Predicted mutation
evidence seq id position mutation annotation gene description
MC JC CP009273 4,145,501 Δ320 bp coding (573‑892/1005 nt) argC → N‑acetyl‑gamma‑glutamylphosphate reductase, NAD(P)‑binding

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP009273 4145501 4145820 320 107 [0] [2] 108 argC N‑acetyl‑gamma‑glutamylphosphate reductase, NAD(P)‑binding

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 41455000 (0.000)100 (1.040) 72/282 0.2 100% coding (572/1005 nt) argC N‑acetyl‑gamma‑glutamylphosphate reductase, NAD(P)‑binding
?CP009273 4145821 = 0 (0.000)coding (893/1005 nt) argC N‑acetyl‑gamma‑glutamylphosphate reductase, NAD(P)‑binding

Only 100 of 108 total aligned reads displayed.

TCGGGTGTGACCCAGGCGCAAGTCGCGCAAGTGTTACAGCAGGCGTATGCCCATAAACCGCTGGTGCGGCTGTATGACAAAGGCGTTCCGGCGCTGAAAAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGAATCCATTAATTATCAAACTGG  >  CP009273/4145673‑4145968
                                                                                                                                                    |                                                                                                                                                   
aattaaaagcagcgaatttgattgcggtgccgggctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcga                                                                                                                                                     <  2:272084‑M2/1‑1 (MQ=255)
  ttaaaagaagcgaatttgattgcggtgccgggctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagcgcgAGc                                                                                                                                                   >  1:810157‑M2/147‑149 (MQ=255)
      aagaagcgaatttgattgcggtgccgggctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgggagcggtgcagggcgAGCATCt                                                                                                                                               >  2:1387572‑M2/143‑149 (MQ=255)
        gaagcgaatttgattgcggtgccgggctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGa                                                                                                                                             <  2:669358‑M2/9‑1 (MQ=255)
        gaagcgaatttgattgcggtgccgggctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGa                                                                                                                                             <  1:1125081‑M2/9‑1 (MQ=255)
         aagcgaatttgattgcggtgccgggctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGat                                                                                                                                            >  1:1126437‑M2/140‑149 (MQ=255)
           gcgaatttgattgcggtgccgggatgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgaccttaatcagtggccgatgatcaacgccaccagcggcgggagcggtgcagggcgAGCATCtgatga                                                                                                                                          >  1:1131495‑M2/138‑147 (MQ=255)
             gaatgggattgcggtgccgggtgggtagccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctccatcagtggccggtgattaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGattatt                                                                                                                                        <  2:975346‑M2/14‑1 (MQ=255)
                tttgatggcggtgccgggctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATtgtg                                                                                                                                     <  1:1523586‑M2/17‑1 (MQ=255)
                         ggtgccgggctgttatccgagggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGaa                                                                                                                            <  1:249260‑M2/26‑1 (MQ=255)
                          gtgccgggctgttatccgacggcggcacagctggcgcgaaaaccgttgattgatgccgatcttatagacctcaatcagtggtcggtgatcaacgccaccagcgacgtgggcggtccagggcgGGCGTCTGATTATTGTggcgacggtag                                                                                                                           >  1:1495515‑M2/123‑144 (MQ=255)
                           tgccgggctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGa                                                                                                                          <  2:241154‑M2/28‑1 (MQ=255)
                              cgggctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACaa                                                                                                                       >  2:580588‑M2/119‑149 (MQ=255)
                               gggctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGGCAAc                                                                                                                      >  2:1413466‑M2/118‑149 (MQ=255)
                                ggctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACt                                                                                                                     >  1:1348391‑M2/117‑149 (MQ=255)
                                  ctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTa                                                                                                                   <  2:1271412‑M2/35‑1 (MQ=255)
                                    gttatccgacggcagcacagcgggcgctgaaaccgttgattgatgccgatcttctagacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACt                                                                                                                 >  2:1165885‑M2/113‑149 (MQ=255)
                                        tccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGaaa                                                                                                             <  2:1405267‑M2/41‑1 (MQ=255)
                                          cgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAgg                                                                                                           <  1:296757‑M2/43‑1 (MQ=255)
                                           gacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcatgcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAGGgc                                                                                                          >  2:56041‑M2/106‑149 (MQ=255)
                                            acggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgcgaccagcggcgtgagcggtgcagggcgGGCAACTGAGTAGTGCGGCGCCCGAAGGAAACGTACGGAgaggtg                                                                                                         >  1:46809‑M2/105‑147 (MQ=255)
                                            acggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGgcg                                                                                                         >  1:815052‑M2/105‑149 (MQ=255)
                                             cggcggcacagctggcgctgaaaccgttgattgatgccgatctgctcggactccaccagtggccttatatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGgcgc                                                                                                        <  2:631219‑M2/46‑1 (MQ=255)
                                              ggcgtgacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGcgcg                                                                                                       <  1:1200771‑M2/47‑1 (MQ=255)
                                              ggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGcgcg                                                                                                       >  2:1521247‑M2/103‑149 (MQ=255)
                                               gcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCgcgg                                                                                                      <  2:1065516‑M2/48‑1 (MQ=255)
                                                  gcacagctggcggggaaaccgttgagtgatgccggtcttcttgagctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGCCCTAAGACAACTTACTGAAAGGCGcggcgg                                                                                                   <  1:600076‑M2/51‑1 (MQ=255)
                                                   cacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccccccgcggcgtgagcggtccagggctGGCATCTAATTCTTGTGGGGACCAAGGACAACTTGCGGAAAgcggcggcggg                                                                                                  >  1:1412418‑M2/98‑148 (MQ=255)
                                                   cacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCggcggc                                                                                                  >  1:589087‑M2/98‑149 (MQ=255)
                                                    acagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGca                                                                                                 >  2:1594474‑M2/97‑149 (MQ=255)
                                                        ctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAg                                                                                             <  1:1375897‑M2/57‑1 (MQ=255)
                                                          ggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCg                                                                                           >  1:1037040‑M2/91‑149 (MQ=255)
                                                           gcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCgg                                                                                          >  1:316877‑M2/90‑149 (MQ=255)
                                                            cgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACGGAAGACAACTTACTGAAAGGCGcggcggcgcagcgggt                                                                                         >  1:658333‑M2/89‑143 (MQ=255)
                                                                    ccggtgattgatgccgatcgtcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTgcg                                                                                 <  1:388113‑M2/69‑1 (MQ=255)
                                                                     cgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTgcgc                                                                                <  2:1376635‑M2/70‑1 (MQ=255)
                                                                       ttgattgatgccgatcttcttgccctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCa                                                                              <  1:189719‑M2/72‑1 (MQ=255)
                                                                       ttgattgatgccgatcttcttgacctcaatcagtggccggtggtcaacgccgccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACACGCGGTACAGTGCGCCa                                                                              >  1:396969‑M2/78‑149 (MQ=255)
                                                                       ttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGGTTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCa                                                                              >  2:1448649‑M2/78‑149 (MQ=255)
                                                                         gattgatgccgatcttcttgacctcgatcagtgtccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCAGATTATTGTGGCGGCCGAAGACAACTTACTGAAAGGCTCGGCGGCACAAGCGGTACAGTGCGCCAat                                                                            <  2:1003574‑M2/74‑1 (MQ=255)
                                                                         gattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACGAGCGGGACAGTGCGCCAat                                                                            >  1:246489‑M2/76‑149 (MQ=255)
                                                                           ttgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAGGGCGCGGTGGCCCAAGCGGTACAGTGCgccaaagt                                                                          >  1:639315‑M2/74‑146 (MQ=255)
                                                                             gatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGGGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTc                                                                        <  2:1459564‑M2/78‑1 (MQ=255)
                                                                                 ccggtcttcttgacctcaatcggtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGttt                                                                    <  1:588206‑M2/82‑1 (MQ=255)
                                                                                 ccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGttt                                                                    <  2:815052‑M2/82‑1 (MQ=255)
                                                                                   gatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCg                                                                  >  2:456120‑M2/66‑149 (MQ=255)
                                                                                    atcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCgg                                                                 <  2:1344538‑M2/85‑1 (MQ=255)
                                                                                    atcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCgg                                                                 <  2:635924‑M2/85‑1 (MQ=255)
                                                                                    atcttcttgacctcaatcaggggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCgg                                                                 <  1:182091‑M2/85‑1 (MQ=255)
                                                                                      cttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGCTTCTTGTGGCGACCGAAGACAACTTACTGAAAGACGAGGAGGCACAAGCGGTACATTGCGCAAATATTCGTATCGGCt                                                               >  1:718158‑M2/63‑149 (MQ=255)
                                                                                          ttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTAGTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACGAGCGGTACAGTGCGCGAATATGCGTttcggcgaggc                                                           >  1:346862‑M2/59‑144 (MQ=255)
                                                                                            gacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCgg                                                         <  2:1037040‑M2/93‑1 (MQ=255)
                                                                                            gacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCgg                                                         >  1:1343641‑M2/57‑149 (MQ=255)
                                                                                               ctcgatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCCAAGCGGaaa                                                      >  1:74855‑M2/54‑149 (MQ=255)
                                                                                               ctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCCATATTCGTTTCGGCTATGCGGaaa                                                      >  1:429131‑M2/54‑149 (MQ=255)
                                                                                               ctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGaaa                                                      >  1:243227‑M2/54‑149 (MQ=255)
                                                                                               ctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGaaa                                                      >  2:779732‑M2/54‑149 (MQ=255)
                                                                                               ctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGaaa                                                      >  2:1282749‑M2/54‑149 (MQ=255)
                                                                                               ctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGAGTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGGTATTCggaga                                                      >  1:221662‑M2/54‑147 (MQ=255)
                                                                                                tcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAAc                                                     >  2:23939‑M2/53‑149 (MQ=255)
                                                                                                   atcaggggccggtgatcaacgcccccagcggggtgatgggtgcgtggcgAGCATCTGATTAGTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGTCAATATTCGTTTCGGCTATGCGGAAACGCa                                                  <  2:861464‑M2/100‑1 (MQ=255)
                                                                                                         ggccggtgatcaacgccgccagcggcgtgggcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTctct                                            <  2:6950‑M2/106‑1 (MQ=255)
                                                                                                         ggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTctct                                            <  2:754822‑M2/106‑1 (MQ=255)
                                                                                                          gccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGTAACGCAGTCTCtt                                           <  2:1126437‑M2/107‑1 (MQ=255)
                                                                                                          gccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCtt                                           <  2:110362‑M2/107‑1 (MQ=255)
                                                                                                           ccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTa                                          <  1:517501‑M2/108‑1 (MQ=255)
                                                                                                                gatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTaa                                     <  2:1348391‑M2/113‑1 (MQ=255)
                                                                                                                gatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTaa                                     <  1:868913‑M2/113‑1 (MQ=255)
                                                                                                                gatcaacgccaccagcggcgtgagcggggcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTCCTGAAAGGCGCGGCCGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTaa                                     <  1:1065465‑M2/113‑1 (MQ=255)
                                                                                                                 atcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAg                                    <  2:589087‑M2/114‑1 (MQ=255)
                                                                                                                  ttaacgccagcagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAgg                                   <  2:1250019‑M2/115‑1 (MQ=255)
                                                                                                                  tcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATttaatg                                   <  1:521999‑M2/115‑3 (MQ=255)
                                                                                                                  ctcacgccgctggtggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCCAGCGGCGGTTCGGCTATGCGGCAACGCAGTCTCTTATTTAAgg                                   >  2:716394‑M2/35‑149 (MQ=255)
                                                                                                                  ctcacgccgctggtggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAgg                                   >  2:404100‑M2/35‑149 (MQ=255)
                                                                                                                   tcacgccgctggtggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTGATTTAagga                                  >  2:20010‑M2/34‑148 (MQ=255)
                                                                                                                   caacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTCGTGTTTGGTGTGGTGGCTTGAGTGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAggg                                  >  2:1487977‑M2/34‑149 (MQ=255)
                                                                                                                     acgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCGGGCTCCTCTTTAAGGGTg                                >  1:24867‑M2/32‑149 (MQ=255)
                                                                                                                     acgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTg                                <  2:917488‑M2/118‑1 (MQ=255)
                                                                                                                     acgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTg                                >  1:1192087‑M2/32‑149 (MQ=255)
                                                                                                                     acgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGGCCCTTGTTTAAGGGTg                                >  1:847582‑M2/32‑149 (MQ=255)
                                                                                                                         caccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAat                            >  2:647751‑M2/28‑149 (MQ=255)
                                                                                                                         caccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCGTGTTTAAGGGTGCAat                            >  2:948795‑M2/28‑149 (MQ=255)
                                                                                                                            cagcggcgtgagcggtgcagggcgCGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAGGGTTGCAatgat                         <  1:1103609‑M2/125‑1 (MQ=255)
                                                                                                                            cagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAatgat                         <  1:779732‑M2/125‑1 (MQ=255)
                                                                                                                               cggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGaa                      <  1:1521247‑M2/128‑1 (MQ=255)
                                                                                                                               cggcgtgagcggtgcagggcgAGCATCTGATTATTGGGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGaa                      <  2:705772‑M2/128‑1 (MQ=255)
                                                                                                                                ggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCCGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGAAt                     >  1:718710‑M2/21‑149 (MQ=255)
                                                                                                                                   gtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATCTAAGGGTGCAATGATGAATCCa                  >  2:1444047‑M2/18‑149 (MQ=255)
                                                                                                                                   gtgagcggtgcAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGAATCTGGGGCAGACATTCTGGTCGGATCTTCACAAACGCAGTCTCTTCTTTAAGGTTGCAATGATGAATCCa                  <  1:1165885/139‑1 (MQ=255)
                                                                                                                                       gcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACGGCAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGGCTCTTCTTTAAGGGGGCACGGGGGAAGCcattac              >  1:942402‑M2/14‑148 (MQ=255)
                                                                                                                                        cggtgcAGGGCGTGCATCTGATTATTGTGGCGACCGACGACAACTTACTGAAAGGAGACGCGGCTCAAGCGGTTCTGCTCGCCGATATTCGTTGCGGCTTTGCTGAAACGCAGTCTCTTATTTAAGGATGCAATGATGAATCCattaat             >  2:1143640/6‑149 (MQ=255)
                                                                                                                                         ggtgcagggcgAGCATCTTATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTCGGGGGGCAATGATGACTCCataaatt            <  1:772057‑M2/138‑1 (MQ=255)
                                                                                                                                         ggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGAATCCattaatt            <  2:1400700‑M2/138‑1 (MQ=255)
                                                                                                                                         ggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGAATCCattaatt            <  1:88507‑M2/138‑1 (MQ=255)
                                                                                                                                         ggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGAATCCattaatt            >  2:979805‑M2/12‑149 (MQ=255)
                                                                                                                                          gtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGAATCCattaatta           <  2:1343641‑M2/139‑1 (MQ=255)
                                                                                                                                             cagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGAATCCATTAATTATCa        <  1:1387572‑M2/142‑1 (MQ=255)
                                                                                                                                                ggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGAGAGCAAAGATAAATCCATTAATTATCAAAc     >  2:1450601‑M2/5‑149 (MQ=255)
                                                                                                                                                 gcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGGGGCGGCAGGAGCGGTGCAGTTCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTCATTGAAGTGTGCCATGATGGATCCGTTAattatccacct    >  1:423379‑M2/4‑144 (MQ=255)
                                                                                                                                                  cgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTGAGGGTGCAATGATGAATCCATTAATTATCAAACTg   >  1:1522029‑M2/3‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
TCGGGTGTGACCCAGGCGCAAGTCGCGCAAGTGTTACAGCAGGCGTATGCCCATAAACCGCTGGTGCGGCTGTATGACAAAGGCGTTCCGGCGCTGAAAAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGAATCCATTAATTATCAAACTGG  >  CP009273/4145673‑4145968

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: