACCGGTATCGGCCTGGAATTTATCCGGAGCATCGTGCAGCGGTTGTGGGAACGCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCAGGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑At                                                                                                                                                                                                                                                                                <  2:32039/279‑1 (MQ=11)
   cGGGGGGACGAACGGTGCCAGGAGACCACCGCGGGCAGTGTCGATGGTCATGTCGATGTGGGTACCGGTATCGGCCTGGAATTTATCCGGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTGCCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑At                                                                                                                                                                                                                                                                                <  2:408838/279‑1 (MQ=11)
         gacgaACGGTGCCAGGAAGCCACCGCTGGCAGCGTCGATGTGCATGTCGATGTCGATACCGGTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCgg                                                                                                                                                                                                                                                                       >  1:294526/1‑282 (MQ=32)
           cgaACGGTGCCAGGAAGCCACCGCTGGCAGCGTCGATGTGCATGTCGATGTCGATACCGGTATCGGCCTGGAATTTATCCAGCGCATCGAGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCTCCGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCTGGCAGCTCAACACCCCAGCAGCGGGCGACTTTATGCCCACCG‑‑‑ATTTGTACCGGa                                                                                                                                                                                                                                                                      >  2:890290/1‑281 (MQ=11)
            gacgaacggtgccaggaagccaccgctggcagcgtcgatgtgcatgtcgatgtcgataccggtgtcggcctggaatttatccagcgcatcgtgcagcggttgtgggaactcatagttaccggtgcaggtcacgccgaaagtcggcaccacgccgctggtgttttagtcacaggcttaaatcatgcctttcgggttcataaacaactgaccggggcgcattgggatctcacgcagtccccccacccagtagcgggcaaatttgtgccagtcgtcttttaccg                                                                                                                                                                                                                                                                        <  2:1306694‑M1/16‑14 (MQ=255)
             acgaacggtgccaggaagccaccgctggcagcgtcgatgtgcatgtcgatgtcgataccggtgtcggcctggaatttaaccagcgcatcgtgcagcggttgtgggaactcatagttaccggtgtaggtcacgccgaaagtcggcaccacgccgatggtgttttcgtcacaggctgcaatcatgcgtttcgggtcaataaacaactgaccggggctcatagggatctcacgcagctccacatcccagtagcgggcgaatttatgccctgtctcttatcccca                                                                                                                                                                                                                                                                       <  1:867310‑M1/17‑17 (MQ=255)
                          aGCCACCGCTGGCAGCGTCGATGTGCATGTCGATGTCGATACCGGTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAggttt                                                                                                                                                                                                                                                       >  2:685001/1‑281 (MQ=32)
                            ccACCGCTGGCAGCGTCGATGTGCATGTCGATGTCGATACCGGTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTATCAGTGTAGGTAACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGAATAGGGATCTCACGCAGCTCCACATCCCAGTAACGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGAACACCAggttgggt                                                                                                                                                                                                                                                    >  1:402589/1‑282 (MQ=12)
                            ccACCGCTGGCAGCGTCGATGTGCATGTCGATGTCGATACCGGTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGCTCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTAcctgtctcttatacctatctcct                                                                                                                                                                                                                                                    >  1:926524/1‑261 (MQ=255)
                                          gTCGATGTGCATGTCGATGTCGATACCGGTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCACAGGGATCTCACGCAGCTCCAACTCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGttt                                                                                                                                                                                                                                      >  1:885262/1‑282 (MQ=17)
                                                   cATGTCGATGTCGATACCGGTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAg                                                                                                                                                                                                                              >  2:405628/1‑281 (MQ=32)
                                                    agttgggttggcatACCGGCAACTGCATCGAAGTTAGCCAGCGCATCGTGCAGTGGTTGTGGGCACTTATAGTTACGCGTGTAGGTCACGCCAAAAGGAGGCACCACGCCGAAGATCTTTGCGTCACAGGCTTCACTCATGCGGTTCGCGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCGTGCAG‑‑‑ATTGGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGc                                                                                                                                                                                                                             <  2:691847/269‑1 (MQ=11)
                                                        caacggcgatACCGGTATGGGCGTTGAAGTTCTGCTGCGGATCGTGCAGCGTGTGTGGGACCTCTTATTTACCAGTTTATGGCACCACGAAAATCGGCACCTCTCGGATGGTGATTACGTCACAGGCTTCAATCATGCGCTTCGGAGCGATAAACAACTGACCGGGGAGCATAGGGATCTAAAGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCa                                                                                                                                                                                                                        <  2:745301/276‑1 (MQ=11)
                                                           tgtcgatACCGGTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTCCCGGACCGCACACCCGGTTTGGTTTATCCGTTGGTTTTCCTTCACCTTCCCTa                                                                                                                                                                                                                      >  2:249000/1‑281 (MQ=12)
                                                                     ggTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGcc                                                                                                                                                                                                            <  1:1180670/281‑1 (MQ=32)
                                                                     ggTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGGTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGcc                                                                                                                                                                                                            <  1:890290/281‑1 (MQ=17)
                                                                       tATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTg                                                                                                                                                                                                                                                                             >  1:174548/1‑214 (MQ=32)
                                                                         tCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGACACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGTGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTCTGTTTTTTCCGTTGGTTTGCCTGCAGc                                                                                                                                                                                                                             >  1:754337/1‑260 (MQ=9)
                                                                                     ttATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGcc                                                                                                                                                                                           <  1:405628/282‑1 (MQ=31)
                                                                                       aTCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCAt                                                                                                                                                                                         >  1:142121/1‑282 (MQ=31)
                                                                                            gcgcATCGTGCAGCGGTTGTGGGAACTCATAGTTAACAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCCCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCTCACACCAGGTTTGGTTTTACCGTTGGTTTGCCTGCCGCTCCCATACGCTTGCTCCAACGCCCTTCCATcccctctcccc                                                                                                                                                                                    >  2:1565914/1‑275 (MQ=11)
                                                                                             cgcATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGGCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCccgcc                                                                                                                                                                                   <  1:1247052/282‑1 (MQ=14)
                                                                                               cttcggccAGCGGTTGTGGGAACGCAGAGTTACCAGTGTAGGGCACGCCGAAAGTCGGCACAAAGCCGATGGTTTTTTGGTACCAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCACAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACTCCATTTCATCGCCATCCCGCCGa                                                                                                                                                                                 <  2:885262/275‑1 (MQ=11)
                                                                                                  cGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGc                                                                                                                                                                                                                             <  2:89939/235‑1 (MQ=31)
                                                                                                  cGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGc                                                                                                                                                                                                                             >  1:89939/1‑235 (MQ=31)
                                                                                                     gCAGCGGTTGTGGGAACTCATTGTTACCAGTGGAGGTGACGCCGAAAGTCGGCCCCACGCTGATTGTTTTTTCGTCACAGGCTTCAATCCTGCGTTTCGGCTCCATAAACAACTGACCGGGGCGCATAGGGTTCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATa                                                                                                                                                                            <  2:402589/281‑1 (MQ=11)
                                                                                                     gCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATa                                                                                                                                                                            <  1:249000/281‑1 (MQ=31)
                                                                                                     gCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCCGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATa                                                                                                                                                                            <  1:733016/281‑1 (MQ=14)
                                                                                                       aGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACTCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACa                                                                                                                                                                          <  1:1565914/281‑1 (MQ=14)
                                                                                                              gtgGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCgg                                                                                                                                                                  >  1:431034/1‑282 (MQ=31)
                                                                                                              gtgGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAACTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTAACCGTTGGTTTGCCTGCCGTTTCCAGAAGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGCGCATCCAGGACTCgg                                                                                                                                                                  >  2:136285/1‑282 (MQ=255)
                                                                                                              gtgGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGACGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCCTACAGGCCTCgg                                                                                                                                                                  >  1:1421972/1‑282 (MQ=14)
                                                                                                                 ggAACTCATAGTTACCAGTGTAGGTCAGGCCGAAAGTCGGCACAACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGga                                                                                                                                                                 <  1:1391920/280‑1 (MQ=14)
                                                                                                                     cTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGCCGCATAGGGATCTCACGCAGCTCCACATCACAGTAGCGGGCGAATTTATGCCTGCAG‑‑‑CTTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCCTACCCTTGCGCCAACGCCCTTCCCTCGCCATACCGCCGAGCATACCGGCCCTGGACGAAcc                                                                                                                                                           >  2:751091/1‑282 (MQ=11)
                                                                                                                      tCATCGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTCCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTTGTTTGCCTGCAGCTTCCATACGCTTGCGACAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGCACCa                                                                                                                                                          >  1:1402434/1‑282 (MQ=9)
                                                                                                                       cATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCa                                                                                                                                                          <  1:685001/281‑1 (MQ=31)
                                                                                                                                     gtgtaggtcacgccgaaagtcggcaccacgccgatggtgttttcgtcacaggcttcaatcatgcgtttcgggtccataaacaactgaccggggcgcatagggatctcacgcagctccacatcccagtagcgggcgaatttatgcCAg                                                                                                                                                                                                                                                                                     >  2:1173098‑M1/145‑147 (MQ=255)
                                                                                                                                     gtgtaggtcacgccgaaagtcggcaccacgccgatggtgttttcgtcacaggcttcaatcatgcgtttcgggtccataaacaactgaccggggcgcatagggatctcacgcagctccacatcccagtagcgggcgaatttatgcCAg                                                                                                                                                                                                                                                                                     <  1:1173098‑M1/3‑1 (MQ=255)
                                                                                                                                       gtaggtcacgccgaaagtcggcaccacgccgatggtgttttcgtcacaggcttcaatcatgcgtttcgggtccataaacaactgaccggggcgcatagggatctcacgcagctccacatcccagtagcgggcgaatttatgcCAg                                                                                                                                                                                                                                                                                     <  2:1366589‑M1/3‑1 (MQ=255)
                                                                                                                                       gtaggtcacgccgaaagtcggcaccacgccgatggtgttttcgtcacaggcttcaatcatgcgtttcgggtccataaacaactgaccggggcgcatagggatctcacgcagctccacatcccagtagcgggcgaatttatgcCAg                                                                                                                                                                                                                                                                                     >  1:1366589‑M1/143‑145 (MQ=255)
                                                                                                                                                            caccacgccgatggtgttttcgtcacaggcttcaatcatgcgtttcgggtccataaacaactgaccggggcgcatagggatctcacgcagctccacatcccagtagcgggcgaatttatgcCAG‑‑‑ATTTGTACCGGACCGCACCCCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCCTTTCATCGCCATCCCGCCGAGCATACAGGCCCCGGAAGAACCAATGGTGTGCGGGCCAACGGCCGGACCATTTTGCggcgc                                                                                                                    <  2:460709‑M1/161‑1 (MQ=255)
                                                                                                                                                                                                  tgcgtttcgggtccataaacaactgaccggggcgcatagggatctcacgcagctccacatcccagtagcgggcgaatttatgcCAGCAGAGTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCACTGGTGTTGTTTCCCACGGTCGTACCAtttttcggccccggcgcctgccacaatccggccaccnannttnccc                                                                                 <  2:1069777‑M1/199‑22 (MQ=255)
                                                                                                                                                                                                         cgggtccataaacaactgaccggggcgcatagggatctcacgcagctccacatcccagtagcgggcgaatttatgcCAg                                                                                                                                                                                                                                                                                     <  2:1349117‑M1/3‑1 (MQ=255)
                                                                                                                                                                                                         cgggtccataaacaactgaccggggcgcatagggatctcacgcagctccacatcccagtagcgggcgaatttatgcCAg                                                                                                                                                                                                                                                                                     >  1:1349117‑M1/77‑79 (MQ=255)
                                                                                                                                                                                                                       actgaccggggcgcatatggatctcacgcagctccacatcccagtagcgggcgaatttatgcCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCGGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCtgcggatt                                                         >  1:460709‑M1/63‑282 (MQ=255)
                                                                                                                                                                                                                                                           cccAGTAGCGGGCGAATTTATGCCAGTGA‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTa                      <  2:443885/281‑1 (MQ=14)
                                                                                                                                                                                                                                                           cccAGGGGCGGGCGAATTTTTGCCAGCGG‑‑‑ATTTGCACCCGACCGCACCCCAGGTTTGGTTTATCCGTTGCGTTGCCTGCAGCTTCCAGACGCTTGCGCCACCGCCATTTCACCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTa                      <  2:711507/281‑1 (MQ=11)
                                                                                                                                                                                                                                                             cAGTAGCGGGCGAATTTATGCCAGCCG‑‑‑ATATGTACCGGACCGCAAACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCACACCGCTGAGCATCCAGTCCTCGGGAGAACCACTGGTGTTGGTGCCAACGGCCCGATCTATTTTCGGCGCAGGCCCAACCAACCATTCGGCAACCATACTTACACCACGCTGGTAGCTGGCTACTGGTTGCGGCTACTCTTATTTGTCGCACCAGTTTGTGTTaagg                   >  2:642070/1‑280 (MQ=11)
                                                                                                                                                                                                                                                             cAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTa                      <  1:312120/279‑1 (MQ=31)
                                                                                                                                                                                                                                                             cAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTa                      >  2:312120/1‑279 (MQ=31)
                                                                                                                                                                                                                                                             cAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAAt                    >  1:683943/1‑281 (MQ=32)
                                                                                                                                                                                                                                                              aGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATg                   >  1:1520281/1‑281 (MQ=32)
                                                                                                                                                                                                                                                              aGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGGTTTTGTTAATg                   >  1:443885/1‑281 (MQ=17)
                                                                                                                                                                                                                                                                tggCGGGCGAATTTTTGCCAGCAG‑‑‑ATTGGTACCGGACCGACAACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGAt                <  2:142121/280‑1 (MQ=16)
                                                                                                                                                                                                                                                                tagttggCGAATTTATGCCCGCAT‑‑‑GTTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCCGCAGCTTCCATACGCTTGCCCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGTTCCAGTTTTTGTTAATGGAt                <  1:880287/277‑1 (MQ=255)
                                                                                                                                                                                                                                                                  gCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGAt                <  1:50199/280‑1 (MQ=33)
                                                                                                                                                                                                                                                                     ggCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGGCGATGGATGCGGATTGCGGATATTCTTCTTTGTCGACCCCGTTTTTGTTAATGGATCAATc           >  2:20488/1‑282 (MQ=19)
                                                                                                                                                                                                                                                                     ggCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCAAGGATCGGCAACAATATTTACCCAACGCGGGGCGATGCGTGGGGCTTGCGGAGACCTTTTTTTGCCGATCCATTTTTTGTTTATggcaaactc           >  2:477805/1‑275 (MQ=11)
                                                                                                                                                                                                                                                                     ggCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGAATGCCACAGATCGGCCACCATATTTACGCAACGCAGGTCGCTGGCTGCGGAGTGGGGATATTCTTTTTTTTCGGTCCAGTTTTTGTTATTGGGAAAAt            >  2:50199/1‑281 (MQ=11)
                                                                                                                                                                                                                                                                     ggCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGCGTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCCTACAGGCCTCGGAAGAAACAATGGTGTTGGTGCCCACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCCACCAAATTTACGCAACGCCAGTCCATGGCTGCCGATTGCGGAAATTCTTCTTTGTCAATCCGCTTTTTGTTATAGGATAAATc           >  2:2955/1‑282 (MQ=11)
                                                                                                                                                                                                                                                                         aatgtttGCCTGCAG‑‑‑ATTTGGACCTGACCCAACACCAGGTTTGTTTTATCCGTGGGTTAGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCGTCTCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTAACGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGTCTGCGGATTGCGGATATTCTTCGTTGTCGATCCAGTTTTTGTTAATGGATAAATCCAt        <  2:397835/275‑1 (MQ=11)
                                                                                                                                                                                                                                                                              aTGCCAGCAG‑‑‑ATTTGTACCAGCCCGCACACCCGGGTTTGTTTACCCTTTGGTTTTCCCGCAGCTTCCCTACCCTTGCGCAAACGCCATTTCATCGCCATCCCACCGAGCATACAGGCCTCGCAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCCTACTTACGCAACGCATGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTCATGGATAAATCCATCAAttt  <  2:325530/282‑1 (MQ=11)
                                                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                                     
ATCCGGGGCGACGAACGGTGCCAGGAAGCCACCGCTGGCAGCGTCGATGTGCATGTCGATGTCGATACCGGTATCGGCCTGGAATTTATCCAGCGCATCGTGCAGCGGTTGTGGGAACTCATAGTTACCAGTGTAGGTCACGCCGAAAGTCGGCACCACGCCGATGGTGTTTTCGTCACAGGCTTCAATCATGCGTTTCGGGTCCATAAACAACTGACCGGGGCGCATAGGGATCTCACGCAGCTCCACATCCCAGTAGCGGGCGAATTTATGCCAGCAG‑‑‑ATTTGTACCGGACCGCACACCAGGTTTGGTTTATCCGTTGGTTTGCCTGCAGCTTCCATACGCTTGCGCCAACGCCATTTCATCGCCATCCCGCCGAGCATACAGGCCTCGGAAGAACCAATGGTGTTGGTGCCAACGGCCTGACCATTTTTCGGCGCAGGCGCATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAATCCATCAATTT  >  NC_000913/1571275‑1571826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.