BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009273	2,420,353	A→C	intergenic (‑86/+135)	hisJ ← / ← argT	histidine/lysine/arginine/ornithine transporter subunit/lysine/arginine/ornithine transporter subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	2,420,353	0	A	C	100.0%	319.5 / NA	101	intergenic (‑86/+135)	hisJ/argT	histidine/lysine/arginine/ornithine transporter subunit/lysine/arginine/ornithine transporter subunit
Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (49/52); total (49/52)

Only 100 of 101 total aligned reads displayed.

CCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGT  >  CP009273/2420210‑2420498

gcgcAGTTGCGCTGGGGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATc                                                                                                                                              <  1:704796/148‑1 (MQ=255)

ccgcAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATc                                                                                                                                              <  1:1103645/149‑1 (MQ=255)

 cgcAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATTGTGCCATAGAATTGAACATCAAAGCAACAtctca                                                                                                                                             >  1:1472259/1‑148 (MQ=255)

  gcAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACGCTTATCGTGCCATAAGATTGACCATCAAGGCAACATATccc                                                                                                                                            >  1:210223/1‑149 (MQ=255)

  gcAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATccc                                                                                                                                            >  2:493228/1‑149 (MQ=255)

   cAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGACAACATAGCCCg                                                                                                                                           <  1:840088/149‑1 (MQ=255)

       tGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGACTATTTCCATGGTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGcccc                                                                                                                                       <  2:1134306/149‑1 (MQ=255)

       tGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATCTTTCCAGTTTGGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGcccc                                                                                                                                       <  2:1134315/149‑1 (MQ=255)

       tGCACTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGcccc                                                                                                                                       <  1:1479499/149‑1 (MQ=255)

             ggggaAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATCTCCCTCTGCGTTAGa                                                                                                                                 <  1:1015229/146‑1 (MQ=255)

             ggAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCACCATAGTCTGCCCCGTTAGa                                                                                                                                 <  1:1015106/149‑1 (MQ=255)

              gagaAGGCCAGAACCAGCGAGAGTGATAGCACCAGTTTTTTCATAATGTCCTCAACCGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGGGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGAc                                                                                                                                <  1:996125/149‑1 (MQ=255)

              gagaAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAACATTGACCATCAAGGCAACATATCCCGCCCCGTTAGAc                                                                                                                                >  2:1115470/1‑149 (MQ=255)

                gaAGGCCAGAACCAGAGAGGGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTGGTCGt                                                                                                                              <  1:198812/149‑1 (MQ=255)

                   ggCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTTTTTTTTTTTTCAACTGACAGTCTTTTTATAGGGATTATTTACAGGTTTGTTACACTTATCGTGGCATACAATTGACCATCCAGGCACCATATCCCGCCCCGTTGGACGtatt                                                                                                                           >  1:317169/1‑149 (MQ=255)

                   ggCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGCACATCAAGGCCACGTATCCCGCCCCGATAGAccgatt                                                                                                                           >  1:1033361/1‑144 (MQ=255)

                      cAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTattatt                                                                                                                        >  2:1189712/1‑149 (MQ=255)

                       aGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTAttt                                                                                                                       >  1:1224184/1‑149 (MQ=255)

                         aagcAGAGAGAGCGATAGCACCAGTTTTTGCATAATGTCCTCAAGTGACAGTCTTTTTCGAGGGAATATTTACAGGTTTGTTACACTTCTCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTAttttt                                                                                                                     <  2:1451482/146‑1 (MQ=255)

                          aCCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCACCATAGCCCGCCCCGTTAGACGTATTATTTTTc                                                                                                                    <  2:1263591/149‑1 (MQ=255)

                          aCCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTc                                                                                                                    <  1:1079133/149‑1 (MQ=255)

                           ccAGGGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCa                                                                                                                   <  2:1307454/149‑1 (MQ=255)

                                     ggtgaccACCAGGTTTTTCATAAGGTCCTCACTCGACGGGCTTTTTATAGTGAATATTTACAGGTTTGTTACACGTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGc                                                                                                         <  1:783389/143‑1 (MQ=255)

                                       aTAGCATCAGTTCTTTCATAATGTCCTCGACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTg                                                                                                       <  1:373639‑M1/149‑2 (MQ=255)

                                       aTAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTGGACGTATTATTTTTCATTAAAAATGCTg                                                                                                       >  2:842088‑M1/1‑148 (MQ=255)

                                           cACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtga                                                                                                   >  2:471930‑M1/1‑144 (MQ=255)

                                            aCCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTGTAGGGAATATTTACAGGTTTGTTAGACTTATCGTGCTATGAAATTGATCATAAAGGCAACATATCCCGTTCCGTTATACGTATTATTTTTCATTAAAAATGCTggtgct                                                                                                  >  1:742530‑M1/1‑143 (MQ=255)

                                             ccAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatg                                                                                                 >  2:654943‑M1/1‑142 (MQ=255)

                                              cAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACTGGTTTGTTACTCTTATCGTGCCATAAGATTGACCATTATGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgc                                                                                                <  2:105109‑M1/149‑9 (MQ=255)

                                              cAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATACAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATACTggtgacgc                                                                                                >  1:1641887‑M1/1‑141 (MQ=255)

                                              cAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgc                                                                                                >  2:746184‑M1/1‑141 (MQ=255)

                                              cAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgc                                                                                                >  2:686456‑M1/1‑141 (MQ=255)

                                              cAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgc                                                                                                >  2:661041‑M1/1‑141 (MQ=255)

                                              cAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgc                                                                                                >  1:472719‑M1/1‑141 (MQ=255)

                                              cAGTTTTTGCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgc                                                                                                >  1:522993‑M1/1‑141 (MQ=255)

                                               aGTTTTTGCATATTCTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATAAAAAAAAAAAAAAAATGCTggtgatgct                                                                                               <  1:1621554‑M1/149‑10 (MQ=255)

                                                 ttttttCATAATGTCCTCAACTGACAGTCTTTTTATAGTGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCAGCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgc                                                                                             <  2:552179‑M1/149‑12 (MQ=255)

                                                  tttttCATAATGCCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGTCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgcc                                                                                            <  2:1137883‑M1/149‑13 (MQ=255)

                                                   ttttCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggttatgctgcca                                                                                           >  2:857217‑M1/1‑136 (MQ=255)

                                                   ttttCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgcca                                                                                           >  2:1644373‑M1/1‑136 (MQ=255)

                                                    tttCATAATGTCCTCAACTGACAGTCTTTTTATAGTGCTTATTTTCAGGTTTGTTACACTTATCGTGCCATAAAATTGTCCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaa                                                                                          <  2:746501‑M1/149‑15 (MQ=255)

                                                    tttCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgctaa                                                                                          >  1:312036‑M1/1‑135 (MQ=255)

                                                     ttCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTGTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaac                                                                                         <  1:493228‑M1/149‑16 (MQ=255)

                                                      tCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaact                                                                                        <  2:1446483‑M1/149‑17 (MQ=255)

                                                        ctcatgtCCTCGACTGACAGTCTTTTTATAGGGCATACTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaactta                                                                                      <  1:250386‑M1/146‑19 (MQ=255)

                                                          aaTGTCCTCAACTGACAGTCTTTTTATTGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACTATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttact                                                                                    <  2:1148899‑M1/149‑21 (MQ=255)

                                                          aaTGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCCTTAAAAATGCTggtgatgctgccaacttact                                                                                    >  2:500859‑M1/1‑129 (MQ=255)

                                                           aTGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttcctg                                                                                   >  1:944251‑M1/1‑128 (MQ=255)

                                                           aTGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactg                                                                                   >  2:569269‑M1/1‑128 (MQ=255)

                                                                cacaaCTGACAGTCGTTTTATAGGGAATATTTACAGGTCTGTTACCCTTATCGGGCCATAAAACTGACCATCAAGGCAACATATCCCGCCCCGTTATACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgattta                                                                              <  1:485108‑M1/147‑27 (MQ=255)

                                                                cTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCAACAAGGCAACATATCCCGCCCCGATAGACGTATTATTTTTCATTAAAAATGCTggtgacgctgccaacctactgactca                                                                              >  1:236137‑M1/1‑123 (MQ=255)

                                                                 tCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttag                                                                             >  1:1250157‑M1/1‑122 (MQ=255)

                                                                 tCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTACCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttag                                                                             >  2:1179450‑M1/1‑122 (MQ=255)

                                                                  cAACTGACTGTCTTTTTATAGGTAGTATTTTCAGGTTTGTTACACTTATCGTGCCATAATATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagt                                                                            <  2:275548‑M1/149‑29 (MQ=255)

                                                                  cAACTGACAGTCTTTTTATAGGGAATATTTACAGTTTTGTTACACTTATCGTGCTATAAAATTGACCATCAAGGCAACATATCCCGACCCGTTAGATGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagt                                                                            <  2:1300947‑M1/149‑29 (MQ=255)

                                                                        aCAGTATTTTTAGAGGGAATATTTACAGGTTTGTTACCCTTATCGTGCCATAAAATTGACCATCAAGGCAACAAATACCGCTCCGTTGTTCGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatga                                                                      <  1:1495994‑M1/149‑35 (MQ=255)

                                                                          aGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCCAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaactcactgatttagtgtattatg                                                                    >  2:535289‑M1/1‑113 (MQ=255)

                                                                          aGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatg                                                                    <  2:1583093‑M1/149‑37 (MQ=255)

                                                                          aGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatg                                                                    <  1:1321026‑M1/149‑37 (MQ=255)

                                                                          aGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatg                                                                    <  1:438580‑M1/149‑37 (MQ=255)

                                                                            tCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggt                                                                  >  2:1101069‑M1/1‑111 (MQ=255)

                                                                            tCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTCGGACGTATTATATTGCATGAAAAATGCTggtgatacagccaacttactgatttagtgtatgatggt                                                                  >  1:1407408‑M1/1‑111 (MQ=255)

                                                                               ttttATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtt                                                               >  2:1583692‑M1/1‑108 (MQ=255)

                                                                                    tatgaaatatgtACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttga                                                          <  1:654943‑M1/144‑47 (MQ=255)

                                                                                    taGGGAATATTTACAGGTTTGTTACACGTAGCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttga                                                          <  1:1616086‑M1/149‑47 (MQ=255)

                                                                                     aGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag                                                         <  2:184453‑M1/149‑48 (MQ=255)

                                                                                     aGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgacgctgccaacttactgatttagtgtatgatggtgtttttgag                                                         <  2:742530‑M1/149‑48 (MQ=255)

                                                                                      gggAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg                                                        <  2:739251‑M1/149‑49 (MQ=255)

                                                                                      gggAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAAATGACCATCAAGGCAGCATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccagcttactgctttagtgtatgagggtgtttttgagg                                                        >  1:8882‑M1/1‑101 (MQ=255)

                                                                                       ggAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTACAAATGCTggtgatgctgccaacttactgatttagtgtgtgatggtgtttttgatgt                                                       >  1:1187087‑M1/1‑100 (MQ=255)

                                                                                       ggAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggt                                                       >  1:1001766‑M1/1‑100 (MQ=255)

                                                                                         catattCTCAGGATTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATGAAAAATGCTggtgatgctgccaacttactgatttagattatgagggtgtttttgaggtgc                                                     >  1:283886‑M1/2‑98 (MQ=255)

                                                                                         aaTATTTACAGGTTTGTTACACTTATCGTGCCATAAAATGTACCATCAAGGCAACCTATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgc                                                     <  2:135972‑M1/149‑52 (MQ=255)

                                                                                          atatTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgct                                                    <  1:1101069‑M1/149‑53 (MQ=255)

                                                                                           tttttacAGGGCTGTGTCACTTATCGTGCCATAAATTGGACCATCAAGGTAACATAGCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacgtactgatttagtgtatgatggtgtttttgaggtgctc                                                   <  2:758405‑M1/147‑54 (MQ=255)

                                                                                           tatTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCTACATTTCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctc                                                   <  2:132678‑M1/149‑54 (MQ=255)

                                                                                             tttACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATGCCTCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcca                                                 >  2:1551980‑M1/1‑94 (MQ=255)

                                                                                                    gTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt                                          >  1:638711‑M1/1‑87 (MQ=255)

                                                                                                     tttGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttc                                         <  1:471930‑M1/149‑64 (MQ=255)

                                                                                                         ttACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt                                     >  2:895077‑M1/1‑82 (MQ=255)

                                                                                                         ttACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt                                     >  2:276300‑M1/1‑82 (MQ=255)

                                                                                                         ttACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt                                     >  1:1343958‑M1/1‑82 (MQ=255)

                                                                                                           acacTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttc                                   <  2:1255848‑M1/149‑70 (MQ=255)

                                                                                                             acTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtgtcttctgtttctg                                 >  1:909388‑M1/1‑78 (MQ=255)

                                                                                                              cTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggggatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctat                                <  2:1456973‑M1/149‑73 (MQ=255)

                                                                                                              cTTATCGTCCCATAAAATTGACCACCAAGGCAACATATCCCGCCCCTTTAGACGTATTATTTTTCATTAAACATTCTggtgatgccgccaacttccttgtttattgtatgatggtgtttttgaggtgctccagtggcttctgtttctat                                <  1:686456‑M1/149‑73 (MQ=255)

                                                                                                               ttATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatc                               <  1:1189712‑M1/149‑74 (MQ=255)

                                                                                                               ttATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatc                               >  2:1199121‑M1/1‑76 (MQ=255)

                                                                                                               ttATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatc                               >  1:1612388‑M1/1‑76 (MQ=255)

                                                                                                               ggatcGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatc                               <  1:817401‑M1/147‑74 (MQ=255)

                                                                                                                     tGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgt                         <  1:1514061‑M1/149‑80 (MQ=255)

                                                                                                                          tAAAATTGACACTCAAGGCAACAAACCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctc                    <  1:842088‑M1/149‑85 (MQ=255)

                                                                                                                               ttGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtt               <  2:1080584‑M1/149‑90 (MQ=255)

                                                                                                                                 gACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttcgtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttca             <  1:296710‑M1/149‑92 (MQ=255)

                                                                                                                                     aTCAAGGCCACATATCCCGCCCCGTTAGCCGTATTATTTTTCATTAAAAATGCTggtgatgctgcacacttacagatttagtgtatgatgttgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagcta         >  2:1458604‑M1/1‑54 (MQ=255)

                                                                                                                                     aTCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTACCTCGAAATGCAgataatgcaaccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagcta         >  2:1625382‑M1/1‑54 (MQ=255)

                                                                                                                                         aGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactga     >  2:1445828‑M1/1‑50 (MQ=255)

                                                                                                                                          ggCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgac    >  1:450962‑M1/1‑49 (MQ=255)

                                                                                                                                          ggCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgac    >  2:22992‑M1/1‑49 (MQ=255)

                                                                                                                                            cAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttgctatcagctgtccctcctgttcagctactcacgg  >  2:2723‑M1/1‑47 (MQ=255)

CCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGT  >  CP009273/2420210‑2420498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`